RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 YTHDC1Q96MU7 727 aaKnown RBP11.93□□□□□ -0.5
EPHA4-213ENST00000495693 RBM27Q9P2N5 1060 aaKnown RBP11.93□□□□□ -0.5
EPHA4-213ENST00000495693 DEPDC5O75140 1603 aa11.93□□□□□ -0.5
EPHA4-213ENST00000495693 BHMG1C9JSJ3 638 aaPredicted RBP11.92□□□□□ -0.5
EPHA4-213ENST00000495693 CDHR5Q9HBB8 845 aa11.92□□□□□ -0.5
EPHA4-213ENST00000495693 NPDC1Q9NQX5 325 aaPredicted RBP11.92□□□□□ -0.5
EPHA4-213ENST00000495693 CNTLNQ9NXG0 1405 aa11.92□□□□□ -0.5
EPHA4-213ENST00000495693 RABGEF1Q9UJ41 708 aa11.91□□□□□ -0.5
EPHA4-213ENST00000495693 SPATA31E1Q6ZUB1 1445 aa11.91□□□□□ -0.5
EPHA4-213ENST00000495693 TRAPPC8Q9Y2L5 1435 aa11.91□□□□□ -0.5
EPHA4-213ENST00000495693 NEURL4Q96JN8 1562 aa11.91□□□□□ -0.5
EPHA4-213ENST00000495693 TRIM6-TRIM34B2RNG4 842 aa11.9□□□□□ -0.5
EPHA4-213ENST00000495693 MMRN1Q13201 1228 aa11.9□□□□□ -0.5
EPHA4-213ENST00000495693 LAMC1P11047 1609 aa11.89□□□□□ -0.51
EPHA4-213ENST00000495693 NEO1Q92859 1461 aa11.89□□□□□ -0.51
EPHA4-213ENST00000495693 SCAPERQ9BY12 1400 aa11.89□□□□□ -0.51
EPHA4-213ENST00000495693 TULP1O00294 542 aaPredicted RBP11.89□□□□□ -0.51
EPHA4-213ENST00000495693 PRSS12P56730 875 aa11.89□□□□□ -0.51
EPHA4-213ENST00000495693 PTGDRQ13258 359 aa11.89□□□□□ -0.51
EPHA4-213ENST00000495693 PROX2Q3B8N5 592 aa11.89□□□□□ -0.51
EPHA4-213ENST00000495693 TET3O43151 1660 aa11.89□□□□□ -0.51
EPHA4-213ENST00000495693 CCDC7Q96M83 1385 aa11.89□□□□□ -0.51
EPHA4-213ENST00000495693 CDCA7LQ96GN5 454 aa11.88□□□□□ -0.51
EPHA4-213ENST00000495693 DHX29Q7Z478 1369 aaKnown RBP11.88□□□□□ -0.51
EPHA4-213ENST00000495693 USP47Q96K76 1375 aa11.88□□□□□ -0.51
EPHA4-213ENST00000495693 KDM5CP41229 1560 aa11.88□□□□□ -0.51
EPHA4-213ENST00000495693 CD109Q6YHK3 1445 aa11.87□□□□□ -0.51
EPHA4-213ENST00000495693 TRPM2O94759 1503 aa11.87□□□□□ -0.51
EPHA4-213ENST00000495693 PRDM15P57071 1507 aaPredicted RBP11.87□□□□□ -0.51
EPHA4-213ENST00000495693 NBPF8Q3BBV2 869 aa11.87□□□□□ -0.51
EPHA4-213ENST00000495693 RBM26Q5T8P6 1007 aaKnown RBP11.87□□□□□ -0.51
EPHA4-213ENST00000495693 TTC13Q8NBP0 860 aa11.87□□□□□ -0.51
EPHA4-213ENST00000495693 NBPF3Q9H094 633 aa11.87□□□□□ -0.51
EPHA4-213ENST00000495693 MYT1LQ9UL68 1186 aa11.87□□□□□ -0.51
EPHA4-213ENST00000495693 WASHC2AQ641Q2 1341 aa11.86□□□□□ -0.51
EPHA4-213ENST00000495693 VWDEQ8N2E2 1590 aa11.85□□□□□ -0.51
EPHA4-213ENST00000495693 MLH3Q9UHC1 1453 aa11.85□□□□□ -0.51
EPHA4-213ENST00000495693 TSKSQ9UJT2 592 aa11.85□□□□□ -0.51
EPHA4-213ENST00000495693 POGZQ7Z3K3 1410 aa11.85□□□□□ -0.51
EPHA4-213ENST00000495693 BCORL1Q5H9F3 1711 aa11.84□□□□□ -0.51
EPHA4-213ENST00000495693 NUTM2FA1L443 756 aa11.84□□□□□ -0.51
EPHA4-213ENST00000495693 FCHSD2O94868 740 aa11.84□□□□□ -0.51
EPHA4-213ENST00000495693 LAPTM4BQ86VI4 370 aa11.84□□□□□ -0.51
EPHA4-213ENST00000495693 CARD11Q9BXL7 1154 aa11.84□□□□□ -0.51
EPHA4-213ENST00000495693 KIAA1468Q9P260 1216 aa11.84□□□□□ -0.51
EPHA4-213ENST00000495693 GTF3C3Q9Y5Q9 886 aa11.84□□□□□ -0.51
EPHA4-213ENST00000495693 LMTK2Q8IWU2 1503 aa11.84□□□□□ -0.51
EPHA4-213ENST00000495693 PRAG1Q86YV5 1406 aa11.84□□□□□ -0.51
EPHA4-213ENST00000495693 HECW2Q9P2P5 1572 aa11.84□□□□□ -0.51
EPHA4-213ENST00000495693 SPHKAPQ2M3C7 1700 aa11.83□□□□□ -0.52
EPHA4-213ENST00000495693 GPRASP1Q5JY77 1395 aa11.83□□□□□ -0.52
EPHA4-213ENST00000495693 KTN1Q86UP2 1357 aaKnown RBP11.83□□□□□ -0.52
EPHA4-213ENST00000495693 PACS2Q86VP3 889 aa11.83□□□□□ -0.52
EPHA4-213ENST00000495693 HIRIP3Q9BW71 556 aaPredicted RBP11.83□□□□□ -0.52
EPHA4-213ENST00000495693 PTPRTO14522 1441 aa11.83□□□□□ -0.52
EPHA4-213ENST00000495693 GLI2P10070 1586 aa11.83□□□□□ -0.52
EPHA4-213ENST00000495693 TRPM1Q7Z4N2 1603 aa11.82□□□□□ -0.52
EPHA4-213ENST00000495693 RNF17Q9BXT8 1623 aaKnown RBP11.82□□□□□ -0.52
EPHA4-213ENST00000495693 AFAP1Q8N556 730 aa11.82□□□□□ -0.52
EPHA4-213ENST00000495693 DCAF11Q8TEB1 546 aa11.82□□□□□ -0.52
EPHA4-213ENST00000495693 CEP152O94986 1710 aa11.82□□□□□ -0.52
EPHA4-213ENST00000495693 A2MP01023 1474 aa11.82□□□□□ -0.52
EPHA4-213ENST00000495693 GPR37O15354 613 aa11.81□□□□□ -0.52
EPHA4-213ENST00000495693 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.81□□□□□ -0.52
EPHA4-213ENST00000495693 MRPL50Q8N5N7 158 aaKnown RBP11.81□□□□□ -0.52
EPHA4-213ENST00000495693 PLSCR2Q9NRY7 297 aa11.81□□□□□ -0.52
EPHA4-213ENST00000495693 FAM198AQ9UFP1 575 aa11.81□□□□□ -0.52
EPHA4-213ENST00000495693 PLA2R1Q13018 1463 aa11.81□□□□□ -0.52
EPHA4-213ENST00000495693 E9PCH4 1651 aa11.81□□□□□ -0.52
EPHA4-213ENST00000495693 HIC1Q14526 733 aa11.8□□□□□ -0.52
EPHA4-213ENST00000495693 ZNF326Q5BKZ1 582 aaKnown RBP11.8□□□□□ -0.52
EPHA4-213ENST00000495693 RNF166Q96A37 237 aaPredicted RBP11.8□□□□□ -0.52
EPHA4-213ENST00000495693 KIF7Q2M1P5 1343 aa11.8□□□□□ -0.52
EPHA4-213ENST00000495693 KIDINS220Q9ULH0 1771 aa11.79□□□□□ -0.52
EPHA4-213ENST00000495693 PADI6Q6TGC4 694 aa11.79□□□□□ -0.52
EPHA4-213ENST00000495693 EFCAB6Q5THR3 1501 aa11.79□□□□□ -0.52
EPHA4-213ENST00000495693 GPIHBP1Q8IV16 184 aa11.78□□□□□ -0.52
EPHA4-213ENST00000495693 NBPF26B4DH59 902 aa11.77□□□□□ -0.53
EPHA4-213ENST00000495693 KIF3BO15066 747 aa11.77□□□□□ -0.53
EPHA4-213ENST00000495693 MAP3K4Q9Y6R4 1608 aa11.77□□□□□ -0.53
EPHA4-213ENST00000495693 EIF3AQ14152 1382 aaKnown RBP11.77□□□□□ -0.53
EPHA4-213ENST00000495693 KIAA1210Q9ULL0 1709 aa11.77□□□□□ -0.53
EPHA4-213ENST00000495693 ZC3H13Q5T200 1668 aaKnown RBP11.76□□□□□ -0.53
EPHA4-213ENST00000495693 FAM98CQ17RN3 349 aaKnown RBP11.76□□□□□ -0.53
EPHA4-213ENST00000495693 CDCA8Q53HL2 280 aa11.76□□□□□ -0.53
EPHA4-213ENST00000495693 MYOM2P54296 1465 aa11.76□□□□□ -0.53
EPHA4-213ENST00000495693 MROH1Q8NDA8 1641 aa11.75□□□□□ -0.53
EPHA4-213ENST00000495693 TATDN2Q93075 761 aa11.75□□□□□ -0.53
EPHA4-213ENST00000495693 PRKRIP1Q9H875 184 aaPredicted RBP11.75□□□□□ -0.53
EPHA4-213ENST00000495693 GNPATO15228 680 aa11.74□□□□□ -0.53
EPHA4-213ENST00000495693 BCANQ96GW7 911 aa11.74□□□□□ -0.53
EPHA4-213ENST00000495693 WASHC2CQ9Y4E1 1318 aa11.74□□□□□ -0.53
EPHA4-213ENST00000495693 KIF1BO60333 1816 aa11.73□□□□□ -0.53
EPHA4-213ENST00000495693 LMOD2Q6P5Q4 547 aa11.73□□□□□ -0.53
EPHA4-213ENST00000495693 MADDQ8WXG6 1647 aa11.73□□□□□ -0.53
EPHA4-213ENST00000495693 CLTCL1P53675 1640 aa11.72□□□□□ -0.53
EPHA4-213ENST00000495693 GOLGA8CPA6NN73 597 aa11.72□□□□□ -0.53
EPHA4-213ENST00000495693 SEPT9Q9UHD8 586 aaPredicted RBP11.72□□□□□ -0.53
EPHA4-213ENST00000495693 RIMBP3CA6NJZ7 1639 aa11.71□□□□□ -0.53
EPHA4-213ENST00000495693 RIMBP3BA6NNM3 1639 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms