RNA–Protein interactions for RNA: ENST00000497703.1

GARNL3-221, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-221ENST00000497703 ARXQ96QS3 562 aa13.49□□□□□ -0.25
GARNL3-221ENST00000497703 SERPINA10Q9UK55 444 aa13.49□□□□□ -0.25
GARNL3-221ENST00000497703 IRF5Q13568 498 aa13.48□□□□□ -0.25
GARNL3-221ENST00000497703 C1orf115Q9H7X2 142 aa13.48□□□□□ -0.25
GARNL3-221ENST00000497703 GGCXP38435 758 aa13.47□□□□□ -0.25
GARNL3-221ENST00000497703 NBPF14Q5TI25 921 aa13.47□□□□□ -0.25
GARNL3-221ENST00000497703 CCDC82Q8N4S0 544 aa13.46□□□□□ -0.25
GARNL3-221ENST00000497703 GPKOWQ92917 476 aaPredicted RBP eCLIP13.46□□□□□ -0.25
GARNL3-221ENST00000497703 S1PR4O95977 384 aa13.45□□□□□ -0.26
GARNL3-221ENST00000497703 SOX11P35716 441 aa13.45□□□□□ -0.26
GARNL3-221ENST00000497703 VAC14Q08AM6 782 aa13.45□□□□□ -0.26
GARNL3-221ENST00000497703 PLSCR2Q9NRY7 297 aa13.45□□□□□ -0.26
GARNL3-221ENST00000497703 EIF4G2P78344 907 aaKnown RBP eCLIP13.44□□□□□ -0.26
GARNL3-221ENST00000497703 NKX2-3Q8TAU0 364 aa13.44□□□□□ -0.26
GARNL3-221ENST00000497703 GLMNQ92990 594 aa13.44□□□□□ -0.26
GARNL3-221ENST00000497703 ITGBL1O95965 494 aaPredicted RBP13.43□□□□□ -0.26
GARNL3-221ENST00000497703 ZNF592Q92610 1267 aa13.43□□□□□ -0.26
GARNL3-221ENST00000497703 POM121CA8CG34 1229 aa13.42□□□□□ -0.26
GARNL3-221ENST00000497703 ZBBXA8MT70 800 aa13.42□□□□□ -0.26
GARNL3-221ENST00000497703 GPR37L1O60883 481 aa13.42□□□□□ -0.26
GARNL3-221ENST00000497703 PTK2Q05397 1052 aa13.42□□□□□ -0.26
GARNL3-221ENST00000497703 NR1H3Q13133 447 aa13.41□□□□□ -0.26
GARNL3-221ENST00000497703 SEMA3FQ13275 785 aa13.41□□□□□ -0.26
GARNL3-221ENST00000497703 HOMEZQ8IX15 550 aa13.41□□□□□ -0.26
GARNL3-221ENST00000497703 UNC93B1Q9H1C4 597 aa13.41□□□□□ -0.26
GARNL3-221ENST00000497703 FCF1Q9Y324 198 aaKnown RBP13.41□□□□□ -0.26
GARNL3-221ENST00000497703 HDGFL1Q5TGJ6 251 aa13.4□□□□□ -0.26
GARNL3-221ENST00000497703 GPSM3Q9Y4H4 160 aa13.4□□□□□ -0.26
GARNL3-221ENST00000497703 PDXDC2PQ6P474 469 aa13.39□□□□□ -0.27
GARNL3-221ENST00000497703 ZBTB24O43167 697 aaPredicted RBP13.38□□□□□ -0.27
GARNL3-221ENST00000497703 FBXO45P0C2W1 286 aa13.36□□□□□ -0.27
GARNL3-221ENST00000497703 ARHGAP9Q9BRR9 750 aa13.35□□□□□ -0.27
GARNL3-221ENST00000497703 AGERQ15109 404 aa13.34□□□□□ -0.27
GARNL3-221ENST00000497703 MCCD1P59942 119 aaPredicted RBP13.33□□□□□ -0.28
GARNL3-221ENST00000497703 MMRN1Q13201 1228 aa13.33□□□□□ -0.28
GARNL3-221ENST00000497703 PTCRAQ6ISU1 281 aaPredicted RBP13.33□□□□□ -0.28
GARNL3-221ENST00000497703 ZBTB33Q86T24 672 aa13.33□□□□□ -0.28
GARNL3-221ENST00000497703 BPHLQ86WA6 291 aaPredicted RBP13.32□□□□□ -0.28
GARNL3-221ENST00000497703 ANKLE1Q8NAG6 615 aa13.32□□□□□ -0.28
GARNL3-221ENST00000497703 ALG2Q9H553 416 aa13.32□□□□□ -0.28
GARNL3-221ENST00000497703 RNF223E7ERA6 249 aa13.3□□□□□ -0.28
GARNL3-221ENST00000497703 PPEF1O14829 653 aaPredicted RBP13.3□□□□□ -0.28
GARNL3-221ENST00000497703 BAP1Q92560 729 aa13.3□□□□□ -0.28
GARNL3-221ENST00000497703 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.29□□□□□ -0.28
GARNL3-221ENST00000497703 MAGEB6P1A0A0J9YX57 407 aa13.28□□□□□ -0.28
GARNL3-221ENST00000497703 PPP1R18Q6NYC8 613 aa13.28□□□□□ -0.28
GARNL3-221ENST00000497703 ZNF511Q8NB15 262 aa13.28□□□□□ -0.28
GARNL3-221ENST00000497703 PCDHB9Q9Y5E1 797 aa13.28□□□□□ -0.28
GARNL3-221ENST00000497703 LINC01559Q495D7 138 aa13.27□□□□□ -0.29
GARNL3-221ENST00000497703 ADAMTS19Q8TE59 1207 aa13.27□□□□□ -0.29
GARNL3-221ENST00000497703 CARD14Q9BXL6 1004 aa13.27□□□□□ -0.29
GARNL3-221ENST00000497703 SH3BP5LQ7L8J4 393 aa13.26□□□□□ -0.29
GARNL3-221ENST00000497703 ADAM32Q8TC27 787 aa13.26□□□□□ -0.29
GARNL3-221ENST00000497703 DZIP3Q86Y13 1208 aaKnown RBP13.25□□□□□ -0.29
GARNL3-221ENST00000497703 PPP1R12CQ9BZL4 782 aa13.23□□□□□ -0.29
GARNL3-221ENST00000497703 CD2BP2O95400 341 aaKnown RBP13.22□□□□□ -0.29
GARNL3-221ENST00000497703 RPIAP49247 311 aa13.22□□□□□ -0.29
GARNL3-221ENST00000497703 TRIM32Q13049 653 aa13.22□□□□□ -0.29
GARNL3-221ENST00000497703 SLFNL1Q499Z3 407 aa13.22□□□□□ -0.29
GARNL3-221ENST00000497703 SLC10A4Q96EP9 437 aa13.22□□□□□ -0.29
GARNL3-221ENST00000497703 PPP1R15AO75807 674 aaPredicted RBP13.2□□□□□ -0.3
GARNL3-221ENST00000497703 WNT7BP56706 349 aa13.2□□□□□ -0.3
GARNL3-221ENST00000497703 SH3RF1Q7Z6J0 888 aa13.2□□□□□ -0.3
GARNL3-221ENST00000497703 ACIN1Q9UKV3 1341 aaKnown RBP13.19□□□□□ -0.3
GARNL3-221ENST00000497703 PALM3A6NDB9 673 aaPredicted RBP13.19□□□□□ -0.3
GARNL3-221ENST00000497703 IFFO2Q5TF58 517 aa13.19□□□□□ -0.3
GARNL3-221ENST00000497703 NFATC2IPQ8NCF5 419 aa13.19□□□□□ -0.3
GARNL3-221ENST00000497703 FOXJ1Q92949 421 aa13.19□□□□□ -0.3
GARNL3-221ENST00000497703 TFIP11Q9UBB9 837 aaKnown RBP13.19□□□□□ -0.3
GARNL3-221ENST00000497703 RFX1P22670 979 aa13.18□□□□□ -0.3
GARNL3-221ENST00000497703 SH3BP2P78314 561 aa13.18□□□□□ -0.3
GARNL3-221ENST00000497703 OCSTAMPQ9BR26 566 aa13.18□□□□□ -0.3
GARNL3-221ENST00000497703 CEP126Q9P2H0 1117 aa13.18□□□□□ -0.3
GARNL3-221ENST00000497703 CDV3Q9UKY7 258 aaKnown RBP13.18□□□□□ -0.3
GARNL3-221ENST00000497703 LMOD1P29536 600 aaPredicted RBP13.17□□□□□ -0.3
GARNL3-221ENST00000497703 NBPF20Q3BBV1 942 aa13.17□□□□□ -0.3
GARNL3-221ENST00000497703 ATP9BO43861 1147 aa13.16□□□□□ -0.3
GARNL3-221ENST00000497703 ERFEQ4G0M1 354 aa13.16□□□□□ -0.3
GARNL3-221ENST00000497703 PLA2G2CQ5R387 149 aa13.16□□□□□ -0.3
GARNL3-221ENST00000497703 RNF135Q8IUD6 432 aa13.16□□□□□ -0.3
GARNL3-221ENST00000497703 UCN2Q96RP3 112 aa13.16□□□□□ -0.3
GARNL3-221ENST00000497703 VARSP26640 1264 aaKnown RBP13.15□□□□□ -0.3
GARNL3-221ENST00000497703 RNF20Q5VTR2 975 aa13.15□□□□□ -0.3
GARNL3-221ENST00000497703 EHBP1Q8NDI1 1231 aa13.15□□□□□ -0.3
GARNL3-221ENST00000497703 FAM174AQ8TBP5 190 aa13.15□□□□□ -0.3
GARNL3-221ENST00000497703 PBXIP1Q96AQ6 731 aa13.15□□□□□ -0.3
GARNL3-221ENST00000497703 SKIP12755 728 aa13.14□□□□□ -0.31
GARNL3-221ENST00000497703 PLA2G2EQ9NZK7 142 aa13.14□□□□□ -0.31
GARNL3-221ENST00000497703 CFAP70Q5T0N1 1121 aa13.13□□□□□ -0.31
GARNL3-221ENST00000497703 TBC1D9Q6ZT07 1266 aa13.13□□□□□ -0.31
GARNL3-221ENST00000497703 MAFBQ9Y5Q3 323 aaPredicted RBP13.12□□□□□ -0.31
GARNL3-221ENST00000497703 C4orf48Q5BLP8 95 aa13.11□□□□□ -0.31
GARNL3-221ENST00000497703 TRMT44Q8IYL2 757 aaKnown RBP13.11□□□□□ -0.31
GARNL3-221ENST00000497703 SLC19A1P41440 591 aa13.1□□□□□ -0.31
GARNL3-221ENST00000497703 CCDC125Q86Z20 511 aa13.1□□□□□ -0.31
GARNL3-221ENST00000497703 TRIM52Q96A61 297 aa13.1□□□□□ -0.31
GARNL3-221ENST00000497703 C1QTNF2Q9BXJ5 285 aa13.1□□□□□ -0.31
GARNL3-221ENST00000497703 USP17L5A8MUK1 530 aa13.09□□□□□ -0.31
GARNL3-221ENST00000497703 PIK3CDO00329 1044 aa13.09□□□□□ -0.31
GARNL3-221ENST00000497703 LZTS3O60299 673 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms