RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 HRCP23327 699 aa9.97□□□□□ -0.81
TRIM4-205ENST00000496896 SKIV2LQ15477 1246 aaKnown RBP9.97□□□□□ -0.81
TRIM4-205ENST00000496896 NEUROD2Q15784 382 aa9.97□□□□□ -0.81
TRIM4-205ENST00000496896 HPS1Q92902 700 aa9.97□□□□□ -0.81
TRIM4-205ENST00000496896 LIMD1Q9UGP4 676 aa9.97□□□□□ -0.81
TRIM4-205ENST00000496896 PLEKHG3A1L390 1219 aa9.96□□□□□ -0.82
TRIM4-205ENST00000496896 BRPF1P55201 1214 aaPredicted RBP9.96□□□□□ -0.82
TRIM4-205ENST00000496896 PRR7Q8TB68 274 aa9.96□□□□□ -0.82
TRIM4-205ENST00000496896 GOPCQ9HD26 462 aa9.96□□□□□ -0.82
TRIM4-205ENST00000496896 NXF1Q9UBU9 619 aaKnown RBP9.96□□□□□ -0.82
TRIM4-205ENST00000496896 LILRB3O75022 631 aa9.95□□□□□ -0.82
TRIM4-205ENST00000496896 GMPRP36959 345 aa9.95□□□□□ -0.82
TRIM4-205ENST00000496896 PTPRNQ16849 979 aa9.95□□□□□ -0.82
TRIM4-205ENST00000496896 LORP23490 312 aaPredicted RBP9.94□□□□□ -0.82
TRIM4-205ENST00000496896 IRF7Q92985 503 aa9.94□□□□□ -0.82
TRIM4-205ENST00000496896 NUDT12Q9BQG2 462 aa9.93□□□□□ -0.82
TRIM4-205ENST00000496896 QPCTQ16769 361 aa9.92□□□□□ -0.82
TRIM4-205ENST00000496896 NPAS3Q8IXF0 933 aa9.92□□□□□ -0.82
TRIM4-205ENST00000496896 CFAP99D6REC4 459 aa9.91□□□□□ -0.82
TRIM4-205ENST00000496896 CCNYL3P0C7X3 344 aa9.91□□□□□ -0.82
TRIM4-205ENST00000496896 CABLES1Q8TDN4 633 aa9.91□□□□□ -0.82
TRIM4-205ENST00000496896 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.91□□□□□ -0.82
TRIM4-205ENST00000496896 POLR3EQ9NVU0 708 aa9.91□□□□□ -0.82
TRIM4-205ENST00000496896 NUTM2BA6NNL0 878 aaPredicted RBP9.9□□□□□ -0.82
TRIM4-205ENST00000496896 NUTM2EB1AL46 878 aaPredicted RBP9.9□□□□□ -0.82
TRIM4-205ENST00000496896 CSPP1Q1MSJ5 1256 aa9.9□□□□□ -0.82
TRIM4-205ENST00000496896 NUTM2DQ5VT03 806 aaPredicted RBP9.9□□□□□ -0.82
TRIM4-205ENST00000496896 LYPD8Q6UX82 237 aa9.9□□□□□ -0.82
TRIM4-205ENST00000496896 NUTM2AQ8IVF1 878 aaPredicted RBP9.9□□□□□ -0.82
TRIM4-205ENST00000496896 EVA1BQ9NVM1 165 aa9.9□□□□□ -0.82
TRIM4-205ENST00000496896 PPP2R2DQ66LE6 453 aa9.88□□□□□ -0.83
TRIM4-205ENST00000496896 CCDC24Q8N4L8 307 aa9.88□□□□□ -0.83
TRIM4-205ENST00000496896 RC3H1Q5TC82 1133 aaKnown RBP9.87□□□□□ -0.83
TRIM4-205ENST00000496896 H3BM21 787 aa9.86□□□□□ -0.83
TRIM4-205ENST00000496896 WNT7BP56706 349 aa9.86□□□□□ -0.83
TRIM4-205ENST00000496896 KCNH2Q12809 1159 aa9.86□□□□□ -0.83
TRIM4-205ENST00000496896 SUZ12Q15022 739 aaKnown RBP9.86□□□□□ -0.83
TRIM4-205ENST00000496896 RTL5Q5HYW3 569 aaPredicted RBP9.86□□□□□ -0.83
TRIM4-205ENST00000496896 HELBQ8NG08 1087 aaPredicted RBP9.86□□□□□ -0.83
TRIM4-205ENST00000496896 PRKCSHP14314 528 aaPredicted RBP9.84□□□□□ -0.83
TRIM4-205ENST00000496896 VEGFBP49765 207 aa9.84□□□□□ -0.83
TRIM4-205ENST00000496896 PTCRAQ6ISU1 281 aaPredicted RBP9.84□□□□□ -0.83
TRIM4-205ENST00000496896 PROCA1Q8NCQ7 364 aaPredicted RBP9.84□□□□□ -0.83
TRIM4-205ENST00000496896 IL27Q8NEV9 243 aa9.84□□□□□ -0.83
TRIM4-205ENST00000496896 ALDH1A1P00352 501 aa9.83□□□□□ -0.84
TRIM4-205ENST00000496896 F12P00748 615 aaPredicted RBP9.83□□□□□ -0.84
TRIM4-205ENST00000496896 BMP1P13497 986 aa9.83□□□□□ -0.84
TRIM4-205ENST00000496896 SKOR1P84550 965 aa9.83□□□□□ -0.84
TRIM4-205ENST00000496896 TRIM46Q7Z4K8 759 aa9.82□□□□□ -0.84
TRIM4-205ENST00000496896 PCMTD1Q96MG8 357 aaPredicted RBP9.82□□□□□ -0.84
TRIM4-205ENST00000496896 UNC93B1Q9H1C4 597 aa9.82□□□□□ -0.84
TRIM4-205ENST00000496896 ERBB4Q15303 1308 aa9.82□□□□□ -0.84
TRIM4-205ENST00000496896 CAPN5O15484 640 aaPredicted RBP9.8□□□□□ -0.84
TRIM4-205ENST00000496896 PER1O15534 1290 aaPredicted RBP9.8□□□□□ -0.84
TRIM4-205ENST00000496896 TSC1Q92574 1164 aa9.79□□□□□ -0.84
TRIM4-205ENST00000496896 FBXO31Q5XUX0 539 aaPredicted RBP9.78□□□□□ -0.84
TRIM4-205ENST00000496896 CTHP32929 405 aa9.77□□□□□ -0.85
TRIM4-205ENST00000496896 SH3BP2P78314 561 aa9.76□□□□□ -0.85
TRIM4-205ENST00000496896 CTDSPL2Q05D32 466 aa9.76□□□□□ -0.85
TRIM4-205ENST00000496896 ZNF511Q8NB15 262 aa9.76□□□□□ -0.85
TRIM4-205ENST00000496896 ARMC2Q8NEN0 867 aa9.76□□□□□ -0.85
TRIM4-205ENST00000496896 MAP10Q9P2G4 905 aa9.76□□□□□ -0.85
TRIM4-205ENST00000496896 ATP1B4Q9UN42 357 aaPredicted RBP9.76□□□□□ -0.85
TRIM4-205ENST00000496896 WASF2Q9Y6W5 498 aa9.76□□□□□ -0.85
TRIM4-205ENST00000496896 RFC5P40937 340 aa9.75□□□□□ -0.85
TRIM4-205ENST00000496896 TMEM259Q4ZIN3 620 aa9.74□□□□□ -0.85
TRIM4-205ENST00000496896 BAP1Q92560 729 aa9.74□□□□□ -0.85
TRIM4-205ENST00000496896 EHBP1Q8NDI1 1231 aa9.73□□□□□ -0.85
TRIM4-205ENST00000496896 SIAH2O43255 324 aa9.72□□□□□ -0.85
TRIM4-205ENST00000496896 KCNMA1Q12791 1236 aa9.72□□□□□ -0.85
TRIM4-205ENST00000496896 GPKOWQ92917 476 aaPredicted RBP eCLIP9.72□□□□□ -0.85
TRIM4-205ENST00000496896 ZFP42Q96MM3 310 aa9.72□□□□□ -0.85
TRIM4-205ENST00000496896 AP1G2O75843 785 aa9.71□□□□□ -0.86
TRIM4-205ENST00000496896 VARSP26640 1264 aaKnown RBP9.71□□□□□ -0.86
TRIM4-205ENST00000496896 NBPF14Q5TI25 921 aa9.71□□□□□ -0.86
TRIM4-205ENST00000496896 MPNDQ8N594 471 aa9.71□□□□□ -0.86
TRIM4-205ENST00000496896 KCTD17Q8N5Z5 321 aa9.71□□□□□ -0.86
TRIM4-205ENST00000496896 SOCS7O14512 581 aa9.69□□□□□ -0.86
TRIM4-205ENST00000496896 USP17L8P0C7I0 530 aa9.69□□□□□ -0.86
TRIM4-205ENST00000496896 VSIG8P0DPA2 414 aa9.69□□□□□ -0.86
TRIM4-205ENST00000496896 LINC01559Q495D7 138 aa9.69□□□□□ -0.86
TRIM4-205ENST00000496896 LRRN4Q8WUT4 740 aa9.69□□□□□ -0.86
TRIM4-205ENST00000496896 ZC3H4Q9UPT8 1303 aaKnown RBP9.69□□□□□ -0.86
TRIM4-205ENST00000496896 BPHLQ86WA6 291 aaPredicted RBP9.68□□□□□ -0.86
TRIM4-205ENST00000496896 BANK1Q8NDB2 785 aa9.67□□□□□ -0.86
TRIM4-205ENST00000496896 SH3RF1Q7Z6J0 888 aa9.66□□□□□ -0.86
TRIM4-205ENST00000496896 PNMA1Q8ND90 353 aa9.66□□□□□ -0.86
TRIM4-205ENST00000496896 FKBPLQ9UIM3 349 aa9.66□□□□□ -0.86
TRIM4-205ENST00000496896 PDXDC2PQ6P474 469 aa9.65□□□□□ -0.86
TRIM4-205ENST00000496896 SH3BP5LQ7L8J4 393 aa9.65□□□□□ -0.86
TRIM4-205ENST00000496896 FAM174AQ8TBP5 190 aa9.65□□□□□ -0.86
TRIM4-205ENST00000496896 GSK3AP49840 483 aa9.64□□□□□ -0.87
TRIM4-205ENST00000496896 SCARF1Q14162 830 aa9.64□□□□□ -0.87
TRIM4-205ENST00000496896 NR6A1Q15406 480 aa9.64□□□□□ -0.87
TRIM4-205ENST00000496896 MRPL14Q6P1L8 145 aaKnown RBP9.64□□□□□ -0.87
TRIM4-205ENST00000496896 FOXJ1Q92949 421 aa9.64□□□□□ -0.87
TRIM4-205ENST00000496896 C1QTNF2Q9BXJ5 285 aa9.64□□□□□ -0.87
TRIM4-205ENST00000496896 GPSM3Q9Y4H4 160 aa9.64□□□□□ -0.87
TRIM4-205ENST00000496896 TMEM151AQ8N4L1 468 aa9.63□□□□□ -0.87
TRIM4-205ENST00000496896 CDK15Q96Q40 435 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms