RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 CSPP1Q1MSJ5 1256 aa10.32□□□□□ -0.76
GGPS1-208ENST00000497327 TUSC1Q2TAM9 212 aa10.32□□□□□ -0.76
GGPS1-208ENST00000497327 MAP10Q9P2G4 905 aa10.31□□□□□ -0.76
GGPS1-208ENST00000497327 C11orf95C9JLR9 678 aaPredicted RBP10.3□□□□□ -0.76
GGPS1-208ENST00000497327 PER1O15534 1290 aaPredicted RBP10.29□□□□□ -0.76
GGPS1-208ENST00000497327 LILRB3O75022 631 aa10.29□□□□□ -0.76
GGPS1-208ENST00000497327 TLL2Q9Y6L7 1015 aa10.29□□□□□ -0.76
GGPS1-208ENST00000497327 SNRPBP14678 240 aaKnown RBP10.28□□□□□ -0.76
GGPS1-208ENST00000497327 CTHP32929 405 aa10.28□□□□□ -0.76
GGPS1-208ENST00000497327 TREML4Q6UXN2 200 aa10.28□□□□□ -0.76
GGPS1-208ENST00000497327 VARSP26640 1264 aaKnown RBP10.27□□□□□ -0.77
GGPS1-208ENST00000497327 TRIM47Q96LD4 638 aa10.27□□□□□ -0.77
GGPS1-208ENST00000497327 MPNDQ8N594 471 aa10.26□□□□□ -0.77
GGPS1-208ENST00000497327 WASF2Q9Y6W5 498 aa10.26□□□□□ -0.77
GGPS1-208ENST00000497327 RTL5Q5HYW3 569 aaPredicted RBP10.25□□□□□ -0.77
GGPS1-208ENST00000497327 CLK2P49760 499 aaKnown RBP10.24□□□□□ -0.77
GGPS1-208ENST00000497327 FOXJ1Q92949 421 aa10.24□□□□□ -0.77
GGPS1-208ENST00000497327 TRIM46Q7Z4K8 759 aa10.23□□□□□ -0.77
GGPS1-208ENST00000497327 SENP2Q9HC62 589 aa10.23□□□□□ -0.77
GGPS1-208ENST00000497327 NUTM2BA6NNL0 878 aaPredicted RBP10.22□□□□□ -0.77
GGPS1-208ENST00000497327 NUTM2EB1AL46 878 aaPredicted RBP10.22□□□□□ -0.77
GGPS1-208ENST00000497327 CAPN5O15484 640 aaPredicted RBP10.22□□□□□ -0.77
GGPS1-208ENST00000497327 C4orf48Q5BLP8 95 aa10.22□□□□□ -0.77
GGPS1-208ENST00000497327 NUTM2DQ5VT03 806 aaPredicted RBP10.22□□□□□ -0.77
GGPS1-208ENST00000497327 NUTM2AQ8IVF1 878 aaPredicted RBP10.22□□□□□ -0.77
GGPS1-208ENST00000497327 BMP1P13497 986 aa10.21□□□□□ -0.77
GGPS1-208ENST00000497327 NFX1Q12986 1120 aaKnown RBP10.21□□□□□ -0.77
GGPS1-208ENST00000497327 POLR3EQ9NVU0 708 aa10.21□□□□□ -0.77
GGPS1-208ENST00000497327 PLEKHG3A1L390 1219 aa10.2□□□□□ -0.78
GGPS1-208ENST00000497327 LCE2CQ5TA81 110 aa10.2□□□□□ -0.78
GGPS1-208ENST00000497327 ZCCHC6Q5VYS8 1495 aaKnown RBP10.2□□□□□ -0.78
GGPS1-208ENST00000497327 TSC1Q92574 1164 aa10.2□□□□□ -0.78
GGPS1-208ENST00000497327 KIFC2Q96AC6 838 aa10.2□□□□□ -0.78
GGPS1-208ENST00000497327 RSPH6AQ9H0K4 717 aa10.2□□□□□ -0.78
GGPS1-208ENST00000497327 NNTQ13423 1086 aa10.19□□□□□ -0.78
GGPS1-208ENST00000497327 FBXO31Q5XUX0 539 aaPredicted RBP10.19□□□□□ -0.78
GGPS1-208ENST00000497327 FAM174AQ8TBP5 190 aa10.19□□□□□ -0.78
GGPS1-208ENST00000497327 CDK15Q96Q40 435 aa10.19□□□□□ -0.78
GGPS1-208ENST00000497327 GPBP1L1Q9HC44 474 aaPredicted RBP10.19□□□□□ -0.78
GGPS1-208ENST00000497327 WFS1O76024 890 aa10.18□□□□□ -0.78
GGPS1-208ENST00000497327 KLF16Q9BXK1 252 aaPredicted RBP10.18□□□□□ -0.78
GGPS1-208ENST00000497327 ADH1CP00326 375 aa10.17□□□□□ -0.78
GGPS1-208ENST00000497327 HELBQ8NG08 1087 aaPredicted RBP10.17□□□□□ -0.78
GGPS1-208ENST00000497327 BCANQ96GW7 911 aa10.17□□□□□ -0.78
GGPS1-208ENST00000497327 KDM4CQ9H3R0 1056 aa10.17□□□□□ -0.78
GGPS1-208ENST00000497327 TIMP2P16035 220 aa10.16□□□□□ -0.78
GGPS1-208ENST00000497327 C1QTNF2Q9BXJ5 285 aa10.16□□□□□ -0.78
GGPS1-208ENST00000497327 SH3D19Q5HYK7 790 aa10.15□□□□□ -0.78
GGPS1-208ENST00000497327 SH3RF1Q7Z6J0 888 aa10.15□□□□□ -0.78
GGPS1-208ENST00000497327 FAM117AQ9C073 453 aa10.15□□□□□ -0.78
GGPS1-208ENST00000497327 TERTO14746 1132 aaKnown RBP10.14□□□□□ -0.79
GGPS1-208ENST00000497327 SKIV2LQ15477 1246 aaKnown RBP10.14□□□□□ -0.79
GGPS1-208ENST00000497327 SH3BP5LQ7L8J4 393 aa10.14□□□□□ -0.79
GGPS1-208ENST00000497327 BPHLQ86WA6 291 aaPredicted RBP10.14□□□□□ -0.79
GGPS1-208ENST00000497327 NR3C2P08235 984 aa10.13□□□□□ -0.79
GGPS1-208ENST00000497327 GRM5P41594 1212 aa10.13□□□□□ -0.79
GGPS1-208ENST00000497327 WDR4P57081 412 aaKnown RBP10.13□□□□□ -0.79
GGPS1-208ENST00000497327 CTDSPL2Q05D32 466 aa10.13□□□□□ -0.79
GGPS1-208ENST00000497327 PROCA1Q8NCQ7 364 aaPredicted RBP10.13□□□□□ -0.79
GGPS1-208ENST00000497327 ARMC2Q8NEN0 867 aa10.13□□□□□ -0.79
GGPS1-208ENST00000497327 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.13□□□□□ -0.79
GGPS1-208ENST00000497327 ARID5BQ14865 1188 aa10.11□□□□□ -0.79
GGPS1-208ENST00000497327 AGERQ15109 404 aa10.11□□□□□ -0.79
GGPS1-208ENST00000497327 NBPF14Q5TI25 921 aa10.11□□□□□ -0.79
GGPS1-208ENST00000497327 ZFP42Q96MM3 310 aa10.11□□□□□ -0.79
GGPS1-208ENST00000497327 NR5A1Q13285 461 aa10.1□□□□□ -0.79
GGPS1-208ENST00000497327 PPP2R2DQ66LE6 453 aa10.1□□□□□ -0.79
GGPS1-208ENST00000497327 MRPL14Q6P1L8 145 aaKnown RBP10.1□□□□□ -0.79
GGPS1-208ENST00000497327 DDRGK1Q96HY6 314 aa10.1□□□□□ -0.79
GGPS1-208ENST00000497327 WIPF1O43516 503 aa10.09□□□□□ -0.79
GGPS1-208ENST00000497327 TRMT44Q8IYL2 757 aaKnown RBP10.09□□□□□ -0.79
GGPS1-208ENST00000497327 LRRN4Q8WUT4 740 aa10.09□□□□□ -0.79
GGPS1-208ENST00000497327 ZFAND3Q9H8U3 227 aa10.09□□□□□ -0.79
GGPS1-208ENST00000497327 DCAF1Q9Y4B6 1507 aa10.08□□□□□ -0.8
GGPS1-208ENST00000497327 SLC24A1O60721 1099 aa10.08□□□□□ -0.8
GGPS1-208ENST00000497327 ITPKCQ96DU7 683 aa10.08□□□□□ -0.8
GGPS1-208ENST00000497327 MAP4K5Q9Y4K4 846 aa10.08□□□□□ -0.8
GGPS1-208ENST00000497327 ZIC2O95409 532 aaPredicted RBP10.07□□□□□ -0.8
GGPS1-208ENST00000497327 GPKOWQ92917 476 aaPredicted RBP eCLIP10.07□□□□□ -0.8
GGPS1-208ENST00000497327 ABCC9O60706 1549 aa10.07□□□□□ -0.8
GGPS1-208ENST00000497327 PURBQ96QR8 312 aaKnown RBP10.06□□□□□ -0.8
GGPS1-208ENST00000497327 NXF1Q9UBU9 619 aaKnown RBP10.06□□□□□ -0.8
GGPS1-208ENST00000497327 MAGEB6P1A0A0J9YX57 407 aa10.05□□□□□ -0.8
GGPS1-208ENST00000497327 ERFEQ4G0M1 354 aa10.05□□□□□ -0.8
GGPS1-208ENST00000497327 FSHRP23945 695 aa10.04□□□□□ -0.8
GGPS1-208ENST00000497327 CARD14Q9BXL6 1004 aa10.04□□□□□ -0.8
GGPS1-208ENST00000497327 FKBPLQ9UIM3 349 aa10.04□□□□□ -0.8
GGPS1-208ENST00000497327 NR6A1Q15406 480 aa10.03□□□□□ -0.8
GGPS1-208ENST00000497327 PDXDC2PQ6P474 469 aa10.03□□□□□ -0.8
GGPS1-208ENST00000497327 VASH1Q7L8A9 365 aaPredicted RBP10.03□□□□□ -0.8
GGPS1-208ENST00000497327 SCARF1Q14162 830 aa10.02□□□□□ -0.81
GGPS1-208ENST00000497327 OCSTAMPQ9BR26 566 aa10.02□□□□□ -0.81
GGPS1-208ENST00000497327 SOBPA7XYQ1 873 aa10.01□□□□□ -0.81
GGPS1-208ENST00000497327 NPAS3Q8IXF0 933 aa10.01□□□□□ -0.81
GGPS1-208ENST00000497327 MEIOBQ8N635 442 aa10.01□□□□□ -0.81
GGPS1-208ENST00000497327 H3BM21 787 aa10□□□□□ -0.81
GGPS1-208ENST00000497327 AP1G2O75843 785 aa10□□□□□ -0.81
GGPS1-208ENST00000497327 VEGFBP49765 207 aa10□□□□□ -0.81
GGPS1-208ENST00000497327 ARHGAP9Q9BRR9 750 aa10□□□□□ -0.81
GGPS1-208ENST00000497327 HMX1Q9NP08 348 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms