RNA–Protein interactions for RNA: ENST00000496318.5

HLA-DQA1-207, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-207ENST00000496318 CABP2Q9NPB3 220 aa16.73■□□□□ 0.27
HLA-DQA1-207ENST00000496318 TRPC5Q9UL62 973 aaPredicted RBP16.73■□□□□ 0.27
HLA-DQA1-207ENST00000496318 COL14A1Q05707 1796 aaKnown RBP16.73■□□□□ 0.27
HLA-DQA1-207ENST00000496318 ARHGEF10O15013 1369 aa16.73■□□□□ 0.27
HLA-DQA1-207ENST00000496318 GPRASP1Q5JY77 1395 aa16.73■□□□□ 0.27
HLA-DQA1-207ENST00000496318 RALGAPBQ86X10 1494 aa16.73■□□□□ 0.27
HLA-DQA1-207ENST00000496318 AKAP12Q02952 1782 aa16.72■□□□□ 0.27
HLA-DQA1-207ENST00000496318 ROCK2O75116 1388 aaKnown RBP16.72■□□□□ 0.27
HLA-DQA1-207ENST00000496318 NRKQ7Z2Y5 1582 aa16.71■□□□□ 0.27
HLA-DQA1-207ENST00000496318 ACEP12821 1306 aa16.7■□□□□ 0.26
HLA-DQA1-207ENST00000496318 PPIP5K1Q6PFW1 1433 aa16.7■□□□□ 0.26
HLA-DQA1-207ENST00000496318 SRPK2P78362 688 aaKnown RBP16.7■□□□□ 0.26
HLA-DQA1-207ENST00000496318 TRIM26Q12899 539 aaPredicted RBP16.7■□□□□ 0.26
HLA-DQA1-207ENST00000496318 FAM83GA6ND36 823 aa16.69■□□□□ 0.26
HLA-DQA1-207ENST00000496318 PIK3C2AO00443 1686 aa16.69■□□□□ 0.26
HLA-DQA1-207ENST00000496318 POLR3AO14802 1390 aaPredicted RBP16.68■□□□□ 0.26
HLA-DQA1-207ENST00000496318 UNC5CLQ8IV45 518 aa16.68■□□□□ 0.26
HLA-DQA1-207ENST00000496318 RGPD5Q99666 1765 aa16.68■□□□□ 0.26
HLA-DQA1-207ENST00000496318 GJD4Q96KN9 370 aaPredicted RBP16.67■□□□□ 0.26
HLA-DQA1-207ENST00000496318 ADRA2BP18089 450 aa16.66■□□□□ 0.26
HLA-DQA1-207ENST00000496318 CHRNA2Q15822 529 aa16.65■□□□□ 0.26
HLA-DQA1-207ENST00000496318 CCDC9Q9Y3X0 531 aaKnown RBP16.65■□□□□ 0.26
HLA-DQA1-207ENST00000496318 CCDC61Q9Y6R9 512 aa16.65■□□□□ 0.26
HLA-DQA1-207ENST00000496318 MON2Q7Z3U7 1717 aa16.65■□□□□ 0.26
HLA-DQA1-207ENST00000496318 TONSLQ96HA7 1378 aa16.64■□□□□ 0.26
HLA-DQA1-207ENST00000496318 BTG4Q9NY30 223 aa16.64■□□□□ 0.25
HLA-DQA1-207ENST00000496318 KIAA0232Q92628 1395 aa16.64■□□□□ 0.25
HLA-DQA1-207ENST00000496318 LMO7Q8WWI1 1683 aa16.62■□□□□ 0.25
HLA-DQA1-207ENST00000496318 PLEKHG3A1L390 1219 aa16.62■□□□□ 0.25
HLA-DQA1-207ENST00000496318 ZC3H6P61129 1189 aaKnown RBP16.62■□□□□ 0.25
HLA-DQA1-207ENST00000496318 CABP1Q9NZU7 370 aa16.62■□□□□ 0.25
HLA-DQA1-207ENST00000496318 ATAD2Q6PL18 1390 aa16.61■□□□□ 0.25
HLA-DQA1-207ENST00000496318 USP6P35125 1406 aa16.61■□□□□ 0.25
HLA-DQA1-207ENST00000496318 THSD7AQ9UPZ6 1657 aa16.6■□□□□ 0.25
HLA-DQA1-207ENST00000496318 VPS72Q15906 364 aa16.6■□□□□ 0.25
HLA-DQA1-207ENST00000496318 PRDM11Q9NQV5 511 aa16.6■□□□□ 0.25
HLA-DQA1-207ENST00000496318 SEPT12Q8IYM1 358 aa16.59■□□□□ 0.25
HLA-DQA1-207ENST00000496318 CARD11Q9BXL7 1154 aa16.59■□□□□ 0.25
HLA-DQA1-207ENST00000496318 CAMTA1Q9Y6Y1 1673 aa16.59■□□□□ 0.25
HLA-DQA1-207ENST00000496318 A0A0G2JS52 829 aa16.58■□□□□ 0.24
HLA-DQA1-207ENST00000496318 MYT1Q01538 1121 aa16.58■□□□□ 0.24
HLA-DQA1-207ENST00000496318 FAM98CQ17RN3 349 aaKnown RBP16.58■□□□□ 0.24
HLA-DQA1-207ENST00000496318 ABTB2Q8N961 1025 aa16.58■□□□□ 0.24
HLA-DQA1-207ENST00000496318 EVC2Q86UK5 1308 aa16.58■□□□□ 0.24
HLA-DQA1-207ENST00000496318 COL18A1P39060 1754 aa16.58■□□□□ 0.24
HLA-DQA1-207ENST00000496318 ZBTB7CA1YPR0 619 aa16.57■□□□□ 0.24
HLA-DQA1-207ENST00000496318 STRN4Q9NRL3 753 aa16.57■□□□□ 0.24
HLA-DQA1-207ENST00000496318 WNK3Q9BYP7 1800 aa16.56■□□□□ 0.24
HLA-DQA1-207ENST00000496318 USP19O94966 1318 aa16.56■□□□□ 0.24
HLA-DQA1-207ENST00000496318 FAM182BQ5T319 152 aa16.56■□□□□ 0.24
HLA-DQA1-207ENST00000496318 LTN1O94822 1766 aa16.56■□□□□ 0.24
HLA-DQA1-207ENST00000496318 SLIT3O75094 1523 aa16.55■□□□□ 0.24
HLA-DQA1-207ENST00000496318 SSH2Q76I76 1423 aa16.55■□□□□ 0.24
HLA-DQA1-207ENST00000496318 TNS1Q9HBL0 1735 aaKnown RBP16.54■□□□□ 0.24
HLA-DQA1-207ENST00000496318 SRCAPQ6ZRS2 3230 aa16.54■□□□□ 0.24
HLA-DQA1-207ENST00000496318 CD163L1Q9NR16 1453 aa16.54■□□□□ 0.24
HLA-DQA1-207ENST00000496318 SPATA31A5Q5VU36 1347 aa16.53■□□□□ 0.24
HLA-DQA1-207ENST00000496318 SPATA31A7Q8IWB4 1347 aa16.53■□□□□ 0.24
HLA-DQA1-207ENST00000496318 SOX12O15370 315 aa16.53■□□□□ 0.24
HLA-DQA1-207ENST00000496318 PCGF6Q9BYE7 350 aa16.53■□□□□ 0.24
HLA-DQA1-207ENST00000496318 USP35Q9P2H5 1018 aa16.53■□□□□ 0.24
HLA-DQA1-207ENST00000496318 ZRANB1Q9UGI0 708 aa16.53■□□□□ 0.24
HLA-DQA1-207ENST00000496318 RGPD1P0DJD0 1748 aa16.5■□□□□ 0.23
HLA-DQA1-207ENST00000496318 TTC21BQ7Z4L5 1316 aa16.5■□□□□ 0.23
HLA-DQA1-207ENST00000496318 USP54Q70EL1 1684 aa16.5■□□□□ 0.23
HLA-DQA1-207ENST00000496318 GCP02774 474 aa16.5■□□□□ 0.23
HLA-DQA1-207ENST00000496318 NLRP6P59044 892 aa16.5■□□□□ 0.23
HLA-DQA1-207ENST00000496318 DEFB132Q7Z7B7 95 aa16.5■□□□□ 0.23
HLA-DQA1-207ENST00000496318 CPSF1Q10570 1443 aaKnown RBP16.5■□□□□ 0.23
HLA-DQA1-207ENST00000496318 KTN1Q86UP2 1357 aaKnown RBP16.5■□□□□ 0.23
HLA-DQA1-207ENST00000496318 SBNO2Q9Y2G9 1366 aa16.5■□□□□ 0.23
HLA-DQA1-207ENST00000496318 NFAT5O94916 1531 aa16.5■□□□□ 0.23
HLA-DQA1-207ENST00000496318 COL5A2P05997 1499 aaPredicted RBP16.49■□□□□ 0.23
HLA-DQA1-207ENST00000496318 LARP1Q6PKG0 1096 aaKnown RBP16.49■□□□□ 0.23
HLA-DQA1-207ENST00000496318 KRT27Q7Z3Y8 459 aa16.49■□□□□ 0.23
HLA-DQA1-207ENST00000496318 CPDO75976 1380 aa16.49■□□□□ 0.23
HLA-DQA1-207ENST00000496318 SPATA31A1Q5TZJ5 1347 aa16.48■□□□□ 0.23
HLA-DQA1-207ENST00000496318 ST20-MTHFSA0A0A6YYL1 179 aa16.48■□□□□ 0.23
HLA-DQA1-207ENST00000496318 ONECUT3O60422 494 aaPredicted RBP16.48■□□□□ 0.23
HLA-DQA1-207ENST00000496318 NLRP13Q86W25 1043 aa16.48■□□□□ 0.23
HLA-DQA1-207ENST00000496318 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.48■□□□□ 0.23
HLA-DQA1-207ENST00000496318 TMC1Q8TDI8 760 aa16.48■□□□□ 0.23
HLA-DQA1-207ENST00000496318 LRRC37A3O60309 1634 aa16.48■□□□□ 0.23
HLA-DQA1-207ENST00000496318 PARP4Q9UKK3 1724 aaKnown RBP16.48■□□□□ 0.23
HLA-DQA1-207ENST00000496318 SLC12A5Q9H2X9 1139 aa16.47■□□□□ 0.23
HLA-DQA1-207ENST00000496318 SBF2Q86WG5 1849 aa16.47■□□□□ 0.23
HLA-DQA1-207ENST00000496318 MYOM1P52179 1685 aa16.46■□□□□ 0.23
HLA-DQA1-207ENST00000496318 RGPD2P0DJD1 1756 aa16.46■□□□□ 0.23
HLA-DQA1-207ENST00000496318 TESK2Q96S53 571 aa16.46■□□□□ 0.23
HLA-DQA1-207ENST00000496318 BLMP54132 1417 aaPredicted RBP16.45■□□□□ 0.22
HLA-DQA1-207ENST00000496318 NME9Q86XW9 330 aa16.45■□□□□ 0.22
HLA-DQA1-207ENST00000496318 A0A1W2PP64 1363 aa16.45■□□□□ 0.22
HLA-DQA1-207ENST00000496318 USP47Q96K76 1375 aa16.44■□□□□ 0.22
HLA-DQA1-207ENST00000496318 EVA1CP58658 441 aa16.44■□□□□ 0.22
HLA-DQA1-207ENST00000496318 AXIN2Q9Y2T1 843 aa16.44■□□□□ 0.22
HLA-DQA1-207ENST00000496318 KAT6BQ8WYB5 2073 aa16.44■□□□□ 0.22
HLA-DQA1-207ENST00000496318 KIF20BQ96Q89 1820 aa16.43■□□□□ 0.22
HLA-DQA1-207ENST00000496318 BRD4O60885 1362 aaPredicted RBP16.43■□□□□ 0.22
HLA-DQA1-207ENST00000496318 PEAK1Q9H792 1746 aa16.42■□□□□ 0.22
HLA-DQA1-207ENST00000496318 AATKQ6ZMQ8 1374 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms