RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 TSC1Q92574 1164 aa6.53□□□□□ -1.36
EXOSC3-208ENST00000496910 MAP10Q9P2G4 905 aa6.53□□□□□ -1.36
EXOSC3-208ENST00000496910 A6NJR5 290 aa6.52□□□□□ -1.37
EXOSC3-208ENST00000496910 CCNYL3P0C7X3 344 aa6.52□□□□□ -1.37
EXOSC3-208ENST00000496910 IRF5Q13568 498 aa6.52□□□□□ -1.37
EXOSC3-208ENST00000496910 NR6A1Q15406 480 aa6.52□□□□□ -1.37
EXOSC3-208ENST00000496910 PLA2G2CQ5R387 149 aa6.52□□□□□ -1.37
EXOSC3-208ENST00000496910 PTCRAQ6ISU1 281 aaPredicted RBP6.52□□□□□ -1.37
EXOSC3-208ENST00000496910 EMID1Q96A84 441 aaPredicted RBP6.52□□□□□ -1.37
EXOSC3-208ENST00000496910 EVA1BQ9NVM1 165 aa6.52□□□□□ -1.37
EXOSC3-208ENST00000496910 TBC1D2BQ9UPU7 963 aa6.52□□□□□ -1.37
EXOSC3-208ENST00000496910 RNF223E7ERA6 249 aa6.51□□□□□ -1.37
EXOSC3-208ENST00000496910 SUPT5HO00267 1087 aaKnown RBP6.51□□□□□ -1.37
EXOSC3-208ENST00000496910 NUDT12Q9BQG2 462 aa6.51□□□□□ -1.37
EXOSC3-208ENST00000496910 ZMYND15Q9H091 742 aa6.51□□□□□ -1.37
EXOSC3-208ENST00000496910 THOC2Q8NI27 1593 aaKnown RBP6.5□□□□□ -1.37
EXOSC3-208ENST00000496910 PPEF1O14829 653 aaPredicted RBP6.5□□□□□ -1.37
EXOSC3-208ENST00000496910 UBTFP17480 764 aaKnown RBP6.5□□□□□ -1.37
EXOSC3-208ENST00000496910 KCNH2Q12809 1159 aa6.5□□□□□ -1.37
EXOSC3-208ENST00000496910 GDPD2Q9HCC8 539 aa6.5□□□□□ -1.37
EXOSC3-208ENST00000496910 PPP1R18Q6NYC8 613 aa6.49□□□□□ -1.37
EXOSC3-208ENST00000496910 OCSTAMPQ9BR26 566 aa6.49□□□□□ -1.37
EXOSC3-208ENST00000496910 FCF1Q9Y324 198 aaKnown RBP6.49□□□□□ -1.37
EXOSC3-208ENST00000496910 ARAP1Q96P48 1450 aa6.48□□□□□ -1.37
EXOSC3-208ENST00000496910 ANKLE1Q8NAG6 615 aa6.48□□□□□ -1.37
EXOSC3-208ENST00000496910 NDUFB9Q9Y6M9 179 aa6.48□□□□□ -1.37
EXOSC3-208ENST00000496910 PROSER2Q86WR7 435 aaPredicted RBP6.47□□□□□ -1.37
EXOSC3-208ENST00000496910 A0A0G2JS52 829 aa6.46□□□□□ -1.38
EXOSC3-208ENST00000496910 TRAK2O60296 914 aa6.46□□□□□ -1.38
EXOSC3-208ENST00000496910 UNC93B1Q9H1C4 597 aa6.46□□□□□ -1.38
EXOSC3-208ENST00000496910 C1orf115Q9H7X2 142 aa6.46□□□□□ -1.38
EXOSC3-208ENST00000496910 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.46□□□□□ -1.38
EXOSC3-208ENST00000496910 PLA2G2EQ9NZK7 142 aa6.46□□□□□ -1.38
EXOSC3-208ENST00000496910 FKBPLQ9UIM3 349 aa6.46□□□□□ -1.38
EXOSC3-208ENST00000496910 APBB1O00213 710 aa6.44□□□□□ -1.38
EXOSC3-208ENST00000496910 CTHP32929 405 aa6.44□□□□□ -1.38
EXOSC3-208ENST00000496910 SH3BP5LQ7L8J4 393 aa6.44□□□□□ -1.38
EXOSC3-208ENST00000496910 ZC3H4Q9UPT8 1303 aaKnown RBP6.44□□□□□ -1.38
EXOSC3-208ENST00000496910 POM121CA8CG34 1229 aa6.43□□□□□ -1.38
EXOSC3-208ENST00000496910 ABL2P42684 1182 aa6.43□□□□□ -1.38
EXOSC3-208ENST00000496910 C4orf48Q5BLP8 95 aa6.43□□□□□ -1.38
EXOSC3-208ENST00000496910 LIAT1Q6ZQX7 453 aa6.43□□□□□ -1.38
EXOSC3-208ENST00000496910 SH3RF1Q7Z6J0 888 aa6.43□□□□□ -1.38
EXOSC3-208ENST00000496910 CCDC24Q8N4L8 307 aa6.43□□□□□ -1.38
EXOSC3-208ENST00000496910 ADAMTS19Q8TE59 1207 aa6.43□□□□□ -1.38
EXOSC3-208ENST00000496910 FBXO45P0C2W1 286 aa6.42□□□□□ -1.38
EXOSC3-208ENST00000496910 SKOR1P84550 965 aa6.42□□□□□ -1.38
EXOSC3-208ENST00000496910 GPKOWQ92917 476 aaPredicted RBP eCLIP6.42□□□□□ -1.38
EXOSC3-208ENST00000496910 RAD21O60216 631 aa6.41□□□□□ -1.38
EXOSC3-208ENST00000496910 GGCXP38435 758 aa6.41□□□□□ -1.38
EXOSC3-208ENST00000496910 SH3BP2P78314 561 aa6.41□□□□□ -1.38
EXOSC3-208ENST00000496910 TRIM26Q12899 539 aaPredicted RBP6.41□□□□□ -1.38
EXOSC3-208ENST00000496910 TRIM32Q13049 653 aa6.41□□□□□ -1.38
EXOSC3-208ENST00000496910 PDXDC2PQ6P474 469 aa6.41□□□□□ -1.38
EXOSC3-208ENST00000496910 ZNF511Q8NB15 262 aa6.41□□□□□ -1.38
EXOSC3-208ENST00000496910 BAP1Q92560 729 aa6.41□□□□□ -1.38
EXOSC3-208ENST00000496910 RPIAP49247 311 aa6.4□□□□□ -1.38
EXOSC3-208ENST00000496910 VAC14Q08AM6 782 aa6.4□□□□□ -1.38
EXOSC3-208ENST00000496910 ARMC2Q8NEN0 867 aa6.4□□□□□ -1.38
EXOSC3-208ENST00000496910 C1QTNF2Q9BXJ5 285 aa6.4□□□□□ -1.38
EXOSC3-208ENST00000496910 GPSM3Q9Y4H4 160 aa6.4□□□□□ -1.38
EXOSC3-208ENST00000496910 NR1H3Q13133 447 aa6.39□□□□□ -1.39
EXOSC3-208ENST00000496910 LINC01559Q495D7 138 aa6.39□□□□□ -1.39
EXOSC3-208ENST00000496910 NBPF14Q5TI25 921 aa6.39□□□□□ -1.39
EXOSC3-208ENST00000496910 FOXJ1Q92949 421 aa6.39□□□□□ -1.39
EXOSC3-208ENST00000496910 PLSCR2Q9NRY7 297 aa6.39□□□□□ -1.39
EXOSC3-208ENST00000496910 ARID3CA6NKF2 412 aa6.38□□□□□ -1.39
EXOSC3-208ENST00000496910 ZBBXA8MT70 800 aa6.38□□□□□ -1.39
EXOSC3-208ENST00000496910 NPM2Q86SE8 214 aaKnown RBP6.38□□□□□ -1.39
EXOSC3-208ENST00000496910 ALG2Q9H553 416 aa6.38□□□□□ -1.39
EXOSC3-208ENST00000496910 PRM3Q9NNZ6 103 aa6.38□□□□□ -1.39
EXOSC3-208ENST00000496910 WASHC4Q2M389 1173 aa6.37□□□□□ -1.39
EXOSC3-208ENST00000496910 ZNF330Q9Y3S2 320 aaPredicted RBP6.37□□□□□ -1.39
EXOSC3-208ENST00000496910 WNT7BP56706 349 aa6.36□□□□□ -1.39
EXOSC3-208ENST00000496910 SPRYD7Q5W111 196 aa6.36□□□□□ -1.39
EXOSC3-208ENST00000496910 PNMA1Q8ND90 353 aa6.36□□□□□ -1.39
EXOSC3-208ENST00000496910 ADAM32Q8TC27 787 aa6.36□□□□□ -1.39
EXOSC3-208ENST00000496910 ZNF777Q9ULD5 760 aaPredicted RBP6.36□□□□□ -1.39
EXOSC3-208ENST00000496910 ADGRL1O94910 1474 aa6.35□□□□□ -1.39
EXOSC3-208ENST00000496910 SLC19A1P41440 591 aa6.35□□□□□ -1.39
EXOSC3-208ENST00000496910 PTK2Q05397 1052 aa6.35□□□□□ -1.39
EXOSC3-208ENST00000496910 ERFEQ4G0M1 354 aa6.35□□□□□ -1.39
EXOSC3-208ENST00000496910 TRMT44Q8IYL2 757 aaKnown RBP6.35□□□□□ -1.39
EXOSC3-208ENST00000496910 GLMNQ92990 594 aa6.35□□□□□ -1.39
EXOSC3-208ENST00000496910 UCN2Q96RP3 112 aa6.35□□□□□ -1.39
EXOSC3-208ENST00000496910 ARHGAP9Q9BRR9 750 aa6.35□□□□□ -1.39
EXOSC3-208ENST00000496910 SRCAPQ6ZRS2 3230 aa6.35□□□□□ -1.39
EXOSC3-208ENST00000496910 SIAH2O43255 324 aa6.34□□□□□ -1.39
EXOSC3-208ENST00000496910 TRIM67Q6ZTA4 783 aa6.34□□□□□ -1.39
EXOSC3-208ENST00000496910 BPHLQ86WA6 291 aaPredicted RBP6.34□□□□□ -1.39
EXOSC3-208ENST00000496910 PKD2L1Q9P0L9 805 aa6.34□□□□□ -1.39
EXOSC3-208ENST00000496910 ZBTB24O43167 697 aaPredicted RBP6.33□□□□□ -1.4
EXOSC3-208ENST00000496910 PRKD2Q9BZL6 878 aa6.33□□□□□ -1.4
EXOSC3-208ENST00000496910 V9GY48 417 aaPredicted RBP6.33□□□□□ -1.4
EXOSC3-208ENST00000496910 WNT7AO00755 349 aa6.32□□□□□ -1.4
EXOSC3-208ENST00000496910 SOX11P35716 441 aa6.32□□□□□ -1.4
EXOSC3-208ENST00000496910 RC3H1Q5TC82 1133 aaKnown RBP6.32□□□□□ -1.4
EXOSC3-208ENST00000496910 HDGFL1Q5TGJ6 251 aa6.32□□□□□ -1.4
EXOSC3-208ENST00000496910 ZNF598Q86UK7 904 aaKnown RBP6.32□□□□□ -1.4
EXOSC3-208ENST00000496910 PHTF2Q8N3S3 785 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms