RNA–Protein interactions for RNA: ENST00000494396.5

SYP-208, Transcript of synaptophysin, humanhuman

TSL 2

Gene SYP, Length 2,062 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-208ENST00000494396 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.35■■□□□ 1.01
SYP-208ENST00000494396 A0A1W2PP64 1363 aa21.35■■□□□ 1.01
SYP-208ENST00000494396 DIP2AQ14689 1571 aa21.34■■□□□ 1.01
SYP-208ENST00000494396 NSD2O96028 1365 aa21.34■■□□□ 1.01
SYP-208ENST00000494396 ROBO2Q9HCK4 1378 aa21.34■■□□□ 1.01
SYP-208ENST00000494396 WASLO00401 505 aaPredicted RBP21.33■■□□□ 1.01
SYP-208ENST00000494396 MORC1Q86VD1 984 aa21.33■■□□□ 1.01
SYP-208ENST00000494396 ZNF142P52746 1687 aaPredicted RBP21.33■■□□□ 1
SYP-208ENST00000494396 DUSP27Q5VZP5 1158 aa21.33■■□□□ 1
SYP-208ENST00000494396 ZNF521Q96K83 1311 aa21.33■■□□□ 1
SYP-208ENST00000494396 HDGFL2Q7Z4V5 671 aaPredicted RBP21.32■■□□□ 1
SYP-208ENST00000494396 NGEFQ8N5V2 710 aa21.32■■□□□ 1
SYP-208ENST00000494396 SETD1BQ9UPS6 1966 aaKnown RBP21.31■■□□□ 1
SYP-208ENST00000494396 CABP1Q9NZU7 370 aa21.31■■□□□ 1
SYP-208ENST00000494396 CD163L1Q9NR16 1453 aa21.3■■□□□ 1
SYP-208ENST00000494396 GOLGA2Q08379 1002 aa21.3■■□□□ 1
SYP-208ENST00000494396 PTPRUQ92729 1446 aa21.3■■□□□ 1
SYP-208ENST00000494396 L1TD1Q5T7N2 865 aaKnown RBP21.3■■□□□ 1
SYP-208ENST00000494396 FRAT2O75474 233 aaPredicted RBP21.29■■□□□ 1
SYP-208ENST00000494396 BECN1Q14457 450 aa21.29■■□□□ 1
SYP-208ENST00000494396 C20orf194Q5TEA3 1177 aa21.28■■□□□ 1
SYP-208ENST00000494396 ANKLE2Q86XL3 938 aa21.28■■□□□ 1
SYP-208ENST00000494396 AMOTL2Q9Y2J4 779 aa21.28■■□□□ 1
SYP-208ENST00000494396 POLR3AO14802 1390 aaPredicted RBP21.28■■□□□ 1
SYP-208ENST00000494396 ATP7BP35670 1465 aa21.28■■□□□ 1
SYP-208ENST00000494396 SLC4A3P48751 1232 aa21.27■■□□□ 1
SYP-208ENST00000494396 MAPK8IP3Q9UPT6 1336 aa21.27■■□□□ 1
SYP-208ENST00000494396 PTCH1Q13635 1447 aa21.26■□□□□ 0.99
SYP-208ENST00000494396 ADGRB2O60241 1585 aa21.25■□□□□ 0.99
SYP-208ENST00000494396 AAMPQ13685 434 aa21.25■□□□□ 0.99
SYP-208ENST00000494396 TRMT2AQ8IZ69 625 aaKnown RBP21.25■□□□□ 0.99
SYP-208ENST00000494396 NUDT16Q96DE0 195 aaKnown RBP21.25■□□□□ 0.99
SYP-208ENST00000494396 PIK3R4Q99570 1358 aa21.25■□□□□ 0.99
SYP-208ENST00000494396 PPIP5K1Q6PFW1 1433 aa21.24■□□□□ 0.99
SYP-208ENST00000494396 TNNT2P45379 298 aaPredicted RBP21.24■□□□□ 0.99
SYP-208ENST00000494396 CCDC61Q9Y6R9 512 aa21.24■□□□□ 0.99
SYP-208ENST00000494396 SHPRHQ149N8 1683 aa21.23■□□□□ 0.99
SYP-208ENST00000494396 NKTRP30414 1462 aaKnown RBP21.23■□□□□ 0.99
SYP-208ENST00000494396 SLFN5Q08AF3 891 aa21.22■□□□□ 0.99
SYP-208ENST00000494396 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.22■□□□□ 0.99
SYP-208ENST00000494396 EIF5BO60841 1220 aaKnown RBP21.22■□□□□ 0.99
SYP-208ENST00000494396 SKAP1Q86WV1 359 aa21.22■□□□□ 0.99
SYP-208ENST00000494396 FYB1O15117 783 aa21.2■□□□□ 0.99
SYP-208ENST00000494396 XRN1Q8IZH2 1706 aaKnown RBP21.2■□□□□ 0.99
SYP-208ENST00000494396 CPSF1Q10570 1443 aaKnown RBP21.2■□□□□ 0.98
SYP-208ENST00000494396 PDE3AQ14432 1141 aa21.19■□□□□ 0.98
SYP-208ENST00000494396 CCDC146Q8IYE0 955 aa21.19■□□□□ 0.98
SYP-208ENST00000494396 GGNBP2Q9H3C7 697 aa21.19■□□□□ 0.98
SYP-208ENST00000494396 ANKRD26Q9UPS8 1709 aa21.19■□□□□ 0.98
SYP-208ENST00000494396 CDC42BPGQ6DT37 1551 aa21.18■□□□□ 0.98
SYP-208ENST00000494396 PRR36Q9H6K5 1346 aa21.17■□□□□ 0.98
SYP-208ENST00000494396 MTHFSP49914 203 aa21.17■□□□□ 0.98
SYP-208ENST00000494396 CFAP53Q96M91 514 aa21.17■□□□□ 0.98
SYP-208ENST00000494396 EDC4Q6P2E9 1401 aaKnown RBP21.17■□□□□ 0.98
SYP-208ENST00000494396 APAF1O14727 1248 aa21.16■□□□□ 0.98
SYP-208ENST00000494396 KCNA6P17658 529 aa21.16■□□□□ 0.98
SYP-208ENST00000494396 RGS3P49796 1198 aa21.16■□□□□ 0.98
SYP-208ENST00000494396 USP19O94966 1318 aa21.15■□□□□ 0.98
SYP-208ENST00000494396 NCKAP5LQ9HCH0 1330 aa21.15■□□□□ 0.98
SYP-208ENST00000494396 E9PSI1 815 aa21.15■□□□□ 0.98
SYP-208ENST00000494396 KIF20BQ96Q89 1820 aa21.15■□□□□ 0.98
SYP-208ENST00000494396 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.14■□□□□ 0.98
SYP-208ENST00000494396 ZNF692Q9BU19 519 aaPredicted RBP21.14■□□□□ 0.98
SYP-208ENST00000494396 NPHP4O75161 1426 aaPredicted RBP21.13■□□□□ 0.97
SYP-208ENST00000494396 UPF2Q9HAU5 1272 aaKnown RBP21.13■□□□□ 0.97
SYP-208ENST00000494396 GLIPR1L2Q4G1C9 344 aa21.12■□□□□ 0.97
SYP-208ENST00000494396 TOPAZ1Q8N9V7 1692 aa21.11■□□□□ 0.97
SYP-208ENST00000494396 PLEKHG3A1L390 1219 aa21.11■□□□□ 0.97
SYP-208ENST00000494396 ITSN1Q15811 1721 aa21.11■□□□□ 0.97
SYP-208ENST00000494396 MON2Q7Z3U7 1717 aa21.11■□□□□ 0.97
SYP-208ENST00000494396 AKAP12Q02952 1782 aa21.1■□□□□ 0.97
SYP-208ENST00000494396 CHD2O14647 1828 aaKnown RBP21.09■□□□□ 0.97
SYP-208ENST00000494396 NUTM2FA1L443 756 aa21.09■□□□□ 0.97
SYP-208ENST00000494396 ANTXR1Q9H6X2 564 aa21.08■□□□□ 0.97
SYP-208ENST00000494396 CLUAP1Q96AJ1 413 aa21.07■□□□□ 0.96
SYP-208ENST00000494396 RUNDC1Q96C34 613 aa21.07■□□□□ 0.96
SYP-208ENST00000494396 ACEP12821 1306 aa21.07■□□□□ 0.96
SYP-208ENST00000494396 PMFBP1Q8TBY8 1022 aa21.06■□□□□ 0.96
SYP-208ENST00000494396 IQSEC2Q5JU85 1478 aa21.06■□□□□ 0.96
SYP-208ENST00000494396 NME9Q86XW9 330 aa21.06■□□□□ 0.96
SYP-208ENST00000494396 ISY1Q9ULR0 285 aaKnown RBP21.06■□□□□ 0.96
SYP-208ENST00000494396 ANKARQ7Z5J8 1434 aa21.05■□□□□ 0.96
SYP-208ENST00000494396 COL3A1P02461 1466 aaPredicted RBP21.04■□□□□ 0.96
SYP-208ENST00000494396 COG3Q96JB2 828 aa21.03■□□□□ 0.96
SYP-208ENST00000494396 SPINK5Q9NQ38 1064 aaPredicted RBP21.03■□□□□ 0.96
SYP-208ENST00000494396 TBC1D32Q96NH3 1257 aa21.03■□□□□ 0.96
SYP-208ENST00000494396 USP6P35125 1406 aa21.02■□□□□ 0.96
SYP-208ENST00000494396 FSD2A1L4K1 749 aa21.02■□□□□ 0.96
SYP-208ENST00000494396 GOLGA6L3A6NEY3 463 aa21.01■□□□□ 0.95
SYP-208ENST00000494396 IGHDP01880 384 aa21.01■□□□□ 0.95
SYP-208ENST00000494396 CLCN1P35523 988 aa21.01■□□□□ 0.95
SYP-208ENST00000494396 WWC1Q8IX03 1113 aa21.01■□□□□ 0.95
SYP-208ENST00000494396 TTC21BQ7Z4L5 1316 aa21.01■□□□□ 0.95
SYP-208ENST00000494396 PNPLA6Q8IY17 1366 aa21.01■□□□□ 0.95
SYP-208ENST00000494396 NRKQ7Z2Y5 1582 aa21.01■□□□□ 0.95
SYP-208ENST00000494396 TCP11L2Q8N4U5 519 aa21■□□□□ 0.95
SYP-208ENST00000494396 U2AF1L5P0DN76 240 aaPredicted RBP21■□□□□ 0.95
SYP-208ENST00000494396 U2AF1Q01081 240 aaKnown RBP eCLIP21■□□□□ 0.95
SYP-208ENST00000494396 FMN2Q9NZ56 1722 aa21■□□□□ 0.95
SYP-208ENST00000494396 DMRT2Q9Y5R5 561 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms