RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 FOXO3O43524 673 aa33.04■■■□□ 2.88
TNFRSF4-203ENST00000497869 DDX17Q92841 729 aaKnown RBP33.02■■■□□ 2.88
TNFRSF4-203ENST00000497869 BRINP3Q76B58 766 aa33.01■■■□□ 2.87
TNFRSF4-203ENST00000497869 XPCQ01831 940 aaPredicted RBP32.99■■■□□ 2.87
TNFRSF4-203ENST00000497869 NSD2O96028 1365 aa32.99■■■□□ 2.87
TNFRSF4-203ENST00000497869 MYBBP1AQ9BQG0 1328 aaKnown RBP32.97■■■□□ 2.87
TNFRSF4-203ENST00000497869 CCER2I3L3R5 266 aa32.97■■■□□ 2.87
TNFRSF4-203ENST00000497869 PSME1Q06323 249 aa32.95■■■□□ 2.87
TNFRSF4-203ENST00000497869 MORC1Q86VD1 984 aa32.95■■■□□ 2.87
TNFRSF4-203ENST00000497869 KIF1AQ12756 1690 aa32.95■■■□□ 2.86
TNFRSF4-203ENST00000497869 PPP2R1AP30153 589 aa32.94■■■□□ 2.86
TNFRSF4-203ENST00000497869 TNNT2P45379 298 aaPredicted RBP32.93■■■□□ 2.86
TNFRSF4-203ENST00000497869 KIF20BQ96Q89 1820 aa32.92■■■□□ 2.86
TNFRSF4-203ENST00000497869 TTC21AQ8NDW8 1320 aa32.92■■■□□ 2.86
TNFRSF4-203ENST00000497869 KRT28Q7Z3Y7 464 aa32.91■■■□□ 2.86
TNFRSF4-203ENST00000497869 FBLN1P23142 703 aa32.9■■■□□ 2.86
TNFRSF4-203ENST00000497869 OVOS2A0A0J9YW53 1432 aa32.89■■■□□ 2.86
TNFRSF4-203ENST00000497869 OVOS2Q6IE36 1432 aa32.89■■■□□ 2.86
TNFRSF4-203ENST00000497869 PIK3C2AO00443 1686 aa32.89■■■□□ 2.85
TNFRSF4-203ENST00000497869 PAK3O75914 559 aaPredicted RBP32.88■■■□□ 2.85
TNFRSF4-203ENST00000497869 BRD4O60885 1362 aaPredicted RBP32.86■■■□□ 2.85
TNFRSF4-203ENST00000497869 NUTM2GQ5VZR2 741 aa32.86■■■□□ 2.85
TNFRSF4-203ENST00000497869 NLRP13Q86W25 1043 aa32.86■■■□□ 2.85
TNFRSF4-203ENST00000497869 ANKRD26Q9UPS8 1709 aa32.86■■■□□ 2.85
TNFRSF4-203ENST00000497869 PXDNQ92626 1479 aa32.86■■■□□ 2.85
TNFRSF4-203ENST00000497869 TRPM3Q9HCF6 1732 aaPredicted RBP32.86■■■□□ 2.85
TNFRSF4-203ENST00000497869 USP31Q70CQ4 1352 aa32.85■■■□□ 2.85
TNFRSF4-203ENST00000497869 NPHP3Q7Z494 1330 aa32.85■■■□□ 2.85
TNFRSF4-203ENST00000497869 COG3Q96JB2 828 aa32.83■■■□□ 2.85
TNFRSF4-203ENST00000497869 ABTB2Q8N961 1025 aa32.82■■■□□ 2.85
TNFRSF4-203ENST00000497869 MRS2Q9HD23 443 aa32.82■■■□□ 2.85
TNFRSF4-203ENST00000497869 NLRP6P59044 892 aa32.8■■■□□ 2.84
TNFRSF4-203ENST00000497869 CERKQ8TCT0 537 aa32.8■■■□□ 2.84
TNFRSF4-203ENST00000497869 MARF1Q9Y4F3 1742 aaKnown RBP32.79■■■□□ 2.84
TNFRSF4-203ENST00000497869 SOS2Q07890 1332 aaPredicted RBP32.78■■■□□ 2.84
TNFRSF4-203ENST00000497869 SCAF1Q9H7N4 1312 aaKnown RBP32.77■■■□□ 2.84
TNFRSF4-203ENST00000497869 SBNO1A3KN83 1393 aa32.77■■■□□ 2.84
TNFRSF4-203ENST00000497869 MTHFSP49914 203 aa32.76■■■□□ 2.83
TNFRSF4-203ENST00000497869 ROBO1Q9Y6N7 1651 aa32.76■■■□□ 2.83
TNFRSF4-203ENST00000497869 POLKQ9UBT6 870 aa32.74■■■□□ 2.83
TNFRSF4-203ENST00000497869 IQSEC2Q5JU85 1478 aa32.74■■■□□ 2.83
TNFRSF4-203ENST00000497869 SPATA31A3Q5VYP0 1347 aa32.73■■■□□ 2.83
TNFRSF4-203ENST00000497869 ALS2Q96Q42 1657 aa32.73■■■□□ 2.83
TNFRSF4-203ENST00000497869 AATKQ6ZMQ8 1374 aa32.73■■■□□ 2.83
TNFRSF4-203ENST00000497869 NHSL1Q5SYE7 1610 aa32.73■■■□□ 2.83
TNFRSF4-203ENST00000497869 USP54Q70EL1 1684 aa32.72■■■□□ 2.83
TNFRSF4-203ENST00000497869 TOM1O60784 492 aa32.72■■■□□ 2.83
TNFRSF4-203ENST00000497869 SOX12O15370 315 aa32.71■■■□□ 2.83
TNFRSF4-203ENST00000497869 RRS1Q15050 365 aaKnown RBP32.71■■■□□ 2.83
TNFRSF4-203ENST00000497869 LMOD2Q6P5Q4 547 aa32.71■■■□□ 2.83
TNFRSF4-203ENST00000497869 TNS3Q68CZ2 1445 aa32.71■■■□□ 2.83
TNFRSF4-203ENST00000497869 UBAP1LF5GYI3 381 aa32.71■■■□□ 2.83
TNFRSF4-203ENST00000497869 PNISRQ8TF01 805 aaKnown RBP32.71■■■□□ 2.83
TNFRSF4-203ENST00000497869 EMILIN1Q9Y6C2 1016 aa32.71■■■□□ 2.83
TNFRSF4-203ENST00000497869 PIP4K2BP78356 416 aa32.69■■■□□ 2.82
TNFRSF4-203ENST00000497869 USP19O94966 1318 aa32.67■■■□□ 2.82
TNFRSF4-203ENST00000497869 PLEKHG5O94827 1062 aa32.66■■■□□ 2.82
TNFRSF4-203ENST00000497869 SMG6Q86US8 1419 aaKnown RBP32.66■■■□□ 2.82
TNFRSF4-203ENST00000497869 MED1Q15648 1581 aaPredicted RBP32.65■■■□□ 2.82
TNFRSF4-203ENST00000497869 AHDC1Q5TGY3 1603 aaPredicted RBP32.64■■■□□ 2.82
TNFRSF4-203ENST00000497869 FAM9BQ8IZU0 186 aa32.63■■■□□ 2.81
TNFRSF4-203ENST00000497869 PNPLA6Q8IY17 1366 aa32.63■■■□□ 2.81
TNFRSF4-203ENST00000497869 SLIT3O75094 1523 aa32.63■■■□□ 2.81
TNFRSF4-203ENST00000497869 MAP3K19Q56UN5 1328 aa32.62■■■□□ 2.81
TNFRSF4-203ENST00000497869 COL3A1P02461 1466 aaPredicted RBP32.62■■■□□ 2.81
TNFRSF4-203ENST00000497869 NFAT5O94916 1531 aa32.62■■■□□ 2.81
TNFRSF4-203ENST00000497869 PPM1GO15355 546 aaPredicted RBP32.61■■■□□ 2.81
TNFRSF4-203ENST00000497869 CABLES1Q8TDN4 633 aa32.61■■■□□ 2.81
TNFRSF4-203ENST00000497869 GCP02774 474 aa32.6■■■□□ 2.81
TNFRSF4-203ENST00000497869 MAP2P11137 1827 aaKnown RBP32.58■■■□□ 2.81
TNFRSF4-203ENST00000497869 ARHGEF10O15013 1369 aa32.58■■■□□ 2.81
TNFRSF4-203ENST00000497869 PEAK1Q9H792 1746 aa32.58■■■□□ 2.81
TNFRSF4-203ENST00000497869 INSRP06213 1382 aa32.57■■■□□ 2.8
TNFRSF4-203ENST00000497869 CDK12Q9NYV4 1490 aaPredicted RBP32.55■■■□□ 2.8
TNFRSF4-203ENST00000497869 KCNH5Q8NCM2 988 aa32.54■■■□□ 2.8
TNFRSF4-203ENST00000497869 YTHDC1Q96MU7 727 aaKnown RBP32.54■■■□□ 2.8
TNFRSF4-203ENST00000497869 SHPRHQ149N8 1683 aa32.53■■■□□ 2.8
TNFRSF4-203ENST00000497869 CRYBG1Q9Y4K1 1723 aa32.52■■■□□ 2.8
TNFRSF4-203ENST00000497869 HSP90AB2PQ58FF8 381 aa32.52■■■□□ 2.8
TNFRSF4-203ENST00000497869 COL16A1Q07092 1604 aaPredicted RBP32.52■■■□□ 2.8
TNFRSF4-203ENST00000497869 CFAP53Q96M91 514 aa32.51■■■□□ 2.8
TNFRSF4-203ENST00000497869 ADAMTS8Q9UP79 889 aa32.51■■■□□ 2.8
TNFRSF4-203ENST00000497869 ARHGEF25Q86VW2 580 aa32.5■■■□□ 2.79
TNFRSF4-203ENST00000497869 LRRC59Q96AG4 307 aaKnown RBP32.5■■■□□ 2.79
TNFRSF4-203ENST00000497869 PHRF1Q9P1Y6 1649 aaKnown RBP32.49■■■□□ 2.79
TNFRSF4-203ENST00000497869 HOXC9P31274 260 aa32.47■■■□□ 2.79
TNFRSF4-203ENST00000497869 IL13P35225 146 aa32.47■■■□□ 2.79
TNFRSF4-203ENST00000497869 ZC3H6P61129 1189 aaKnown RBP32.47■■■□□ 2.79
TNFRSF4-203ENST00000497869 PHLPP1O60346 1717 aa32.47■■■□□ 2.79
TNFRSF4-203ENST00000497869 FLT4P35916 1363 aa32.46■■■□□ 2.79
TNFRSF4-203ENST00000497869 DIAPH1O60610 1272 aaKnown RBP32.46■■■□□ 2.79
TNFRSF4-203ENST00000497869 AMPHP49418 695 aa32.46■■■□□ 2.79
TNFRSF4-203ENST00000497869 EIF4A2Q14240 407 aaKnown RBP32.44■■■□□ 2.78
TNFRSF4-203ENST00000497869 WDR43Q15061 677 aaKnown RBP eCLIP32.43■■■□□ 2.78
TNFRSF4-203ENST00000497869 ZBTB7CA1YPR0 619 aa32.43■■■□□ 2.78
TNFRSF4-203ENST00000497869 KIF24Q5T7B8 1368 aa32.42■■■□□ 2.78
TNFRSF4-203ENST00000497869 SENP3-EIF4A1A0A087X0R7 540 aa32.41■■■□□ 2.78
TNFRSF4-203ENST00000497869 IP6K1Q92551 441 aa32.41■■■□□ 2.78
TNFRSF4-203ENST00000497869 LTN1O94822 1766 aa32.41■■■□□ 2.78
TNFRSF4-203ENST00000497869 AXIN2Q9Y2T1 843 aa32.4■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms