RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 POLR3AO14802 1390 aaPredicted RBP28.06■■■□□ 2.08
COL20A1-208ENST00000496810 HAP1P54257 671 aaPredicted RBP28.04■■■□□ 2.08
COL20A1-208ENST00000496810 CABP2Q9NPB3 220 aa28.03■■■□□ 2.08
COL20A1-208ENST00000496810 PPIP5K1Q6PFW1 1433 aa28.02■■■□□ 2.08
COL20A1-208ENST00000496810 ACEP12821 1306 aa28.02■■■□□ 2.08
COL20A1-208ENST00000496810 RALGAPBQ86X10 1494 aa28.02■■■□□ 2.08
COL20A1-208ENST00000496810 PAK3O75914 559 aaPredicted RBP28.01■■■□□ 2.07
COL20A1-208ENST00000496810 UPF1Q92900 1129 aaKnown RBP eCLIP28.01■■■□□ 2.07
COL20A1-208ENST00000496810 CCDC61Q9Y6R9 512 aa28.01■■■□□ 2.07
COL20A1-208ENST00000496810 COL14A1Q05707 1796 aaKnown RBP28.01■■■□□ 2.07
COL20A1-208ENST00000496810 SRPK2P78362 688 aaKnown RBP28■■■□□ 2.07
COL20A1-208ENST00000496810 TONSLQ96HA7 1378 aa27.99■■■□□ 2.07
COL20A1-208ENST00000496810 UNC5CLQ8IV45 518 aa27.99■■■□□ 2.07
COL20A1-208ENST00000496810 BRWD3Q6RI45 1802 aa27.99■■■□□ 2.07
COL20A1-208ENST00000496810 PLEKHG3A1L390 1219 aa27.97■■■□□ 2.07
COL20A1-208ENST00000496810 NRKQ7Z2Y5 1582 aa27.97■■■□□ 2.07
COL20A1-208ENST00000496810 FAM83GA6ND36 823 aa27.96■■■□□ 2.07
COL20A1-208ENST00000496810 GJD4Q96KN9 370 aaPredicted RBP27.96■■■□□ 2.07
COL20A1-208ENST00000496810 NUTM2GQ5VZR2 741 aa27.94■■■□□ 2.06
COL20A1-208ENST00000496810 AKAP12Q02952 1782 aa27.93■■■□□ 2.06
COL20A1-208ENST00000496810 PIK3C2AO00443 1686 aa27.91■■■□□ 2.06
COL20A1-208ENST00000496810 EVC2Q86UK5 1308 aa27.89■■■□□ 2.05
COL20A1-208ENST00000496810 USP6P35125 1406 aa27.88■■■□□ 2.05
COL20A1-208ENST00000496810 VPS72Q15906 364 aa27.88■■■□□ 2.05
COL20A1-208ENST00000496810 CABP1Q9NZU7 370 aa27.88■■■□□ 2.05
COL20A1-208ENST00000496810 KIAA0232Q92628 1395 aa27.87■■■□□ 2.05
COL20A1-208ENST00000496810 CARD11Q9BXL7 1154 aa27.87■■■□□ 2.05
COL20A1-208ENST00000496810 BTG4Q9NY30 223 aa27.87■■■□□ 2.05
COL20A1-208ENST00000496810 ATAD2Q6PL18 1390 aa27.86■■■□□ 2.05
COL20A1-208ENST00000496810 LMO7Q8WWI1 1683 aa27.84■■■□□ 2.05
COL20A1-208ENST00000496810 SBNO2Q9Y2G9 1366 aa27.84■■■□□ 2.05
COL20A1-208ENST00000496810 MON2Q7Z3U7 1717 aa27.84■■■□□ 2.05
COL20A1-208ENST00000496810 SSH2Q76I76 1423 aa27.84■■■□□ 2.05
COL20A1-208ENST00000496810 CHRNA2Q15822 529 aa27.83■■■□□ 2.05
COL20A1-208ENST00000496810 PRDM11Q9NQV5 511 aa27.83■■■□□ 2.05
COL20A1-208ENST00000496810 CCDC9Q9Y3X0 531 aaKnown RBP27.83■■■□□ 2.05
COL20A1-208ENST00000496810 USP19O94966 1318 aa27.83■■■□□ 2.05
COL20A1-208ENST00000496810 ABTB2Q8N961 1025 aa27.82■■■□□ 2.04
COL20A1-208ENST00000496810 ZC3H6P61129 1189 aaKnown RBP27.81■■■□□ 2.04
COL20A1-208ENST00000496810 SLIT3O75094 1523 aa27.79■■■□□ 2.04
COL20A1-208ENST00000496810 THSD7AQ9UPZ6 1657 aa27.78■■■□□ 2.04
COL20A1-208ENST00000496810 CAMTA1Q9Y6Y1 1673 aa27.78■■■□□ 2.04
COL20A1-208ENST00000496810 SEPT12Q8IYM1 358 aa27.77■■■□□ 2.04
COL20A1-208ENST00000496810 CPSF1Q10570 1443 aaKnown RBP27.75■■■□□ 2.03
COL20A1-208ENST00000496810 BRD4O60885 1362 aaPredicted RBP27.75■■■□□ 2.03
COL20A1-208ENST00000496810 CD163L1Q9NR16 1453 aa27.75■■■□□ 2.03
COL20A1-208ENST00000496810 FAM98CQ17RN3 349 aaKnown RBP27.74■■■□□ 2.03
COL20A1-208ENST00000496810 CPDO75976 1380 aa27.73■■■□□ 2.03
COL20A1-208ENST00000496810 SPATA31A5Q5VU36 1347 aa27.73■■■□□ 2.03
COL20A1-208ENST00000496810 SPATA31A7Q8IWB4 1347 aa27.73■■■□□ 2.03
COL20A1-208ENST00000496810 ONECUT3O60422 494 aaPredicted RBP27.72■■■□□ 2.03
COL20A1-208ENST00000496810 NLRP13Q86W25 1043 aa27.71■■■□□ 2.03
COL20A1-208ENST00000496810 COL18A1P39060 1754 aa27.71■■■□□ 2.03
COL20A1-208ENST00000496810 GCP02774 474 aa27.7■■■□□ 2.02
COL20A1-208ENST00000496810 PCGF6Q9BYE7 350 aa27.7■■■□□ 2.02
COL20A1-208ENST00000496810 STRN4Q9NRL3 753 aa27.7■■■□□ 2.02
COL20A1-208ENST00000496810 TTC21BQ7Z4L5 1316 aa27.69■■■□□ 2.02
COL20A1-208ENST00000496810 A0A0G2JS52 829 aa27.68■■■□□ 2.02
COL20A1-208ENST00000496810 NLRP6P59044 892 aa27.68■■■□□ 2.02
COL20A1-208ENST00000496810 MYT1Q01538 1121 aa27.68■■■□□ 2.02
COL20A1-208ENST00000496810 TESK2Q96S53 571 aa27.68■■■□□ 2.02
COL20A1-208ENST00000496810 KTN1Q86UP2 1357 aaKnown RBP27.68■■■□□ 2.02
COL20A1-208ENST00000496810 USP54Q70EL1 1684 aa27.68■■■□□ 2.02
COL20A1-208ENST00000496810 RGPD5Q99666 1765 aa27.68■■■□□ 2.02
COL20A1-208ENST00000496810 COL5A2P05997 1499 aaPredicted RBP27.67■■■□□ 2.02
COL20A1-208ENST00000496810 SPATA31A1Q5TZJ5 1347 aa27.67■■■□□ 2.02
COL20A1-208ENST00000496810 NFAT5O94916 1531 aa27.66■■■□□ 2.02
COL20A1-208ENST00000496810 ST20-MTHFSA0A0A6YYL1 179 aa27.65■■■□□ 2.02
COL20A1-208ENST00000496810 SRCAPQ6ZRS2 3230 aa27.64■■■□□ 2.02
COL20A1-208ENST00000496810 KRT27Q7Z3Y8 459 aa27.64■■■□□ 2.02
COL20A1-208ENST00000496810 USP47Q96K76 1375 aa27.62■■■□□ 2.01
COL20A1-208ENST00000496810 BLMP54132 1417 aaPredicted RBP27.62■■■□□ 2.01
COL20A1-208ENST00000496810 ZBTB7CA1YPR0 619 aa27.62■■■□□ 2.01
COL20A1-208ENST00000496810 LARP1Q6PKG0 1096 aaKnown RBP27.62■■■□□ 2.01
COL20A1-208ENST00000496810 ZNF692Q9BU19 519 aaPredicted RBP27.62■■■□□ 2.01
COL20A1-208ENST00000496810 TMC1Q8TDI8 760 aa27.61■■■□□ 2.01
COL20A1-208ENST00000496810 SLC12A5Q9H2X9 1139 aa27.61■■■□□ 2.01
COL20A1-208ENST00000496810 ZRANB1Q9UGI0 708 aa27.61■■■□□ 2.01
COL20A1-208ENST00000496810 TTC21AQ8NDW8 1320 aa27.61■■■□□ 2.01
COL20A1-208ENST00000496810 A0A1W2PP64 1363 aa27.6■■■□□ 2.01
COL20A1-208ENST00000496810 WNK3Q9BYP7 1800 aa27.6■■■□□ 2.01
COL20A1-208ENST00000496810 FAM182BQ5T319 152 aa27.6■■■□□ 2.01
COL20A1-208ENST00000496810 USP35Q9P2H5 1018 aa27.6■■■□□ 2.01
COL20A1-208ENST00000496810 LTN1O94822 1766 aa27.59■■■□□ 2.01
COL20A1-208ENST00000496810 SOX12O15370 315 aa27.59■■■□□ 2.01
COL20A1-208ENST00000496810 TNS1Q9HBL0 1735 aaKnown RBP27.58■■■□□ 2.01
COL20A1-208ENST00000496810 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.58■■■□□ 2.01
COL20A1-208ENST00000496810 AATKQ6ZMQ8 1374 aa27.58■■■□□ 2.01
COL20A1-208ENST00000496810 RGPD1P0DJD0 1748 aa27.56■■■□□ 2
COL20A1-208ENST00000496810 PARP4Q9UKK3 1724 aaKnown RBP27.56■■■□□ 2
COL20A1-208ENST00000496810 EVA1CP58658 441 aa27.56■■■□□ 2
COL20A1-208ENST00000496810 NME9Q86XW9 330 aa27.56■■■□□ 2
COL20A1-208ENST00000496810 CLSPNQ9HAW4 1339 aa27.55■■■□□ 2
COL20A1-208ENST00000496810 EDC4Q6P2E9 1401 aaKnown RBP27.55■■■□□ 2
COL20A1-208ENST00000496810 DEFB132Q7Z7B7 95 aa27.54■■■□□ 2
COL20A1-208ENST00000496810 LRRC37A3O60309 1634 aa27.53■■■□□ 2
COL20A1-208ENST00000496810 CCDC125Q86Z20 511 aa27.53■■■□□ 2
COL20A1-208ENST00000496810 AXIN2Q9Y2T1 843 aa27.53■■■□□ 2
COL20A1-208ENST00000496810 MYOM1P52179 1685 aa27.52■■■□□ 2
COL20A1-208ENST00000496810 CRB1P82279 1406 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms