RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 PAK3O75914 559 aaPredicted RBP24.47■■□□□ 1.51
TRAPPC3-207ENST00000497251 CCDC61Q9Y6R9 512 aa24.47■■□□□ 1.51
TRAPPC3-207ENST00000497251 BRWD3Q6RI45 1802 aa24.47■■□□□ 1.51
TRAPPC3-207ENST00000497251 SPATA31A5Q5VU36 1347 aa24.45■■□□□ 1.5
TRAPPC3-207ENST00000497251 SPATA31A7Q8IWB4 1347 aa24.45■■□□□ 1.5
TRAPPC3-207ENST00000497251 PRDM11Q9NQV5 511 aa24.45■■□□□ 1.5
TRAPPC3-207ENST00000497251 ATP7BP35670 1465 aa24.45■■□□□ 1.5
TRAPPC3-207ENST00000497251 ITSN1Q15811 1721 aa24.44■■□□□ 1.5
TRAPPC3-207ENST00000497251 A0A0G2JS52 829 aa24.44■■□□□ 1.5
TRAPPC3-207ENST00000497251 MYT1Q01538 1121 aa24.44■■□□□ 1.5
TRAPPC3-207ENST00000497251 FAM98CQ17RN3 349 aaKnown RBP24.44■■□□□ 1.5
TRAPPC3-207ENST00000497251 CDK19Q9BWU1 502 aa24.44■■□□□ 1.5
TRAPPC3-207ENST00000497251 POLR3AO14802 1390 aaPredicted RBP24.43■■□□□ 1.5
TRAPPC3-207ENST00000497251 PLEKHG3A1L390 1219 aa24.43■■□□□ 1.5
TRAPPC3-207ENST00000497251 BAG6P46379 1132 aa24.43■■□□□ 1.5
TRAPPC3-207ENST00000497251 ARHGEF28Q8N1W1 1705 aaKnown RBP24.42■■□□□ 1.5
TRAPPC3-207ENST00000497251 KIAA1210Q9ULL0 1709 aa24.42■■□□□ 1.5
TRAPPC3-207ENST00000497251 NRAPQ86VF7 1730 aa24.41■■□□□ 1.5
TRAPPC3-207ENST00000497251 DEFB132Q7Z7B7 95 aa24.41■■□□□ 1.5
TRAPPC3-207ENST00000497251 NBPF8Q3BBV2 869 aa24.4■■□□□ 1.5
TRAPPC3-207ENST00000497251 BRD4O60885 1362 aaPredicted RBP24.39■■□□□ 1.49
TRAPPC3-207ENST00000497251 ACEP12821 1306 aa24.37■■□□□ 1.49
TRAPPC3-207ENST00000497251 KIAA0232Q92628 1395 aa24.36■■□□□ 1.49
TRAPPC3-207ENST00000497251 SPATA31A1Q5TZJ5 1347 aa24.35■■□□□ 1.49
TRAPPC3-207ENST00000497251 CRYBG1Q9Y4K1 1723 aa24.35■■□□□ 1.49
TRAPPC3-207ENST00000497251 ABTB2Q8N961 1025 aa24.33■■□□□ 1.49
TRAPPC3-207ENST00000497251 FAM196AQ6ZSG2 479 aa24.32■■□□□ 1.48
TRAPPC3-207ENST00000497251 NLRP13Q86W25 1043 aa24.32■■□□□ 1.48
TRAPPC3-207ENST00000497251 CENPJQ9HC77 1338 aaPredicted RBP24.32■■□□□ 1.48
TRAPPC3-207ENST00000497251 CPDO75976 1380 aa24.31■■□□□ 1.48
TRAPPC3-207ENST00000497251 DISP2A7MBM2 1401 aa24.31■■□□□ 1.48
TRAPPC3-207ENST00000497251 EVA1CP58658 441 aa24.31■■□□□ 1.48
TRAPPC3-207ENST00000497251 NBPF1Q3BBV0 1214 aa24.31■■□□□ 1.48
TRAPPC3-207ENST00000497251 BARGINQ6ZT62 677 aa24.31■■□□□ 1.48
TRAPPC3-207ENST00000497251 ZC3H6P61129 1189 aaKnown RBP24.3■■□□□ 1.48
TRAPPC3-207ENST00000497251 SRPK2P78362 688 aaKnown RBP24.29■■□□□ 1.48
TRAPPC3-207ENST00000497251 TOPAZ1Q8N9V7 1692 aa24.29■■□□□ 1.48
TRAPPC3-207ENST00000497251 THSD7AQ9UPZ6 1657 aa24.29■■□□□ 1.48
TRAPPC3-207ENST00000497251 USP19O94966 1318 aa24.29■■□□□ 1.48
TRAPPC3-207ENST00000497251 C11orf95C9JLR9 678 aaPredicted RBP24.28■■□□□ 1.48
TRAPPC3-207ENST00000497251 CHRNA2Q15822 529 aa24.28■■□□□ 1.48
TRAPPC3-207ENST00000497251 THRAP3Q9Y2W1 955 aaKnown RBP24.28■■□□□ 1.48
TRAPPC3-207ENST00000497251 STRN4Q9NRL3 753 aa24.27■■□□□ 1.48
TRAPPC3-207ENST00000497251 RGPD1P0DJD0 1748 aa24.27■■□□□ 1.48
TRAPPC3-207ENST00000497251 PHRF1Q9P1Y6 1649 aaKnown RBP24.25■■□□□ 1.47
TRAPPC3-207ENST00000497251 NUTM2GQ5VZR2 741 aa24.25■■□□□ 1.47
TRAPPC3-207ENST00000497251 PARD3Q8TEW0 1356 aa24.25■■□□□ 1.47
TRAPPC3-207ENST00000497251 PPIP5K1Q6PFW1 1433 aa24.25■■□□□ 1.47
TRAPPC3-207ENST00000497251 SSH2Q76I76 1423 aa24.25■■□□□ 1.47
TRAPPC3-207ENST00000497251 GCP02774 474 aa24.24■■□□□ 1.47
TRAPPC3-207ENST00000497251 EN1Q05925 392 aaPredicted RBP24.24■■□□□ 1.47
TRAPPC3-207ENST00000497251 TCP11L2Q8N4U5 519 aa24.24■■□□□ 1.47
TRAPPC3-207ENST00000497251 PDE3BQ13370 1112 aa24.23■■□□□ 1.47
TRAPPC3-207ENST00000497251 LRP5O75197 1615 aa24.21■■□□□ 1.47
TRAPPC3-207ENST00000497251 CABP2Q9NPB3 220 aa24.21■■□□□ 1.47
TRAPPC3-207ENST00000497251 EVC2Q86UK5 1308 aa24.2■■□□□ 1.46
TRAPPC3-207ENST00000497251 FAM182BQ5T319 152 aa24.2■■□□□ 1.46
TRAPPC3-207ENST00000497251 L3MBTL2Q969R5 705 aa24.19■■□□□ 1.46
TRAPPC3-207ENST00000497251 ZNF692Q9BU19 519 aaPredicted RBP24.19■■□□□ 1.46
TRAPPC3-207ENST00000497251 CAMTA1Q9Y6Y1 1673 aa24.18■■□□□ 1.46
TRAPPC3-207ENST00000497251 NRKQ7Z2Y5 1582 aa24.18■■□□□ 1.46
TRAPPC3-207ENST00000497251 LARP1Q6PKG0 1096 aaKnown RBP24.18■■□□□ 1.46
TRAPPC3-207ENST00000497251 CAMKK2Q96RR4 588 aa24.18■■□□□ 1.46
TRAPPC3-207ENST00000497251 CABP1Q9NZU7 370 aa24.18■■□□□ 1.46
TRAPPC3-207ENST00000497251 USP35Q9P2H5 1018 aa24.18■■□□□ 1.46
TRAPPC3-207ENST00000497251 TRIM37O94972 964 aa24.17■■□□□ 1.46
TRAPPC3-207ENST00000497251 USP6P35125 1406 aa24.17■■□□□ 1.46
TRAPPC3-207ENST00000497251 NLRP6P59044 892 aa24.16■■□□□ 1.46
TRAPPC3-207ENST00000497251 AATKQ6ZMQ8 1374 aa24.16■■□□□ 1.46
TRAPPC3-207ENST00000497251 LMO7Q8WWI1 1683 aa24.15■■□□□ 1.46
TRAPPC3-207ENST00000497251 PSDA5PKW4 1024 aaPredicted RBP24.15■■□□□ 1.46
TRAPPC3-207ENST00000497251 APBA3O96018 575 aa24.15■■□□□ 1.46
TRAPPC3-207ENST00000497251 EZH2Q15910 746 aaKnown RBP24.13■■□□□ 1.45
TRAPPC3-207ENST00000497251 CRB1P82279 1406 aa24.12■■□□□ 1.45
TRAPPC3-207ENST00000497251 TNS1Q9HBL0 1735 aaKnown RBP24.12■■□□□ 1.45
TRAPPC3-207ENST00000497251 COL5A2P05997 1499 aaPredicted RBP24.12■■□□□ 1.45
TRAPPC3-207ENST00000497251 QRICH2Q9H0J4 1663 aa24.11■■□□□ 1.45
TRAPPC3-207ENST00000497251 R3HDM1Q15032 1099 aaKnown RBP24.11■■□□□ 1.45
TRAPPC3-207ENST00000497251 KCNH5Q8NCM2 988 aa24.11■■□□□ 1.45
TRAPPC3-207ENST00000497251 NBPF14Q5TI25 921 aa24.1■■□□□ 1.45
TRAPPC3-207ENST00000497251 CDCA7Q9BWT1 371 aaPredicted RBP24.1■■□□□ 1.45
TRAPPC3-207ENST00000497251 ROCK2O75116 1388 aaKnown RBP24.09■■□□□ 1.45
TRAPPC3-207ENST00000497251 SLIT3O75094 1523 aa24.09■■□□□ 1.45
TRAPPC3-207ENST00000497251 TTC21AQ8NDW8 1320 aa24.09■■□□□ 1.45
TRAPPC3-207ENST00000497251 TTC21BQ7Z4L5 1316 aa24.05■■□□□ 1.44
TRAPPC3-207ENST00000497251 PARP4Q9UKK3 1724 aaKnown RBP24.04■■□□□ 1.44
TRAPPC3-207ENST00000497251 TRPM1Q7Z4N2 1603 aa24.04■■□□□ 1.44
TRAPPC3-207ENST00000497251 TOM1L2Q6ZVM7 507 aa24.04■■□□□ 1.44
TRAPPC3-207ENST00000497251 ARHGEF25Q86VW2 580 aa24.04■■□□□ 1.44
TRAPPC3-207ENST00000497251 WDR17Q8IZU2 1322 aa24.04■■□□□ 1.44
TRAPPC3-207ENST00000497251 SBNO2Q9Y2G9 1366 aa24.03■■□□□ 1.44
TRAPPC3-207ENST00000497251 OVOS2A0A0G2JMS6 1433 aa24.03■■□□□ 1.44
TRAPPC3-207ENST00000497251 OVOS2A0A0J9YW53 1432 aa24.03■■□□□ 1.44
TRAPPC3-207ENST00000497251 OVOS2Q6IE36 1432 aa24.03■■□□□ 1.44
TRAPPC3-207ENST00000497251 DDB1Q16531 1140 aa24.03■■□□□ 1.44
TRAPPC3-207ENST00000497251 SIN3AQ96ST3 1273 aa24.03■■□□□ 1.44
TRAPPC3-207ENST00000497251 PLSCR1O15162 318 aa24.02■■□□□ 1.44
TRAPPC3-207ENST00000497251 NEUROD1Q13562 356 aa24.01■■□□□ 1.43
TRAPPC3-207ENST00000497251 BCL9O00512 1426 aa24.01■■□□□ 1.43
TRAPPC3-207ENST00000497251 CPSF1Q10570 1443 aaKnown RBP24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms