RNA–Protein interactions for RNA: ENST00000495190.1

VPS8-226, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 756 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-226ENST00000495190 ARID3CA6NKF2 412 aa11.52□□□□□ -0.57
VPS8-226ENST00000495190 ZNF777Q9ULD5 760 aaPredicted RBP11.52□□□□□ -0.57
VPS8-226ENST00000495190 ZNF330Q9Y3S2 320 aaPredicted RBP11.52□□□□□ -0.57
VPS8-226ENST00000495190 IFFO2Q5TF58 517 aa11.51□□□□□ -0.57
VPS8-226ENST00000495190 UNC93B1Q9H1C4 597 aa11.51□□□□□ -0.57
VPS8-226ENST00000495190 POM121CA8CG34 1229 aa11.5□□□□□ -0.57
VPS8-226ENST00000495190 PPP1R18Q6NYC8 613 aa11.5□□□□□ -0.57
VPS8-226ENST00000495190 PLA2G2CQ5R387 149 aa11.49□□□□□ -0.57
VPS8-226ENST00000495190 ZC3H4Q9UPT8 1303 aaKnown RBP11.49□□□□□ -0.57
VPS8-226ENST00000495190 ANKLE1Q8NAG6 615 aa11.48□□□□□ -0.57
VPS8-226ENST00000495190 VAC14Q08AM6 782 aa11.47□□□□□ -0.57
VPS8-226ENST00000495190 WASHC4Q2M389 1173 aa11.47□□□□□ -0.57
VPS8-226ENST00000495190 PNMA1Q8ND90 353 aa11.47□□□□□ -0.57
VPS8-226ENST00000495190 OCSTAMPQ9BR26 566 aa11.47□□□□□ -0.57
VPS8-226ENST00000495190 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.47□□□□□ -0.57
VPS8-226ENST00000495190 FBXO45P0C2W1 286 aa11.46□□□□□ -0.57
VPS8-226ENST00000495190 WWC1Q8IX03 1113 aa11.46□□□□□ -0.57
VPS8-226ENST00000495190 ARMC2Q8NEN0 867 aa11.46□□□□□ -0.57
VPS8-226ENST00000495190 PLSCR2Q9NRY7 297 aa11.46□□□□□ -0.57
VPS8-226ENST00000495190 PDXDC2PQ6P474 469 aa11.45□□□□□ -0.58
VPS8-226ENST00000495190 ADAMTS19Q8TE59 1207 aa11.45□□□□□ -0.58
VPS8-226ENST00000495190 GPKOWQ92917 476 aaPredicted RBP eCLIP11.45□□□□□ -0.58
VPS8-226ENST00000495190 ZBBXA8MT70 800 aa11.44□□□□□ -0.58
VPS8-226ENST00000495190 GGCXP38435 758 aa11.44□□□□□ -0.58
VPS8-226ENST00000495190 NR1H3Q13133 447 aa11.43□□□□□ -0.58
VPS8-226ENST00000495190 BAP1Q92560 729 aa11.43□□□□□ -0.58
VPS8-226ENST00000495190 EMID1Q96A84 441 aaPredicted RBP11.43□□□□□ -0.58
VPS8-226ENST00000495190 NBPF14Q5TI25 921 aa11.42□□□□□ -0.58
VPS8-226ENST00000495190 SH3BP5LQ7L8J4 393 aa11.42□□□□□ -0.58
VPS8-226ENST00000495190 ALG2Q9H553 416 aa11.42□□□□□ -0.58
VPS8-226ENST00000495190 GPSM3Q9Y4H4 160 aa11.42□□□□□ -0.58
VPS8-226ENST00000495190 SH3RF1Q7Z6J0 888 aa11.41□□□□□ -0.58
VPS8-226ENST00000495190 GLMNQ92990 594 aa11.4□□□□□ -0.58
VPS8-226ENST00000495190 PLA2G2EQ9NZK7 142 aa11.4□□□□□ -0.58
VPS8-226ENST00000495190 LINC01559Q495D7 138 aa11.39□□□□□ -0.59
VPS8-226ENST00000495190 HDGFL1Q5TGJ6 251 aa11.39□□□□□ -0.59
VPS8-226ENST00000495190 ZNF511Q8NB15 262 aa11.39□□□□□ -0.59
VPS8-226ENST00000495190 SH3BP2P78314 561 aa11.38□□□□□ -0.59
VPS8-226ENST00000495190 PTK2Q05397 1052 aa11.38□□□□□ -0.59
VPS8-226ENST00000495190 TRIM32Q13049 653 aa11.38□□□□□ -0.59
VPS8-226ENST00000495190 C4orf48Q5BLP8 95 aa11.38□□□□□ -0.59
VPS8-226ENST00000495190 LIAT1Q6ZQX7 453 aa11.38□□□□□ -0.59
VPS8-226ENST00000495190 CCDC82Q8N4S0 544 aa11.38□□□□□ -0.59
VPS8-226ENST00000495190 FOXJ1Q92949 421 aa11.38□□□□□ -0.59
VPS8-226ENST00000495190 RPIAP49247 311 aa11.36□□□□□ -0.59
VPS8-226ENST00000495190 SKOR1P84550 965 aa11.36□□□□□ -0.59
VPS8-226ENST00000495190 CALR3Q96L12 384 aaKnown RBP11.36□□□□□ -0.59
VPS8-226ENST00000495190 ZBTB24O43167 697 aaPredicted RBP11.35□□□□□ -0.59
VPS8-226ENST00000495190 SOX11P35716 441 aa11.35□□□□□ -0.59
VPS8-226ENST00000495190 ADAM32Q8TC27 787 aa11.35□□□□□ -0.59
VPS8-226ENST00000495190 ARHGAP9Q9BRR9 750 aa11.35□□□□□ -0.59
VPS8-226ENST00000495190 A0A0G2JS52 829 aa11.34□□□□□ -0.59
VPS8-226ENST00000495190 EIF4G2P78344 907 aaKnown RBP eCLIP11.34□□□□□ -0.59
VPS8-226ENST00000495190 BPHLQ86WA6 291 aaPredicted RBP11.33□□□□□ -0.6
VPS8-226ENST00000495190 C1QTNF2Q9BXJ5 285 aa11.32□□□□□ -0.6
VPS8-226ENST00000495190 WNT7BP56706 349 aa11.31□□□□□ -0.6
VPS8-226ENST00000495190 SEMA3FQ13275 785 aa11.31□□□□□ -0.6
VPS8-226ENST00000495190 ERFEQ4G0M1 354 aa11.31□□□□□ -0.6
VPS8-226ENST00000495190 UCN2Q96RP3 112 aa11.31□□□□□ -0.6
VPS8-226ENST00000495190 ARID3AQ99856 593 aa11.31□□□□□ -0.6
VPS8-226ENST00000495190 SERPINA10Q9UK55 444 aa11.31□□□□□ -0.6
VPS8-226ENST00000495190 MAGEB6P1A0A0J9YX57 407 aa11.3□□□□□ -0.6
VPS8-226ENST00000495190 ZBTB33Q86T24 672 aa11.3□□□□□ -0.6
VPS8-226ENST00000495190 CARD14Q9BXL6 1004 aa11.3□□□□□ -0.6
VPS8-226ENST00000495190 CD2BP2O95400 341 aaKnown RBP11.29□□□□□ -0.6
VPS8-226ENST00000495190 SLC19A1P41440 591 aa11.28□□□□□ -0.6
VPS8-226ENST00000495190 AGERQ15109 404 aa11.28□□□□□ -0.6
VPS8-226ENST00000495190 PCDHB9Q9Y5E1 797 aa11.28□□□□□ -0.6
VPS8-226ENST00000495190 CCDC97Q96F63 343 aaPredicted RBP11.27□□□□□ -0.61
VPS8-226ENST00000495190 CEP126Q9P2H0 1117 aa11.27□□□□□ -0.61
VPS8-226ENST00000495190 MCCD1P59942 119 aaPredicted RBP11.26□□□□□ -0.61
VPS8-226ENST00000495190 TRMT44Q8IYL2 757 aaKnown RBP11.26□□□□□ -0.61
VPS8-226ENST00000495190 PHTF2Q8N3S3 785 aa11.26□□□□□ -0.61
VPS8-226ENST00000495190 PIK3CDO00329 1044 aa11.25□□□□□ -0.61
VPS8-226ENST00000495190 VARSP26640 1264 aaKnown RBP11.25□□□□□ -0.61
VPS8-226ENST00000495190 RC3H1Q5TC82 1133 aaKnown RBP11.25□□□□□ -0.61
VPS8-226ENST00000495190 SPRYD7Q5W111 196 aa11.25□□□□□ -0.61
VPS8-226ENST00000495190 PPP1R12CQ9BZL4 782 aa11.25□□□□□ -0.61
VPS8-226ENST00000495190 CFAP70Q5T0N1 1121 aa11.24□□□□□ -0.61
VPS8-226ENST00000495190 TBC1D9Q6ZT07 1266 aa11.23□□□□□ -0.61
VPS8-226ENST00000495190 DZIP3Q86Y13 1208 aaKnown RBP11.23□□□□□ -0.61
VPS8-226ENST00000495190 FAM174AQ8TBP5 190 aa11.23□□□□□ -0.61
VPS8-226ENST00000495190 PALM3A6NDB9 673 aaPredicted RBP11.22□□□□□ -0.61
VPS8-226ENST00000495190 SIAH2O43255 324 aa11.22□□□□□ -0.61
VPS8-226ENST00000495190 ZNF592Q92610 1267 aa11.22□□□□□ -0.61
VPS8-226ENST00000495190 TFIP11Q9UBB9 837 aaKnown RBP11.22□□□□□ -0.61
VPS8-226ENST00000495190 CHIC2Q9UKJ5 165 aa11.22□□□□□ -0.61
VPS8-226ENST00000495190 WNT7AO00755 349 aa11.21□□□□□ -0.61
VPS8-226ENST00000495190 PRKD2Q9BZL6 878 aa11.21□□□□□ -0.61
VPS8-226ENST00000495190 SRPK2P78362 688 aaKnown RBP11.2□□□□□ -0.62
VPS8-226ENST00000495190 ZNF598Q86UK7 904 aaKnown RBP11.2□□□□□ -0.62
VPS8-226ENST00000495190 EHBP1Q8NDI1 1231 aa11.2□□□□□ -0.62
VPS8-226ENST00000495190 SLC10A4Q96EP9 437 aa11.2□□□□□ -0.62
VPS8-226ENST00000495190 V9GY48 417 aaPredicted RBP11.2□□□□□ -0.62
VPS8-226ENST00000495190 ESPNB1AK53 854 aa11.19□□□□□ -0.62
VPS8-226ENST00000495190 GIGYF1O75420 1035 aaPredicted RBP11.19□□□□□ -0.62
VPS8-226ENST00000495190 TSGA10IPQ3SY00 556 aa11.19□□□□□ -0.62
VPS8-226ENST00000495190 NFATC2IPQ8NCF5 419 aa11.19□□□□□ -0.62
VPS8-226ENST00000495190 MRGPRX2Q96LB1 330 aa11.19□□□□□ -0.62
VPS8-226ENST00000495190 CDK15Q96Q40 435 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms