RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 NEUROD1Q13562 356 aa19.35■□□□□ 0.69
CTDSP1-212ENST00000494067 NGDNQ8NEJ9 315 aaKnown RBP19.35■□□□□ 0.69
CTDSP1-212ENST00000494067 POLR3AO14802 1390 aaPredicted RBP19.34■□□□□ 0.69
CTDSP1-212ENST00000494067 ATAD2Q6PL18 1390 aa19.34■□□□□ 0.69
CTDSP1-212ENST00000494067 FAM83GA6ND36 823 aa19.34■□□□□ 0.69
CTDSP1-212ENST00000494067 COL14A1Q05707 1796 aaKnown RBP19.34■□□□□ 0.69
CTDSP1-212ENST00000494067 CENPJQ9HC77 1338 aaPredicted RBP19.32■□□□□ 0.68
CTDSP1-212ENST00000494067 ACEP12821 1306 aa19.31■□□□□ 0.68
CTDSP1-212ENST00000494067 NBPF8Q3BBV2 869 aa19.31■□□□□ 0.68
CTDSP1-212ENST00000494067 PAK3O75914 559 aaPredicted RBP19.3■□□□□ 0.68
CTDSP1-212ENST00000494067 NRKQ7Z2Y5 1582 aa19.29■□□□□ 0.68
CTDSP1-212ENST00000494067 CABP2Q9NPB3 220 aa19.29■□□□□ 0.68
CTDSP1-212ENST00000494067 CCDC9Q9Y3X0 531 aaKnown RBP19.29■□□□□ 0.68
CTDSP1-212ENST00000494067 PPIP5K1Q6PFW1 1433 aa19.28■□□□□ 0.68
CTDSP1-212ENST00000494067 PLEKHG3A1L390 1219 aa19.28■□□□□ 0.68
CTDSP1-212ENST00000494067 VPS72Q15906 364 aa19.28■□□□□ 0.68
CTDSP1-212ENST00000494067 CCDC61Q9Y6R9 512 aa19.28■□□□□ 0.68
CTDSP1-212ENST00000494067 NUTM2GQ5VZR2 741 aa19.27■□□□□ 0.68
CTDSP1-212ENST00000494067 ROCK2O75116 1388 aaKnown RBP19.25■□□□□ 0.67
CTDSP1-212ENST00000494067 CCDC125Q86Z20 511 aa19.25■□□□□ 0.67
CTDSP1-212ENST00000494067 BTG4Q9NY30 223 aa19.25■□□□□ 0.67
CTDSP1-212ENST00000494067 SRPK2P78362 688 aaKnown RBP19.24■□□□□ 0.67
CTDSP1-212ENST00000494067 LMO7Q8WWI1 1683 aa19.24■□□□□ 0.67
CTDSP1-212ENST00000494067 KIAA0232Q92628 1395 aa19.23■□□□□ 0.67
CTDSP1-212ENST00000494067 SEPT12Q8IYM1 358 aa19.23■□□□□ 0.67
CTDSP1-212ENST00000494067 AKAP12Q02952 1782 aa19.23■□□□□ 0.67
CTDSP1-212ENST00000494067 PIK3C2AO00443 1686 aa19.23■□□□□ 0.67
CTDSP1-212ENST00000494067 THSD7AQ9UPZ6 1657 aa19.23■□□□□ 0.67
CTDSP1-212ENST00000494067 ONECUT3O60422 494 aaPredicted RBP19.22■□□□□ 0.67
CTDSP1-212ENST00000494067 CHRNA2Q15822 529 aa19.21■□□□□ 0.67
CTDSP1-212ENST00000494067 USP6P35125 1406 aa19.2■□□□□ 0.66
CTDSP1-212ENST00000494067 SSH2Q76I76 1423 aa19.2■□□□□ 0.66
CTDSP1-212ENST00000494067 A0A0G2JS52 829 aa19.2■□□□□ 0.66
CTDSP1-212ENST00000494067 MYT1Q01538 1121 aa19.2■□□□□ 0.66
CTDSP1-212ENST00000494067 USP19O94966 1318 aa19.2■□□□□ 0.66
CTDSP1-212ENST00000494067 ZC3H6P61129 1189 aaKnown RBP19.19■□□□□ 0.66
CTDSP1-212ENST00000494067 CABP1Q9NZU7 370 aa19.19■□□□□ 0.66
CTDSP1-212ENST00000494067 CAMTA1Q9Y6Y1 1673 aa19.19■□□□□ 0.66
CTDSP1-212ENST00000494067 SF3B2Q13435 895 aaKnown RBP19.18■□□□□ 0.66
CTDSP1-212ENST00000494067 FAM98CQ17RN3 349 aaKnown RBP19.18■□□□□ 0.66
CTDSP1-212ENST00000494067 PRDM11Q9NQV5 511 aa19.18■□□□□ 0.66
CTDSP1-212ENST00000494067 SPATA31A5Q5VU36 1347 aa19.17■□□□□ 0.66
CTDSP1-212ENST00000494067 SPATA31A7Q8IWB4 1347 aa19.17■□□□□ 0.66
CTDSP1-212ENST00000494067 SLIT3O75094 1523 aa19.16■□□□□ 0.66
CTDSP1-212ENST00000494067 ABTB2Q8N961 1025 aa19.16■□□□□ 0.66
CTDSP1-212ENST00000494067 MON2Q7Z3U7 1717 aa19.15■□□□□ 0.66
CTDSP1-212ENST00000494067 TRIM26Q12899 539 aaPredicted RBP19.15■□□□□ 0.66
CTDSP1-212ENST00000494067 EVC2Q86UK5 1308 aa19.15■□□□□ 0.66
CTDSP1-212ENST00000494067 KRT27Q7Z3Y8 459 aa19.14■□□□□ 0.65
CTDSP1-212ENST00000494067 COL18A1P39060 1754 aa19.14■□□□□ 0.65
CTDSP1-212ENST00000494067 ZRANB1Q9UGI0 708 aa19.13■□□□□ 0.65
CTDSP1-212ENST00000494067 CPDO75976 1380 aa19.13■□□□□ 0.65
CTDSP1-212ENST00000494067 BLMP54132 1417 aaPredicted RBP19.13■□□□□ 0.65
CTDSP1-212ENST00000494067 CD163L1Q9NR16 1453 aa19.12■□□□□ 0.65
CTDSP1-212ENST00000494067 CPSF1Q10570 1443 aaKnown RBP19.12■□□□□ 0.65
CTDSP1-212ENST00000494067 TONSLQ96HA7 1378 aa19.12■□□□□ 0.65
CTDSP1-212ENST00000494067 SPATA31A1Q5TZJ5 1347 aa19.12■□□□□ 0.65
CTDSP1-212ENST00000494067 FAM182BQ5T319 152 aa19.12■□□□□ 0.65
CTDSP1-212ENST00000494067 TNS1Q9HBL0 1735 aaKnown RBP19.11■□□□□ 0.65
CTDSP1-212ENST00000494067 SBNO2Q9Y2G9 1366 aa19.11■□□□□ 0.65
CTDSP1-212ENST00000494067 GCP02774 474 aa19.11■□□□□ 0.65
CTDSP1-212ENST00000494067 NLRP13Q86W25 1043 aa19.11■□□□□ 0.65
CTDSP1-212ENST00000494067 STRN4Q9NRL3 753 aa19.11■□□□□ 0.65
CTDSP1-212ENST00000494067 BRD4O60885 1362 aaPredicted RBP19.1■□□□□ 0.65
CTDSP1-212ENST00000494067 EVA1CP58658 441 aa19.1■□□□□ 0.65
CTDSP1-212ENST00000494067 DEFB132Q7Z7B7 95 aa19.1■□□□□ 0.65
CTDSP1-212ENST00000494067 CARD11Q9BXL7 1154 aa19.1■□□□□ 0.65
CTDSP1-212ENST00000494067 COL5A2P05997 1499 aaPredicted RBP19.09■□□□□ 0.65
CTDSP1-212ENST00000494067 RGPD5Q99666 1765 aa19.09■□□□□ 0.65
CTDSP1-212ENST00000494067 LARP1Q6PKG0 1096 aaKnown RBP19.08■□□□□ 0.64
CTDSP1-212ENST00000494067 TTC21BQ7Z4L5 1316 aa19.07■□□□□ 0.64
CTDSP1-212ENST00000494067 RGPD1P0DJD0 1748 aa19.07■□□□□ 0.64
CTDSP1-212ENST00000494067 USP54Q70EL1 1684 aa19.07■□□□□ 0.64
CTDSP1-212ENST00000494067 NFAT5O94916 1531 aa19.06■□□□□ 0.64
CTDSP1-212ENST00000494067 NLRP6P59044 892 aa19.06■□□□□ 0.64
CTDSP1-212ENST00000494067 WNK3Q9BYP7 1800 aa19.06■□□□□ 0.64
CTDSP1-212ENST00000494067 USP35Q9P2H5 1018 aa19.05■□□□□ 0.64
CTDSP1-212ENST00000494067 ZNF692Q9BU19 519 aaPredicted RBP19.04■□□□□ 0.64
CTDSP1-212ENST00000494067 PARP4Q9UKK3 1724 aaKnown RBP19.04■□□□□ 0.64
CTDSP1-212ENST00000494067 BAG6P46379 1132 aa19.03■□□□□ 0.64
CTDSP1-212ENST00000494067 KTN1Q86UP2 1357 aaKnown RBP19.03■□□□□ 0.64
CTDSP1-212ENST00000494067 TESK2Q96S53 571 aa19.02■□□□□ 0.64
CTDSP1-212ENST00000494067 AXIN2Q9Y2T1 843 aa19.02■□□□□ 0.64
CTDSP1-212ENST00000494067 LRRC37A3O60309 1634 aa19.02■□□□□ 0.64
CTDSP1-212ENST00000494067 ZBTB7CA1YPR0 619 aa19.01■□□□□ 0.63
CTDSP1-212ENST00000494067 AATKQ6ZMQ8 1374 aa19.01■□□□□ 0.63
CTDSP1-212ENST00000494067 SRCAPQ6ZRS2 3230 aa19■□□□□ 0.63
CTDSP1-212ENST00000494067 BARGINQ6ZT62 677 aa19■□□□□ 0.63
CTDSP1-212ENST00000494067 PEAK1Q9H792 1746 aa19■□□□□ 0.63
CTDSP1-212ENST00000494067 SLC12A5Q9H2X9 1139 aa18.99■□□□□ 0.63
CTDSP1-212ENST00000494067 CRB1P82279 1406 aa18.99■□□□□ 0.63
CTDSP1-212ENST00000494067 TTC21AQ8NDW8 1320 aa18.99■□□□□ 0.63
CTDSP1-212ENST00000494067 LTN1O94822 1766 aa18.98■□□□□ 0.63
CTDSP1-212ENST00000494067 A0A1W2PP64 1363 aa18.98■□□□□ 0.63
CTDSP1-212ENST00000494067 SOX12O15370 315 aa18.98■□□□□ 0.63
CTDSP1-212ENST00000494067 PDE3BQ13370 1112 aa18.98■□□□□ 0.63
CTDSP1-212ENST00000494067 ARHGEF25Q86VW2 580 aa18.98■□□□□ 0.63
CTDSP1-212ENST00000494067 ST20-MTHFSA0A0A6YYL1 179 aa18.97■□□□□ 0.63
CTDSP1-212ENST00000494067 NME9Q86XW9 330 aa18.97■□□□□ 0.63
CTDSP1-212ENST00000494067 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms