RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 PLEKHG3A1L390 1219 aa11.54□□□□□ -0.56
RPGR-210ENST00000494841 BEGAINQ9BUH8 593 aa11.54□□□□□ -0.56
RPGR-210ENST00000494841 HPS5Q9UPZ3 1129 aa11.54□□□□□ -0.56
RPGR-210ENST00000494841 PPRC1Q5VV67 1664 aaKnown RBP11.54□□□□□ -0.56
RPGR-210ENST00000494841 CDC42BPAQ5VT25 1732 aa11.53□□□□□ -0.56
RPGR-210ENST00000494841 DDRGK1Q96HY6 314 aa11.53□□□□□ -0.56
RPGR-210ENST00000494841 TSR3Q9UJK0 312 aaKnown RBP11.53□□□□□ -0.56
RPGR-210ENST00000494841 ZNF777Q9ULD5 760 aaPredicted RBP11.53□□□□□ -0.56
RPGR-210ENST00000494841 CCNB3Q8WWL7 1395 aa11.53□□□□□ -0.56
RPGR-210ENST00000494841 PLCH2O75038 1416 aa11.52□□□□□ -0.56
RPGR-210ENST00000494841 MYO5CQ9NQX4 1742 aa11.52□□□□□ -0.56
RPGR-210ENST00000494841 CDC42BPBQ9Y5S2 1711 aa11.52□□□□□ -0.56
RPGR-210ENST00000494841 GPATCH8Q9UKJ3 1502 aaKnown RBP11.52□□□□□ -0.57
RPGR-210ENST00000494841 CFHP08603 1231 aa11.51□□□□□ -0.57
RPGR-210ENST00000494841 GCGRP47871 477 aa11.51□□□□□ -0.57
RPGR-210ENST00000494841 RSPH4AQ5TD94 716 aa11.51□□□□□ -0.57
RPGR-210ENST00000494841 IL27Q8NEV9 243 aa11.51□□□□□ -0.57
RPGR-210ENST00000494841 CFDP1Q9UEE9 299 aaPredicted RBP11.51□□□□□ -0.57
RPGR-210ENST00000494841 EFCAB2Q5VUJ9 269 aa11.5□□□□□ -0.57
RPGR-210ENST00000494841 NECTIN2Q92692 538 aa11.5□□□□□ -0.57
RPGR-210ENST00000494841 WBP1LQ9NX94 342 aa11.5□□□□□ -0.57
RPGR-210ENST00000494841 ZNF644Q9H582 1327 aaPredicted RBP11.5□□□□□ -0.57
RPGR-210ENST00000494841 PHLDB1Q86UU1 1377 aa11.5□□□□□ -0.57
RPGR-210ENST00000494841 ARHGAP5Q13017 1502 aa11.5□□□□□ -0.57
RPGR-210ENST00000494841 PPP4CP60510 307 aa11.49□□□□□ -0.57
RPGR-210ENST00000494841 RNF166Q96A37 237 aaPredicted RBP11.49□□□□□ -0.57
RPGR-210ENST00000494841 FANCAO15360 1455 aa11.48□□□□□ -0.57
RPGR-210ENST00000494841 PREX2Q70Z35 1606 aa11.48□□□□□ -0.57
RPGR-210ENST00000494841 AKNAQ7Z591 1439 aa11.47□□□□□ -0.57
RPGR-210ENST00000494841 TEX14Q8IWB6 1497 aa11.46□□□□□ -0.57
RPGR-210ENST00000494841 APLP1P51693 650 aa11.46□□□□□ -0.57
RPGR-210ENST00000494841 HNRNPMP52272 730 aaKnown RBP eCLIP11.46□□□□□ -0.57
RPGR-210ENST00000494841 SPIRE2Q8WWL2 714 aa11.46□□□□□ -0.57
RPGR-210ENST00000494841 TBC1D2Q9BYX2 928 aa11.46□□□□□ -0.57
RPGR-210ENST00000494841 ITSN2Q9NZM3 1697 aa11.46□□□□□ -0.58
RPGR-210ENST00000494841 COL17A1Q9UMD9 1497 aaPredicted RBP11.45□□□□□ -0.58
RPGR-210ENST00000494841 MYOM3Q5VTT5 1437 aa11.45□□□□□ -0.58
RPGR-210ENST00000494841 KDM4AO75164 1064 aa11.45□□□□□ -0.58
RPGR-210ENST00000494841 RAPGEF3O95398 923 aa11.45□□□□□ -0.58
RPGR-210ENST00000494841 PTPN5P54829 565 aa11.45□□□□□ -0.58
RPGR-210ENST00000494841 MMRN1Q13201 1228 aa11.45□□□□□ -0.58
RPGR-210ENST00000494841 KMT5BQ4FZB7 885 aa11.45□□□□□ -0.58
RPGR-210ENST00000494841 ARAP3Q8WWN8 1544 aa11.45□□□□□ -0.58
RPGR-210ENST00000494841 ACTN4O43707 911 aaKnown RBP11.44□□□□□ -0.58
RPGR-210ENST00000494841 SAMD9LQ8IVG5 1584 aa11.44□□□□□ -0.58
RPGR-210ENST00000494841 NEO1Q92859 1461 aa11.44□□□□□ -0.58
RPGR-210ENST00000494841 SCAPERQ9BY12 1400 aa11.43□□□□□ -0.58
RPGR-210ENST00000494841 FUT2Q10981 343 aa11.43□□□□□ -0.58
RPGR-210ENST00000494841 NUTM1Q86Y26 1132 aa11.43□□□□□ -0.58
RPGR-210ENST00000494841 AFAP1Q8N556 730 aa11.43□□□□□ -0.58
RPGR-210ENST00000494841 PRR14Q9BWN1 585 aa11.43□□□□□ -0.58
RPGR-210ENST00000494841 ARHGEF12Q9NZN5 1544 aa11.43□□□□□ -0.58
RPGR-210ENST00000494841 FGD6Q6ZV73 1430 aa11.43□□□□□ -0.58
RPGR-210ENST00000494841 CFAP74Q9C0B2 1584 aa11.42□□□□□ -0.58
RPGR-210ENST00000494841 USP46P62068 366 aa11.42□□□□□ -0.58
RPGR-210ENST00000494841 FAM50AQ14320 339 aaKnown RBP11.42□□□□□ -0.58
RPGR-210ENST00000494841 TMEM132AQ24JP5 1023 aa11.42□□□□□ -0.58
RPGR-210ENST00000494841 MYSM1Q5VVJ2 828 aa11.42□□□□□ -0.58
RPGR-210ENST00000494841 ADGRL1O94910 1474 aa11.42□□□□□ -0.58
RPGR-210ENST00000494841 MIA2Q96PC5 1412 aa11.42□□□□□ -0.58
RPGR-210ENST00000494841 HOXA2O43364 376 aa11.41□□□□□ -0.58
RPGR-210ENST00000494841 SH3D19Q5HYK7 790 aa11.41□□□□□ -0.58
RPGR-210ENST00000494841 NYAP1Q6ZVC0 841 aa11.41□□□□□ -0.58
RPGR-210ENST00000494841 PTPN23Q9H3S7 1636 aa11.41□□□□□ -0.58
RPGR-210ENST00000494841 CAMSAP2Q08AD1 1489 aa11.4□□□□□ -0.58
RPGR-210ENST00000494841 KDM6BO15054 1643 aa11.4□□□□□ -0.58
RPGR-210ENST00000494841 DIXDC1Q155Q3 683 aa11.4□□□□□ -0.58
RPGR-210ENST00000494841 RSPH6AQ9H0K4 717 aa11.4□□□□□ -0.58
RPGR-210ENST00000494841 TRAPPC8Q9Y2L5 1435 aa11.4□□□□□ -0.58
RPGR-210ENST00000494841 ABCC1P33527 1531 aa11.4□□□□□ -0.59
RPGR-210ENST00000494841 SYCP2Q9BX26 1530 aa11.4□□□□□ -0.59
RPGR-210ENST00000494841 DENND4BO75064 1496 aaPredicted RBP11.39□□□□□ -0.59
RPGR-210ENST00000494841 MOXD2PA6NHM9 499 aa11.39□□□□□ -0.59
RPGR-210ENST00000494841 ITGAEP38570 1179 aa11.38□□□□□ -0.59
RPGR-210ENST00000494841 HLA-CQ95604 372 aa11.38□□□□□ -0.59
RPGR-210ENST00000494841 HCSTQ9UBK5 93 aa11.38□□□□□ -0.59
RPGR-210ENST00000494841 MBD5Q9P267 1494 aa11.38□□□□□ -0.59
RPGR-210ENST00000494841 KIAA1107Q9UPP5 1409 aa11.37□□□□□ -0.59
RPGR-210ENST00000494841 NDUFV2P19404 249 aa11.37□□□□□ -0.59
RPGR-210ENST00000494841 ATP6V1AP38606 617 aa11.37□□□□□ -0.59
RPGR-210ENST00000494841 GOPCQ9HD26 462 aa11.37□□□□□ -0.59
RPGR-210ENST00000494841 RICTORQ6R327 1708 aa11.37□□□□□ -0.59
RPGR-210ENST00000494841 TCOF1Q13428 1488 aaKnown RBP11.37□□□□□ -0.59
RPGR-210ENST00000494841 PLEKHH2Q8IVE3 1493 aa11.37□□□□□ -0.59
RPGR-210ENST00000494841 SKIV2LQ15477 1246 aaKnown RBP11.36□□□□□ -0.59
RPGR-210ENST00000494841 PUS10Q3MIT2 529 aaKnown RBP11.36□□□□□ -0.59
RPGR-210ENST00000494841 MORN1Q5T089 497 aa11.36□□□□□ -0.59
RPGR-210ENST00000494841 RSBN1LQ6PCB5 846 aaPredicted RBP11.36□□□□□ -0.59
RPGR-210ENST00000494841 PCDHB3Q9Y5E6 796 aa11.36□□□□□ -0.59
RPGR-210ENST00000494841 FRMPD1Q5SYB0 1578 aa11.36□□□□□ -0.59
RPGR-210ENST00000494841 POGZQ7Z3K3 1410 aa11.35□□□□□ -0.59
RPGR-210ENST00000494841 SPTLC1O15269 473 aa11.35□□□□□ -0.59
RPGR-210ENST00000494841 CLK2P49760 499 aaKnown RBP11.35□□□□□ -0.59
RPGR-210ENST00000494841 GUCA2AQ02747 115 aa11.35□□□□□ -0.59
RPGR-210ENST00000494841 POLR3EQ9NVU0 708 aa11.35□□□□□ -0.59
RPGR-210ENST00000494841 LIMD1Q9UGP4 676 aa11.35□□□□□ -0.59
RPGR-210ENST00000494841 CHIC2Q9UKJ5 165 aa11.35□□□□□ -0.59
RPGR-210ENST00000494841 RRBP1Q9P2E9 1410 aaKnown RBP11.35□□□□□ -0.59
RPGR-210ENST00000494841 TSPY4P0CV99 314 aa11.34□□□□□ -0.59
RPGR-210ENST00000494841 TSPY10P0CW01 314 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms