RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 KIAA1210Q9ULL0 1709 aa11.55□□□□□ -0.56
U2AF1-212ENST00000496462 WASHC2AQ641Q2 1341 aa11.55□□□□□ -0.56
U2AF1-212ENST00000496462 XIRP1Q702N8 1843 aaKnown RBP11.55□□□□□ -0.56
U2AF1-212ENST00000496462 KIF7Q2M1P5 1343 aa11.54□□□□□ -0.56
U2AF1-212ENST00000496462 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.54□□□□□ -0.56
U2AF1-212ENST00000496462 C1orf167Q5SNV9 1468 aa11.54□□□□□ -0.56
U2AF1-212ENST00000496462 CC2D1BQ5T0F9 858 aaKnown RBP11.54□□□□□ -0.56
U2AF1-212ENST00000496462 DIEXFQ68CQ4 756 aaKnown RBP11.54□□□□□ -0.56
U2AF1-212ENST00000496462 TNNT2P45379 298 aaPredicted RBP11.52□□□□□ -0.56
U2AF1-212ENST00000496462 MED1Q15648 1581 aaPredicted RBP11.52□□□□□ -0.56
U2AF1-212ENST00000496462 ANKRD36BQ8N2N9 1353 aa11.52□□□□□ -0.56
U2AF1-212ENST00000496462 TESK2Q96S53 571 aa11.52□□□□□ -0.57
U2AF1-212ENST00000496462 NSD2O96028 1365 aa11.52□□□□□ -0.57
U2AF1-212ENST00000496462 SPATA31A6Q5VVP1 1343 aa11.52□□□□□ -0.57
U2AF1-212ENST00000496462 TTC21BQ7Z4L5 1316 aa11.52□□□□□ -0.57
U2AF1-212ENST00000496462 NUTM2GQ5VZR2 741 aa11.52□□□□□ -0.57
U2AF1-212ENST00000496462 XRN1Q8IZH2 1706 aaKnown RBP11.51□□□□□ -0.57
U2AF1-212ENST00000496462 SOCS7O14512 581 aa11.51□□□□□ -0.57
U2AF1-212ENST00000496462 POTEAQ6S8J7 498 aa11.51□□□□□ -0.57
U2AF1-212ENST00000496462 SMG6Q86US8 1419 aaKnown RBP11.51□□□□□ -0.57
U2AF1-212ENST00000496462 PHLPP1O60346 1717 aa11.5□□□□□ -0.57
U2AF1-212ENST00000496462 ASXL1Q8IXJ9 1541 aa11.5□□□□□ -0.57
U2AF1-212ENST00000496462 TULP4Q9NRJ4 1543 aa11.49□□□□□ -0.57
U2AF1-212ENST00000496462 GGNBP2Q9H3C7 697 aa11.49□□□□□ -0.57
U2AF1-212ENST00000496462 CABLES1Q8TDN4 633 aa11.49□□□□□ -0.57
U2AF1-212ENST00000496462 TRPM1Q7Z4N2 1603 aa11.49□□□□□ -0.57
U2AF1-212ENST00000496462 ZNF772Q68DY9 489 aaPredicted RBP11.49□□□□□ -0.57
U2AF1-212ENST00000496462 AFF2P51816 1311 aa11.48□□□□□ -0.57
U2AF1-212ENST00000496462 RGS17Q9UGC6 210 aaPredicted RBP11.48□□□□□ -0.57
U2AF1-212ENST00000496462 SBNO1A3KN83 1393 aa11.48□□□□□ -0.57
U2AF1-212ENST00000496462 EDC4Q6P2E9 1401 aaKnown RBP11.48□□□□□ -0.57
U2AF1-212ENST00000496462 NSD3Q9BZ95 1437 aa11.48□□□□□ -0.57
U2AF1-212ENST00000496462 MAPK8IP3Q9UPT6 1336 aa11.47□□□□□ -0.57
U2AF1-212ENST00000496462 ADGRB1O14514 1584 aa11.47□□□□□ -0.57
U2AF1-212ENST00000496462 U2SURPO15042 1029 aaKnown RBP11.47□□□□□ -0.57
U2AF1-212ENST00000496462 ATP7BP35670 1465 aa11.46□□□□□ -0.57
U2AF1-212ENST00000496462 ZC3H6P61129 1189 aaKnown RBP11.46□□□□□ -0.57
U2AF1-212ENST00000496462 SOS2Q07890 1332 aaPredicted RBP11.46□□□□□ -0.57
U2AF1-212ENST00000496462 NALCNQ8IZF0 1738 aa11.46□□□□□ -0.58
U2AF1-212ENST00000496462 LTV1Q96GA3 475 aaPredicted RBP11.46□□□□□ -0.58
U2AF1-212ENST00000496462 QTRT2Q9H974 415 aaKnown RBP11.46□□□□□ -0.58
U2AF1-212ENST00000496462 NLRP2Q9NX02 1062 aa11.46□□□□□ -0.58
U2AF1-212ENST00000496462 CDC42BPGQ6DT37 1551 aa11.46□□□□□ -0.58
U2AF1-212ENST00000496462 HMGB2P26583 209 aaKnown RBP11.45□□□□□ -0.58
U2AF1-212ENST00000496462 RXRBP28702 533 aa11.45□□□□□ -0.58
U2AF1-212ENST00000496462 PNPLA6Q8IY17 1366 aa11.45□□□□□ -0.58
U2AF1-212ENST00000496462 RAPGEF4Q8WZA2 1011 aa11.45□□□□□ -0.58
U2AF1-212ENST00000496462 USP21Q9UK80 565 aa11.45□□□□□ -0.58
U2AF1-212ENST00000496462 SPATA31A3Q5VYP0 1347 aa11.45□□□□□ -0.58
U2AF1-212ENST00000496462 TOM1L2Q6ZVM7 507 aa11.45□□□□□ -0.58
U2AF1-212ENST00000496462 MRS2Q9HD23 443 aa11.45□□□□□ -0.58
U2AF1-212ENST00000496462 STRN4Q9NRL3 753 aa11.45□□□□□ -0.58
U2AF1-212ENST00000496462 NME9Q86XW9 330 aa11.44□□□□□ -0.58
U2AF1-212ENST00000496462 PRR36Q9H6K5 1346 aa11.44□□□□□ -0.58
U2AF1-212ENST00000496462 GCP02774 474 aa11.43□□□□□ -0.58
U2AF1-212ENST00000496462 IFT172Q9UG01 1749 aa11.43□□□□□ -0.58
U2AF1-212ENST00000496462 DIAPH1O60610 1272 aaKnown RBP11.43□□□□□ -0.58
U2AF1-212ENST00000496462 TNS3Q68CZ2 1445 aa11.42□□□□□ -0.58
U2AF1-212ENST00000496462 A0A1W2PP64 1363 aa11.42□□□□□ -0.58
U2AF1-212ENST00000496462 NPM2Q86SE8 214 aaKnown RBP11.42□□□□□ -0.58
U2AF1-212ENST00000496462 COL16A1Q07092 1604 aaPredicted RBP11.42□□□□□ -0.58
U2AF1-212ENST00000496462 SETD1AO15047 1707 aaKnown RBP11.42□□□□□ -0.58
U2AF1-212ENST00000496462 LRP6O75581 1613 aa11.41□□□□□ -0.58
U2AF1-212ENST00000496462 AHDC1Q5TGY3 1603 aaPredicted RBP11.41□□□□□ -0.58
U2AF1-212ENST00000496462 MYBBP1AQ9BQG0 1328 aaKnown RBP11.41□□□□□ -0.58
U2AF1-212ENST00000496462 USP6P35125 1406 aa11.41□□□□□ -0.58
U2AF1-212ENST00000496462 CDCA7Q9BWT1 371 aaPredicted RBP11.41□□□□□ -0.58
U2AF1-212ENST00000496462 U2AF1L5P0DN76 240 aaPredicted RBP11.4□□□□□ -0.58
U2AF1-212ENST00000496462 TATP17735 454 aaPredicted RBP11.4□□□□□ -0.58
U2AF1-212ENST00000496462 U2AF1Q01081 240 aaKnown RBP eCLIP11.4□□□□□ -0.58
U2AF1-212ENST00000496462 KNDC1Q76NI1 1749 aa11.4□□□□□ -0.58
U2AF1-212ENST00000496462 POLR3AO14802 1390 aaPredicted RBP11.4□□□□□ -0.58
U2AF1-212ENST00000496462 SF3B2Q13435 895 aaKnown RBP11.4□□□□□ -0.58
U2AF1-212ENST00000496462 RTF1Q92541 710 aaKnown RBP11.4□□□□□ -0.58
U2AF1-212ENST00000496462 PDE3BQ13370 1112 aa11.4□□□□□ -0.59
U2AF1-212ENST00000496462 TRPC5Q9UL62 973 aaPredicted RBP11.39□□□□□ -0.59
U2AF1-212ENST00000496462 FYB1O15117 783 aa11.39□□□□□ -0.59
U2AF1-212ENST00000496462 QRICH2Q9H0J4 1663 aa11.39□□□□□ -0.59
U2AF1-212ENST00000496462 C1orf141Q5JVX7 400 aa11.39□□□□□ -0.59
U2AF1-212ENST00000496462 C11orf95C9JLR9 678 aaPredicted RBP11.38□□□□□ -0.59
U2AF1-212ENST00000496462 RBM6P78332 1123 aaKnown RBP11.38□□□□□ -0.59
U2AF1-212ENST00000496462 LMOD3Q0VAK6 560 aa11.38□□□□□ -0.59
U2AF1-212ENST00000496462 CALD1Q05682 793 aaKnown RBP11.37□□□□□ -0.59
U2AF1-212ENST00000496462 PLEKHO1Q53GL0 409 aaPredicted RBP11.37□□□□□ -0.59
U2AF1-212ENST00000496462 CHMP4AQ9BY43 222 aa11.37□□□□□ -0.59
U2AF1-212ENST00000496462 CHRNA2Q15822 529 aa11.37□□□□□ -0.59
U2AF1-212ENST00000496462 USP35Q9P2H5 1018 aa11.37□□□□□ -0.59
U2AF1-212ENST00000496462 SPG7Q9UQ90 795 aa11.37□□□□□ -0.59
U2AF1-212ENST00000496462 KIF1AQ12756 1690 aa11.37□□□□□ -0.59
U2AF1-212ENST00000496462 MTHFSP49914 203 aa11.36□□□□□ -0.59
U2AF1-212ENST00000496462 NPC1L1Q9UHC9 1359 aa11.36□□□□□ -0.59
U2AF1-212ENST00000496462 BTG4Q9NY30 223 aa11.36□□□□□ -0.59
U2AF1-212ENST00000496462 ADGRB2O60241 1585 aa11.35□□□□□ -0.59
U2AF1-212ENST00000496462 HSP90AB1P08238 724 aaKnown RBP11.35□□□□□ -0.59
U2AF1-212ENST00000496462 IP6K1Q92551 441 aa11.35□□□□□ -0.59
U2AF1-212ENST00000496462 FLT4P35916 1363 aa11.35□□□□□ -0.59
U2AF1-212ENST00000496462 ANKRD24Q8TF21 1146 aa11.35□□□□□ -0.59
U2AF1-212ENST00000496462 RRS1Q15050 365 aaKnown RBP11.35□□□□□ -0.59
U2AF1-212ENST00000496462 FAM9BQ8IZU0 186 aa11.35□□□□□ -0.59
U2AF1-212ENST00000496462 KIF24Q5T7B8 1368 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms