RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 SULF1Q8IWU6 871 aa6.75□□□□□ -1.33
PTPN12-212ENST00000494248 WHAMMQ8TF30 809 aa6.74□□□□□ -1.33
PTPN12-212ENST00000494248 GRIPAP1Q4V328 841 aa6.73□□□□□ -1.33
PTPN12-212ENST00000494248 KRTAP5-3Q6L8H2 238 aa6.73□□□□□ -1.33
PTPN12-212ENST00000494248 EHBP1Q8NDI1 1231 aa6.73□□□□□ -1.33
PTPN12-212ENST00000494248 WASF2Q9Y6W5 498 aa6.73□□□□□ -1.33
PTPN12-212ENST00000494248 FURINP09958 794 aa6.72□□□□□ -1.33
PTPN12-212ENST00000494248 CD46P15529 392 aa6.72□□□□□ -1.33
PTPN12-212ENST00000494248 SH3BP2P78314 561 aa6.72□□□□□ -1.33
PTPN12-212ENST00000494248 SYMPKQ92797 1274 aaKnown RBP6.72□□□□□ -1.33
PTPN12-212ENST00000494248 PURBQ96QR8 312 aaKnown RBP6.72□□□□□ -1.33
PTPN12-212ENST00000494248 PPFIA3O75145 1194 aa6.71□□□□□ -1.34
PTPN12-212ENST00000494248 GUCA2AQ02747 115 aa6.71□□□□□ -1.34
PTPN12-212ENST00000494248 MRPL14Q6P1L8 145 aaKnown RBP6.71□□□□□ -1.34
PTPN12-212ENST00000494248 TLL2Q9Y6L7 1015 aa6.71□□□□□ -1.34
PTPN12-212ENST00000494248 COBLO75128 1261 aa6.7□□□□□ -1.34
PTPN12-212ENST00000494248 KDM4AO75164 1064 aa6.7□□□□□ -1.34
PTPN12-212ENST00000494248 TSHZ2Q9NRE2 1034 aa6.7□□□□□ -1.34
PTPN12-212ENST00000494248 JUNDP17535 347 aa6.69□□□□□ -1.34
PTPN12-212ENST00000494248 GPR161Q8N6U8 529 aaKnown RBP6.69□□□□□ -1.34
PTPN12-212ENST00000494248 KLF16Q9BXK1 252 aaPredicted RBP6.69□□□□□ -1.34
PTPN12-212ENST00000494248 TIMP2P16035 220 aa6.68□□□□□ -1.34
PTPN12-212ENST00000494248 NNTQ13423 1086 aa6.67□□□□□ -1.34
PTPN12-212ENST00000494248 NUDT12Q9BQG2 462 aa6.67□□□□□ -1.34
PTPN12-212ENST00000494248 HOXA2O43364 376 aa6.66□□□□□ -1.34
PTPN12-212ENST00000494248 TESPA1A2RU30 521 aaPredicted RBP6.65□□□□□ -1.34
PTPN12-212ENST00000494248 SCARF1Q14162 830 aa6.65□□□□□ -1.34
PTPN12-212ENST00000494248 COL25A1Q9BXS0 654 aaPredicted RBP6.65□□□□□ -1.34
PTPN12-212ENST00000494248 WDR4P57081 412 aaKnown RBP6.64□□□□□ -1.35
PTPN12-212ENST00000494248 LINC01559Q495D7 138 aa6.64□□□□□ -1.35
PTPN12-212ENST00000494248 KRTAP4-11Q9BYQ6 195 aa6.64□□□□□ -1.35
PTPN12-212ENST00000494248 ARID1BQ8NFD5 2236 aaPredicted RBP6.64□□□□□ -1.35
PTPN12-212ENST00000494248 BAP1Q92560 729 aa6.63□□□□□ -1.35
PTPN12-212ENST00000494248 KRTAP4-5Q9BYR2 181 aa6.63□□□□□ -1.35
PTPN12-212ENST00000494248 ITGB7P26010 798 aa6.62□□□□□ -1.35
PTPN12-212ENST00000494248 ZFAND3Q9H8U3 227 aa6.62□□□□□ -1.35
PTPN12-212ENST00000494248 PHF20L1A8MW92 1017 aa6.61□□□□□ -1.35
PTPN12-212ENST00000494248 MAN1A2O60476 641 aa6.61□□□□□ -1.35
PTPN12-212ENST00000494248 ADH1CP00326 375 aa6.61□□□□□ -1.35
PTPN12-212ENST00000494248 USP46P62068 366 aa6.61□□□□□ -1.35
PTPN12-212ENST00000494248 LAMC2Q13753 1193 aa6.61□□□□□ -1.35
PTPN12-212ENST00000494248 RNFT1Q5M7Z0 435 aa6.61□□□□□ -1.35
PTPN12-212ENST00000494248 ZMYM1Q5SVZ6 1142 aa6.61□□□□□ -1.35
PTPN12-212ENST00000494248 MPNDQ8N594 471 aa6.61□□□□□ -1.35
PTPN12-212ENST00000494248 UNC93B1Q9H1C4 597 aa6.61□□□□□ -1.35
PTPN12-212ENST00000494248 C6orf118Q5T5N4 469 aa6.6□□□□□ -1.35
PTPN12-212ENST00000494248 RETREG3Q86VR2 466 aa6.6□□□□□ -1.35
PTPN12-212ENST00000494248 PCDHGC3Q9UN70 934 aa6.6□□□□□ -1.35
PTPN12-212ENST00000494248 CCNYL3P0C7X3 344 aa6.59□□□□□ -1.35
PTPN12-212ENST00000494248 ITPKCQ96DU7 683 aa6.59□□□□□ -1.35
PTPN12-212ENST00000494248 KRTAP9-8Q9BYQ0 159 aa6.59□□□□□ -1.35
PTPN12-212ENST00000494248 DNMT3LQ9UJW3 386 aa6.59□□□□□ -1.35
PTPN12-212ENST00000494248 NR3C2P08235 984 aa6.58□□□□□ -1.36
PTPN12-212ENST00000494248 VARSP26640 1264 aaKnown RBP6.58□□□□□ -1.36
PTPN12-212ENST00000494248 ZNF511Q8NB15 262 aa6.58□□□□□ -1.36
PTPN12-212ENST00000494248 EVA1BQ9NVM1 165 aa6.58□□□□□ -1.36
PTPN12-212ENST00000494248 PLEKHG3A1L390 1219 aa6.57□□□□□ -1.36
PTPN12-212ENST00000494248 ZIC2O95409 532 aaPredicted RBP6.57□□□□□ -1.36
PTPN12-212ENST00000494248 MS4A1P11836 297 aa6.57□□□□□ -1.36
PTPN12-212ENST00000494248 MDM2Q00987 491 aaPredicted RBP6.57□□□□□ -1.36
PTPN12-212ENST00000494248 SOS2Q07890 1332 aaPredicted RBP6.55□□□□□ -1.36
PTPN12-212ENST00000494248 CNTNAP5Q8WYK1 1306 aa6.55□□□□□ -1.36
PTPN12-212ENST00000494248 KCNH2Q12809 1159 aa6.55□□□□□ -1.36
PTPN12-212ENST00000494248 PTPRNQ16849 979 aa6.54□□□□□ -1.36
PTPN12-212ENST00000494248 P3H3Q8IVL6 736 aa6.54□□□□□ -1.36
PTPN12-212ENST00000494248 CDK15Q96Q40 435 aa6.54□□□□□ -1.36
PTPN12-212ENST00000494248 BMP2P12643 396 aa6.53□□□□□ -1.36
PTPN12-212ENST00000494248 GRM5P41594 1212 aa6.53□□□□□ -1.36
PTPN12-212ENST00000494248 LYPD4Q6UWN0 246 aa6.53□□□□□ -1.36
PTPN12-212ENST00000494248 FOXJ1Q92949 421 aa6.53□□□□□ -1.36
PTPN12-212ENST00000494248 C6orf229H3BNL8 230 aa6.52□□□□□ -1.37
PTPN12-212ENST00000494248 FDX1P10109 184 aa6.52□□□□□ -1.37
PTPN12-212ENST00000494248 LINC00528Q8N1L1 170 aa6.52□□□□□ -1.37
PTPN12-212ENST00000494248 MEIOBQ8N635 442 aa6.52□□□□□ -1.37
PTPN12-212ENST00000494248 SCO2A0A1W2PP80 73 aa6.51□□□□□ -1.37
PTPN12-212ENST00000494248 MAP3K10Q02779 954 aa6.51□□□□□ -1.37
PTPN12-212ENST00000494248 PTSQ03393 145 aa6.51□□□□□ -1.37
PTPN12-212ENST00000494248 ARID5BQ14865 1188 aa6.51□□□□□ -1.37
PTPN12-212ENST00000494248 C4orf48Q5BLP8 95 aa6.51□□□□□ -1.37
PTPN12-212ENST00000494248 SMYD5Q6GMV2 418 aa6.51□□□□□ -1.37
PTPN12-212ENST00000494248 YBX3P16989 372 aaKnown RBP eCLIP6.5□□□□□ -1.37
PTPN12-212ENST00000494248 GPIHBP1Q8IV16 184 aa6.5□□□□□ -1.37
PTPN12-212ENST00000494248 FAM174AQ8TBP5 190 aa6.5□□□□□ -1.37
PTPN12-212ENST00000494248 NANOS1Q8WY41 292 aaKnown RBP6.5□□□□□ -1.37
PTPN12-212ENST00000494248 FAM217BQ9NTX9 383 aaPredicted RBP6.5□□□□□ -1.37
PTPN12-212ENST00000494248 IRF6O14896 467 aa6.49□□□□□ -1.37
PTPN12-212ENST00000494248 MAP2K5Q13163 448 aa6.49□□□□□ -1.37
PTPN12-212ENST00000494248 BEND7Q8N7W2 519 aaPredicted RBP6.49□□□□□ -1.37
PTPN12-212ENST00000494248 KRBA1A5PL33 1030 aa6.48□□□□□ -1.37
PTPN12-212ENST00000494248 NDUFV2P19404 249 aa6.48□□□□□ -1.37
PTPN12-212ENST00000494248 PRR7Q8TB68 274 aa6.48□□□□□ -1.37
PTPN12-212ENST00000494248 NR5A1Q13285 461 aa6.47□□□□□ -1.37
PTPN12-212ENST00000494248 NUTM1Q86Y26 1132 aa6.47□□□□□ -1.37
PTPN12-212ENST00000494248 CCDC155Q8N6L0 562 aa6.47□□□□□ -1.37
PTPN12-212ENST00000494248 FIGNL2A6NMB9 653 aa6.46□□□□□ -1.38
PTPN12-212ENST00000494248 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.46□□□□□ -1.38
PTPN12-212ENST00000494248 PODNQ7Z5L7 613 aa6.46□□□□□ -1.38
PTPN12-212ENST00000494248 VWA5B2Q8N398 1253 aa6.46□□□□□ -1.38
PTPN12-212ENST00000494248 ZFP64Q9NPA5 681 aa6.46□□□□□ -1.38
PTPN12-212ENST00000494248 TTLL8A6PVC2 850 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms