RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 RAB3GAP2Q9H2M9 1393 aa25.79■■□□□ 1.72
TMEM53-209ENST00000495630 PAK3O75914 559 aaPredicted RBP25.78■■□□□ 1.72
TMEM53-209ENST00000495630 ABCA3Q99758 1704 aa25.77■■□□□ 1.72
TMEM53-209ENST00000495630 TULP4Q9NRJ4 1543 aa25.75■■□□□ 1.71
TMEM53-209ENST00000495630 PRDM11Q9NQV5 511 aa25.75■■□□□ 1.71
TMEM53-209ENST00000495630 TRPM3Q9HCF6 1732 aaPredicted RBP25.74■■□□□ 1.71
TMEM53-209ENST00000495630 PSDA5PKW4 1024 aaPredicted RBP25.74■■□□□ 1.71
TMEM53-209ENST00000495630 HRCP23327 699 aa25.74■■□□□ 1.71
TMEM53-209ENST00000495630 EN1Q05925 392 aaPredicted RBP25.74■■□□□ 1.71
TMEM53-209ENST00000495630 NUDT16Q96DE0 195 aaKnown RBP25.73■■□□□ 1.71
TMEM53-209ENST00000495630 COL14A1Q05707 1796 aaKnown RBP25.73■■□□□ 1.71
TMEM53-209ENST00000495630 FAM182BQ5T319 152 aa25.72■■□□□ 1.71
TMEM53-209ENST00000495630 ALS2Q96Q42 1657 aa25.71■■□□□ 1.71
TMEM53-209ENST00000495630 NRAPQ86VF7 1730 aa25.71■■□□□ 1.71
TMEM53-209ENST00000495630 SPATA31A1Q5TZJ5 1347 aa25.68■■□□□ 1.7
TMEM53-209ENST00000495630 KIAA0232Q92628 1395 aa25.67■■□□□ 1.7
TMEM53-209ENST00000495630 FAM196AQ6ZSG2 479 aa25.66■■□□□ 1.7
TMEM53-209ENST00000495630 CDK19Q9BWU1 502 aa25.66■■□□□ 1.7
TMEM53-209ENST00000495630 LRP5O75197 1615 aa25.66■■□□□ 1.7
TMEM53-209ENST00000495630 CHRNA2Q15822 529 aa25.65■■□□□ 1.7
TMEM53-209ENST00000495630 CCDC61Q9Y6R9 512 aa25.65■■□□□ 1.7
TMEM53-209ENST00000495630 DISP2A7MBM2 1401 aa25.64■■□□□ 1.7
TMEM53-209ENST00000495630 ZC3H6P61129 1189 aaKnown RBP25.64■■□□□ 1.7
TMEM53-209ENST00000495630 NBPF8Q3BBV2 869 aa25.64■■□□□ 1.7
TMEM53-209ENST00000495630 STRN4Q9NRL3 753 aa25.64■■□□□ 1.7
TMEM53-209ENST00000495630 EVA1CP58658 441 aa25.63■■□□□ 1.69
TMEM53-209ENST00000495630 R3HDM1Q15032 1099 aaKnown RBP25.63■■□□□ 1.69
TMEM53-209ENST00000495630 PLEKHG3A1L390 1219 aa25.62■■□□□ 1.69
TMEM53-209ENST00000495630 EZH2Q15910 746 aaKnown RBP25.62■■□□□ 1.69
TMEM53-209ENST00000495630 ATP7BP35670 1465 aa25.61■■□□□ 1.69
TMEM53-209ENST00000495630 TRIM37O94972 964 aa25.61■■□□□ 1.69
TMEM53-209ENST00000495630 BARGINQ6ZT62 677 aa25.61■■□□□ 1.69
TMEM53-209ENST00000495630 CAMKK2Q96RR4 588 aa25.61■■□□□ 1.69
TMEM53-209ENST00000495630 ACEP12821 1306 aa25.61■■□□□ 1.69
TMEM53-209ENST00000495630 POLR3AO14802 1390 aaPredicted RBP25.6■■□□□ 1.69
TMEM53-209ENST00000495630 NUTM2GQ5VZR2 741 aa25.6■■□□□ 1.69
TMEM53-209ENST00000495630 THSD7AQ9UPZ6 1657 aa25.6■■□□□ 1.69
TMEM53-209ENST00000495630 RGPD1P0DJD0 1748 aa25.58■■□□□ 1.69
TMEM53-209ENST00000495630 CRYBG1Q9Y4K1 1723 aa25.57■■□□□ 1.68
TMEM53-209ENST00000495630 APBA3O96018 575 aa25.57■■□□□ 1.68
TMEM53-209ENST00000495630 PDE3BQ13370 1112 aa25.57■■□□□ 1.68
TMEM53-209ENST00000495630 ABTB2Q8N961 1025 aa25.57■■□□□ 1.68
TMEM53-209ENST00000495630 USP35Q9P2H5 1018 aa25.57■■□□□ 1.68
TMEM53-209ENST00000495630 PARD3Q8TEW0 1356 aa25.55■■□□□ 1.68
TMEM53-209ENST00000495630 NLRP13Q86W25 1043 aa25.53■■□□□ 1.68
TMEM53-209ENST00000495630 TCP11L2Q8N4U5 519 aa25.53■■□□□ 1.68
TMEM53-209ENST00000495630 ITSN1Q15811 1721 aa25.52■■□□□ 1.68
TMEM53-209ENST00000495630 LARP1Q6PKG0 1096 aaKnown RBP25.52■■□□□ 1.68
TMEM53-209ENST00000495630 THRAP3Q9Y2W1 955 aaKnown RBP25.52■■□□□ 1.68
TMEM53-209ENST00000495630 CPDO75976 1380 aa25.52■■□□□ 1.68
TMEM53-209ENST00000495630 SSH2Q76I76 1423 aa25.52■■□□□ 1.68
TMEM53-209ENST00000495630 ARHGEF28Q8N1W1 1705 aaKnown RBP25.51■■□□□ 1.67
TMEM53-209ENST00000495630 USP19O94966 1318 aa25.5■■□□□ 1.67
TMEM53-209ENST00000495630 GCP02774 474 aa25.5■■□□□ 1.67
TMEM53-209ENST00000495630 NBPF1Q3BBV0 1214 aa25.48■■□□□ 1.67
TMEM53-209ENST00000495630 NBPF14Q5TI25 921 aa25.48■■□□□ 1.67
TMEM53-209ENST00000495630 TNS1Q9HBL0 1735 aaKnown RBP25.47■■□□□ 1.67
TMEM53-209ENST00000495630 C11orf95C9JLR9 678 aaPredicted RBP25.47■■□□□ 1.67
TMEM53-209ENST00000495630 SRPK2P78362 688 aaKnown RBP25.47■■□□□ 1.67
TMEM53-209ENST00000495630 CAMTA1Q9Y6Y1 1673 aa25.47■■□□□ 1.67
TMEM53-209ENST00000495630 PHRF1Q9P1Y6 1649 aaKnown RBP25.47■■□□□ 1.67
TMEM53-209ENST00000495630 BRD4O60885 1362 aaPredicted RBP25.45■■□□□ 1.67
TMEM53-209ENST00000495630 CENPJQ9HC77 1338 aaPredicted RBP25.42■■□□□ 1.66
TMEM53-209ENST00000495630 CABP2Q9NPB3 220 aa25.42■■□□□ 1.66
TMEM53-209ENST00000495630 PPIP5K1Q6PFW1 1433 aa25.41■■□□□ 1.66
TMEM53-209ENST00000495630 TOPAZ1Q8N9V7 1692 aa25.4■■□□□ 1.66
TMEM53-209ENST00000495630 KIAA1210Q9ULL0 1709 aa25.4■■□□□ 1.66
TMEM53-209ENST00000495630 NRKQ7Z2Y5 1582 aa25.39■■□□□ 1.66
TMEM53-209ENST00000495630 NLRP6P59044 892 aa25.39■■□□□ 1.66
TMEM53-209ENST00000495630 CABP1Q9NZU7 370 aa25.39■■□□□ 1.66
TMEM53-209ENST00000495630 LMO7Q8WWI1 1683 aa25.37■■□□□ 1.65
TMEM53-209ENST00000495630 COL5A2P05997 1499 aaPredicted RBP25.36■■□□□ 1.65
TMEM53-209ENST00000495630 AATKQ6ZMQ8 1374 aa25.36■■□□□ 1.65
TMEM53-209ENST00000495630 CRB1P82279 1406 aa25.36■■□□□ 1.65
TMEM53-209ENST00000495630 PLSCR1O15162 318 aa25.34■■□□□ 1.65
TMEM53-209ENST00000495630 SPON1Q9HCB6 807 aa25.34■■□□□ 1.65
TMEM53-209ENST00000495630 ZBTB7CA1YPR0 619 aa25.33■■□□□ 1.65
TMEM53-209ENST00000495630 USP6P35125 1406 aa25.32■■□□□ 1.64
TMEM53-209ENST00000495630 KCNQ2O43526 872 aa25.32■■□□□ 1.64
TMEM53-209ENST00000495630 DDB1Q16531 1140 aa25.32■■□□□ 1.64
TMEM53-209ENST00000495630 TOM1L2Q6ZVM7 507 aa25.31■■□□□ 1.64
TMEM53-209ENST00000495630 ZNF692Q9BU19 519 aaPredicted RBP25.3■■□□□ 1.64
TMEM53-209ENST00000495630 OVOS2A0A0G2JMS6 1433 aa25.29■■□□□ 1.64
TMEM53-209ENST00000495630 OVOS2A0A0J9YW53 1432 aa25.29■■□□□ 1.64
TMEM53-209ENST00000495630 OVOS2Q6IE36 1432 aa25.29■■□□□ 1.64
TMEM53-209ENST00000495630 CDCA7Q9BWT1 371 aaPredicted RBP25.29■■□□□ 1.64
TMEM53-209ENST00000495630 BCL11BQ9C0K0 894 aaPredicted RBP25.29■■□□□ 1.64
TMEM53-209ENST00000495630 PPP1R1BQ9UD71 204 aaPredicted RBP25.29■■□□□ 1.64
TMEM53-209ENST00000495630 RREB1Q92766 1687 aa25.29■■□□□ 1.64
TMEM53-209ENST00000495630 AXIN2Q9Y2T1 843 aa25.28■■□□□ 1.64
TMEM53-209ENST00000495630 EVC2Q86UK5 1308 aa25.28■■□□□ 1.64
TMEM53-209ENST00000495630 PARP4Q9UKK3 1724 aaKnown RBP25.26■■□□□ 1.63
TMEM53-209ENST00000495630 KCNH5Q8NCM2 988 aa25.26■■□□□ 1.63
TMEM53-209ENST00000495630 WDR17Q8IZU2 1322 aa25.26■■□□□ 1.63
TMEM53-209ENST00000495630 NUP188Q5SRE5 1749 aa25.26■■□□□ 1.63
TMEM53-209ENST00000495630 DCAF8L1A6NGE4 600 aa25.25■■□□□ 1.63
TMEM53-209ENST00000495630 YY1P25490 414 aa25.25■■□□□ 1.63
TMEM53-209ENST00000495630 ARHGEF25Q86VW2 580 aa25.25■■□□□ 1.63
TMEM53-209ENST00000495630 SLIT3O75094 1523 aa25.25■■□□□ 1.63
TMEM53-209ENST00000495630 L3MBTL2Q969R5 705 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms