RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 CRYBG1Q9Y4K1 1723 aa18.15■□□□□ 0.5
SAMM50-205ENST00000493621 FAM98CQ17RN3 349 aaKnown RBP18.14■□□□□ 0.49
SAMM50-205ENST00000493621 WASLO00401 505 aaPredicted RBP18.13■□□□□ 0.49
SAMM50-205ENST00000493621 ITSN1Q15811 1721 aa18.12■□□□□ 0.49
SAMM50-205ENST00000493621 ARHGEF28Q8N1W1 1705 aaKnown RBP18.12■□□□□ 0.49
SAMM50-205ENST00000493621 NGDNQ8NEJ9 315 aaKnown RBP18.12■□□□□ 0.49
SAMM50-205ENST00000493621 PAK3O75914 559 aaPredicted RBP18.11■□□□□ 0.49
SAMM50-205ENST00000493621 RGPD1P0DJD0 1748 aa18.09■□□□□ 0.49
SAMM50-205ENST00000493621 BAG6P46379 1132 aa18.09■□□□□ 0.49
SAMM50-205ENST00000493621 LRP5O75197 1615 aa18.09■□□□□ 0.49
SAMM50-205ENST00000493621 SPATA31A5Q5VU36 1347 aa18.08■□□□□ 0.49
SAMM50-205ENST00000493621 SPATA31A7Q8IWB4 1347 aa18.08■□□□□ 0.49
SAMM50-205ENST00000493621 THSD7AQ9UPZ6 1657 aa18.07■□□□□ 0.48
SAMM50-205ENST00000493621 FAM182BQ5T319 152 aa18.07■□□□□ 0.48
SAMM50-205ENST00000493621 STAC3Q96MF2 364 aa18.07■□□□□ 0.48
SAMM50-205ENST00000493621 PRDM11Q9NQV5 511 aa18.07■□□□□ 0.48
SAMM50-205ENST00000493621 PHRF1Q9P1Y6 1649 aaKnown RBP18.07■□□□□ 0.48
SAMM50-205ENST00000493621 ATP7BP35670 1465 aa18.07■□□□□ 0.48
SAMM50-205ENST00000493621 PSDA5PKW4 1024 aaPredicted RBP18.06■□□□□ 0.48
SAMM50-205ENST00000493621 NUDT16Q96DE0 195 aaKnown RBP18.05■□□□□ 0.48
SAMM50-205ENST00000493621 TNS1Q9HBL0 1735 aaKnown RBP18.04■□□□□ 0.48
SAMM50-205ENST00000493621 KIAA0232Q92628 1395 aa18.04■□□□□ 0.48
SAMM50-205ENST00000493621 EN1Q05925 392 aaPredicted RBP18.03■□□□□ 0.48
SAMM50-205ENST00000493621 CHRNA2Q15822 529 aa18.03■□□□□ 0.48
SAMM50-205ENST00000493621 TOPAZ1Q8N9V7 1692 aa18.03■□□□□ 0.48
SAMM50-205ENST00000493621 NUTM2GQ5VZR2 741 aa18.02■□□□□ 0.48
SAMM50-205ENST00000493621 CDK19Q9BWU1 502 aa18.02■□□□□ 0.48
SAMM50-205ENST00000493621 SPATA31A1Q5TZJ5 1347 aa18.01■□□□□ 0.47
SAMM50-205ENST00000493621 STRN4Q9NRL3 753 aa18.01■□□□□ 0.47
SAMM50-205ENST00000493621 HRCP23327 699 aa18■□□□□ 0.47
SAMM50-205ENST00000493621 ZC3H6P61129 1189 aaKnown RBP18■□□□□ 0.47
SAMM50-205ENST00000493621 KIAA1210Q9ULL0 1709 aa17.99■□□□□ 0.47
SAMM50-205ENST00000493621 ACEP12821 1306 aa17.98■□□□□ 0.47
SAMM50-205ENST00000493621 POLR3AO14802 1390 aaPredicted RBP17.98■□□□□ 0.47
SAMM50-205ENST00000493621 DISP2A7MBM2 1401 aa17.98■□□□□ 0.47
SAMM50-205ENST00000493621 NBPF8Q3BBV2 869 aa17.97■□□□□ 0.47
SAMM50-205ENST00000493621 USP35Q9P2H5 1018 aa17.97■□□□□ 0.47
SAMM50-205ENST00000493621 NRKQ7Z2Y5 1582 aa17.96■□□□□ 0.47
SAMM50-205ENST00000493621 TRIM37O94972 964 aa17.96■□□□□ 0.47
SAMM50-205ENST00000493621 R3HDM1Q15032 1099 aaKnown RBP17.96■□□□□ 0.47
SAMM50-205ENST00000493621 EZH2Q15910 746 aaKnown RBP17.96■□□□□ 0.47
SAMM50-205ENST00000493621 CCDC61Q9Y6R9 512 aa17.96■□□□□ 0.47
SAMM50-205ENST00000493621 EVA1CP58658 441 aa17.95■□□□□ 0.46
SAMM50-205ENST00000493621 FAM196AQ6ZSG2 479 aa17.95■□□□□ 0.46
SAMM50-205ENST00000493621 PLEKHG3A1L390 1219 aa17.94■□□□□ 0.46
SAMM50-205ENST00000493621 ABTB2Q8N961 1025 aa17.94■□□□□ 0.46
SAMM50-205ENST00000493621 SSH2Q76I76 1423 aa17.94■□□□□ 0.46
SAMM50-205ENST00000493621 CAMTA1Q9Y6Y1 1673 aa17.93■□□□□ 0.46
SAMM50-205ENST00000493621 LMO7Q8WWI1 1683 aa17.93■□□□□ 0.46
SAMM50-205ENST00000493621 NBPF1Q3BBV0 1214 aa17.92■□□□□ 0.46
SAMM50-205ENST00000493621 CAMKK2Q96RR4 588 aa17.92■□□□□ 0.46
SAMM50-205ENST00000493621 APBA3O96018 575 aa17.91■□□□□ 0.46
SAMM50-205ENST00000493621 PDE3BQ13370 1112 aa17.91■□□□□ 0.46
SAMM50-205ENST00000493621 LARP1Q6PKG0 1096 aaKnown RBP17.91■□□□□ 0.46
SAMM50-205ENST00000493621 BARGINQ6ZT62 677 aa17.91■□□□□ 0.46
SAMM50-205ENST00000493621 PPIP5K1Q6PFW1 1433 aa17.9■□□□□ 0.46
SAMM50-205ENST00000493621 RREB1Q92766 1687 aa17.9■□□□□ 0.46
SAMM50-205ENST00000493621 SRPK2P78362 688 aaKnown RBP17.9■□□□□ 0.46
SAMM50-205ENST00000493621 USP19O94966 1318 aa17.9■□□□□ 0.46
SAMM50-205ENST00000493621 CPDO75976 1380 aa17.9■□□□□ 0.46
SAMM50-205ENST00000493621 QRICH2Q9H0J4 1663 aa17.9■□□□□ 0.46
SAMM50-205ENST00000493621 TCP11L2Q8N4U5 519 aa17.89■□□□□ 0.45
SAMM50-205ENST00000493621 NUP188Q5SRE5 1749 aa17.89■□□□□ 0.45
SAMM50-205ENST00000493621 NLRP13Q86W25 1043 aa17.88■□□□□ 0.45
SAMM50-205ENST00000493621 CABP2Q9NPB3 220 aa17.88■□□□□ 0.45
SAMM50-205ENST00000493621 PARD3Q8TEW0 1356 aa17.88■□□□□ 0.45
SAMM50-205ENST00000493621 PARP4Q9UKK3 1724 aaKnown RBP17.87■□□□□ 0.45
SAMM50-205ENST00000493621 GCP02774 474 aa17.87■□□□□ 0.45
SAMM50-205ENST00000493621 CENPJQ9HC77 1338 aaPredicted RBP17.87■□□□□ 0.45
SAMM50-205ENST00000493621 ZBTB7CA1YPR0 619 aa17.85■□□□□ 0.45
SAMM50-205ENST00000493621 COL5A2P05997 1499 aaPredicted RBP17.85■□□□□ 0.45
SAMM50-205ENST00000493621 THRAP3Q9Y2W1 955 aaKnown RBP17.84■□□□□ 0.45
SAMM50-205ENST00000493621 BRD4O60885 1362 aaPredicted RBP17.82■□□□□ 0.44
SAMM50-205ENST00000493621 CABP1Q9NZU7 370 aa17.82■□□□□ 0.44
SAMM50-205ENST00000493621 USP6P35125 1406 aa17.81■□□□□ 0.44
SAMM50-205ENST00000493621 CRB1P82279 1406 aa17.81■□□□□ 0.44
SAMM50-205ENST00000493621 NLRP6P59044 892 aa17.81■□□□□ 0.44
SAMM50-205ENST00000493621 NBPF14Q5TI25 921 aa17.81■□□□□ 0.44
SAMM50-205ENST00000493621 SLIT3O75094 1523 aa17.81■□□□□ 0.44
SAMM50-205ENST00000493621 SBF2Q86WG5 1849 aa17.81■□□□□ 0.44
SAMM50-205ENST00000493621 PIK3C2AO00443 1686 aa17.8■□□□□ 0.44
SAMM50-205ENST00000493621 PEAK1Q9H792 1746 aa17.8■□□□□ 0.44
SAMM50-205ENST00000493621 LRRC37A3O60309 1634 aa17.8■□□□□ 0.44
SAMM50-205ENST00000493621 WNK3Q9BYP7 1800 aa17.79■□□□□ 0.44
SAMM50-205ENST00000493621 COL18A1P39060 1754 aa17.79■□□□□ 0.44
SAMM50-205ENST00000493621 AATKQ6ZMQ8 1374 aa17.79■□□□□ 0.44
SAMM50-205ENST00000493621 OVOS2A0A0G2JMS6 1433 aa17.78■□□□□ 0.44
SAMM50-205ENST00000493621 OVOS2A0A0J9YW53 1432 aa17.78■□□□□ 0.44
SAMM50-205ENST00000493621 OVOS2Q6IE36 1432 aa17.78■□□□□ 0.44
SAMM50-205ENST00000493621 RGPD5Q99666 1765 aa17.78■□□□□ 0.44
SAMM50-205ENST00000493621 C11orf95C9JLR9 678 aaPredicted RBP17.77■□□□□ 0.44
SAMM50-205ENST00000493621 RGPD3A6NKT7 1758 aaPredicted RBP17.76■□□□□ 0.43
SAMM50-205ENST00000493621 RGPD4Q7Z3J3 1758 aa17.76■□□□□ 0.43
SAMM50-205ENST00000493621 TRPM1Q7Z4N2 1603 aa17.76■□□□□ 0.43
SAMM50-205ENST00000493621 TOM1L2Q6ZVM7 507 aa17.76■□□□□ 0.43
SAMM50-205ENST00000493621 AKAP12Q02952 1782 aa17.76■□□□□ 0.43
SAMM50-205ENST00000493621 EVC2Q86UK5 1308 aa17.75■□□□□ 0.43
SAMM50-205ENST00000493621 DDB1Q16531 1140 aa17.75■□□□□ 0.43
SAMM50-205ENST00000493621 L3MBTL2Q969R5 705 aa17.75■□□□□ 0.43
SAMM50-205ENST00000493621 CPSF1Q10570 1443 aaKnown RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms