RNA–Protein interactions for RNA: ENST00000493542.1

TCN2-207, Transcript of transcobalamin 2, humanhuman

TSL 3

Gene TCN2, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN2-207ENST00000493542 TRIM37O94972 964 aa13.73□□□□□ -0.21
TCN2-207ENST00000493542 PMFBP1Q8TBY8 1022 aa13.73□□□□□ -0.21
TCN2-207ENST00000493542 CRYBG1Q9Y4K1 1723 aa13.73□□□□□ -0.21
TCN2-207ENST00000493542 DHX57Q6P158 1386 aaKnown RBP13.72□□□□□ -0.21
TCN2-207ENST00000493542 APBA3O96018 575 aa13.72□□□□□ -0.21
TCN2-207ENST00000493542 TNS1Q9HBL0 1735 aaKnown RBP13.72□□□□□ -0.21
TCN2-207ENST00000493542 PRAM1Q96QH2 718 aa13.71□□□□□ -0.21
TCN2-207ENST00000493542 ANKARQ7Z5J8 1434 aa13.71□□□□□ -0.22
TCN2-207ENST00000493542 FAM196AQ6ZSG2 479 aa13.7□□□□□ -0.22
TCN2-207ENST00000493542 PPP1R1BQ9UD71 204 aaPredicted RBP13.7□□□□□ -0.22
TCN2-207ENST00000493542 DCAF8L1A6NGE4 600 aa13.69□□□□□ -0.22
TCN2-207ENST00000493542 SAFB2Q14151 953 aaKnown RBP eCLIP13.69□□□□□ -0.22
TCN2-207ENST00000493542 NBPF8Q3BBV2 869 aa13.68□□□□□ -0.22
TCN2-207ENST00000493542 NBPF14Q5TI25 921 aa13.68□□□□□ -0.22
TCN2-207ENST00000493542 THSD7AQ9UPZ6 1657 aa13.68□□□□□ -0.22
TCN2-207ENST00000493542 COL14A1Q05707 1796 aaKnown RBP13.68□□□□□ -0.22
TCN2-207ENST00000493542 ACIN1Q9UKV3 1341 aaKnown RBP13.67□□□□□ -0.22
TCN2-207ENST00000493542 SPON1Q9HCB6 807 aa13.67□□□□□ -0.22
TCN2-207ENST00000493542 PARD3Q8TEW0 1356 aa13.67□□□□□ -0.22
TCN2-207ENST00000493542 ARHGEF28Q8N1W1 1705 aaKnown RBP13.67□□□□□ -0.22
TCN2-207ENST00000493542 PRR36Q9H6K5 1346 aa13.66□□□□□ -0.22
TCN2-207ENST00000493542 TULP4Q9NRJ4 1543 aa13.66□□□□□ -0.22
TCN2-207ENST00000493542 PRDM11Q9NQV5 511 aa13.66□□□□□ -0.22
TCN2-207ENST00000493542 SPATA31A1Q5TZJ5 1347 aa13.65□□□□□ -0.22
TCN2-207ENST00000493542 KCNQ2O43526 872 aa13.65□□□□□ -0.22
TCN2-207ENST00000493542 STRN4Q9NRL3 753 aa13.65□□□□□ -0.22
TCN2-207ENST00000493542 GPRASP1Q5JY77 1395 aa13.64□□□□□ -0.23
TCN2-207ENST00000493542 ITSN1Q15811 1721 aa13.64□□□□□ -0.23
TCN2-207ENST00000493542 NINLQ9Y2I6 1382 aa13.63□□□□□ -0.23
TCN2-207ENST00000493542 PAK3O75914 559 aaPredicted RBP13.63□□□□□ -0.23
TCN2-207ENST00000493542 PDE3BQ13370 1112 aa13.63□□□□□ -0.23
TCN2-207ENST00000493542 CHRNA2Q15822 529 aa13.63□□□□□ -0.23
TCN2-207ENST00000493542 HIRIP3Q9BW71 556 aaPredicted RBP13.63□□□□□ -0.23
TCN2-207ENST00000493542 POGKQ9P215 609 aa13.63□□□□□ -0.23
TCN2-207ENST00000493542 USP35Q9P2H5 1018 aa13.63□□□□□ -0.23
TCN2-207ENST00000493542 TRAK1Q9UPV9 953 aa13.63□□□□□ -0.23
TCN2-207ENST00000493542 MINK1Q8N4C8 1332 aaPredicted RBP13.62□□□□□ -0.23
TCN2-207ENST00000493542 PHRF1Q9P1Y6 1649 aaKnown RBP13.61□□□□□ -0.23
TCN2-207ENST00000493542 KIAA0232Q92628 1395 aa13.61□□□□□ -0.23
TCN2-207ENST00000493542 TOPAZ1Q8N9V7 1692 aa13.61□□□□□ -0.23
TCN2-207ENST00000493542 RREB1Q92766 1687 aa13.61□□□□□ -0.23
TCN2-207ENST00000493542 NUP188Q5SRE5 1749 aa13.61□□□□□ -0.23
TCN2-207ENST00000493542 ATP7BP35670 1465 aa13.61□□□□□ -0.23
TCN2-207ENST00000493542 WASLO00401 505 aaPredicted RBP13.6□□□□□ -0.23
TCN2-207ENST00000493542 ZNF784Q8NCA9 323 aaPredicted RBP13.6□□□□□ -0.23
TCN2-207ENST00000493542 CAMTA1Q9Y6Y1 1673 aa13.59□□□□□ -0.23
TCN2-207ENST00000493542 EIF3AQ14152 1382 aaKnown RBP13.59□□□□□ -0.23
TCN2-207ENST00000493542 SENP3-EIF4A1A0A087X0R7 540 aa13.59□□□□□ -0.23
TCN2-207ENST00000493542 ZC3H6P61129 1189 aaKnown RBP13.59□□□□□ -0.23
TCN2-207ENST00000493542 NGDNQ8NEJ9 315 aaKnown RBP13.59□□□□□ -0.23
TCN2-207ENST00000493542 EVA1CP58658 441 aa13.58□□□□□ -0.24
TCN2-207ENST00000493542 DCAF11Q8TEB1 546 aa13.58□□□□□ -0.24
TCN2-207ENST00000493542 KDM2AQ9Y2K7 1162 aa13.58□□□□□ -0.24
TCN2-207ENST00000493542 BARGINQ6ZT62 677 aa13.57□□□□□ -0.24
TCN2-207ENST00000493542 KIAA1210Q9ULL0 1709 aa13.56□□□□□ -0.24
TCN2-207ENST00000493542 NUTM2GQ5VZR2 741 aa13.55□□□□□ -0.24
TCN2-207ENST00000493542 LARP1Q6PKG0 1096 aaKnown RBP13.55□□□□□ -0.24
TCN2-207ENST00000493542 STAC3Q96MF2 364 aa13.55□□□□□ -0.24
TCN2-207ENST00000493542 PDGFDQ9GZP0 370 aaPredicted RBP13.55□□□□□ -0.24
TCN2-207ENST00000493542 SSH2Q76I76 1423 aa13.55□□□□□ -0.24
TCN2-207ENST00000493542 IFFO2Q5TF58 517 aa13.54□□□□□ -0.24
TCN2-207ENST00000493542 TCP11L2Q8N4U5 519 aa13.54□□□□□ -0.24
TCN2-207ENST00000493542 ANO8Q9HCE9 1232 aaPredicted RBP13.54□□□□□ -0.24
TCN2-207ENST00000493542 POLR3AO14802 1390 aaPredicted RBP13.54□□□□□ -0.24
TCN2-207ENST00000493542 NRKQ7Z2Y5 1582 aa13.54□□□□□ -0.24
TCN2-207ENST00000493542 LMO7Q8WWI1 1683 aa13.53□□□□□ -0.24
TCN2-207ENST00000493542 ZBTB7AO95365 584 aa13.53□□□□□ -0.24
TCN2-207ENST00000493542 C1QTNF8P60827 252 aa13.53□□□□□ -0.24
TCN2-207ENST00000493542 NUDT16Q96DE0 195 aaKnown RBP13.53□□□□□ -0.24
TCN2-207ENST00000493542 UTRNP46939 3433 aa13.52□□□□□ -0.25
TCN2-207ENST00000493542 ATF5Q9Y2D1 282 aaPredicted RBP13.51□□□□□ -0.25
TCN2-207ENST00000493542 PLSCR1O15162 318 aa13.5□□□□□ -0.25
TCN2-207ENST00000493542 PTGER2P43116 358 aa13.5□□□□□ -0.25
TCN2-207ENST00000493542 CDK19Q9BWU1 502 aa13.5□□□□□ -0.25
TCN2-207ENST00000493542 BCL11BQ9C0K0 894 aaPredicted RBP13.5□□□□□ -0.25
TCN2-207ENST00000493542 THRAP3Q9Y2W1 955 aaKnown RBP13.5□□□□□ -0.25
TCN2-207ENST00000493542 ACEP12821 1306 aa13.49□□□□□ -0.25
TCN2-207ENST00000493542 PTF1AQ7RTS3 328 aa13.49□□□□□ -0.25
TCN2-207ENST00000493542 CASZ1Q86V15 1759 aa13.48□□□□□ -0.25
TCN2-207ENST00000493542 PLEKHG3A1L390 1219 aa13.48□□□□□ -0.25
TCN2-207ENST00000493542 C11orf95C9JLR9 678 aaPredicted RBP13.48□□□□□ -0.25
TCN2-207ENST00000493542 SYT17Q9BSW7 474 aa13.48□□□□□ -0.25
TCN2-207ENST00000493542 FHDC1Q9C0D6 1143 aaPredicted RBP13.48□□□□□ -0.25
TCN2-207ENST00000493542 MYOM1P52179 1685 aa13.47□□□□□ -0.25
TCN2-207ENST00000493542 CLSPNQ9HAW4 1339 aa13.47□□□□□ -0.25
TCN2-207ENST00000493542 PROM2Q8N271 834 aa13.47□□□□□ -0.25
TCN2-207ENST00000493542 CCDC61Q9Y6R9 512 aa13.47□□□□□ -0.25
TCN2-207ENST00000493542 PARP4Q9UKK3 1724 aaKnown RBP13.47□□□□□ -0.25
TCN2-207ENST00000493542 OVOS2A0A0G2JMS6 1433 aa13.47□□□□□ -0.25
TCN2-207ENST00000493542 OVOS2A0A0J9YW53 1432 aa13.47□□□□□ -0.25
TCN2-207ENST00000493542 OVOS2Q6IE36 1432 aa13.47□□□□□ -0.25
TCN2-207ENST00000493542 QRICH2Q9H0J4 1663 aa13.47□□□□□ -0.25
TCN2-207ENST00000493542 CPDO75976 1380 aa13.46□□□□□ -0.25
TCN2-207ENST00000493542 USP19O94966 1318 aa13.46□□□□□ -0.25
TCN2-207ENST00000493542 NBPF1Q3BBV0 1214 aa13.46□□□□□ -0.25
TCN2-207ENST00000493542 ABTB2Q8N961 1025 aa13.45□□□□□ -0.26
TCN2-207ENST00000493542 SBF2Q86WG5 1849 aa13.44□□□□□ -0.26
TCN2-207ENST00000493542 DDB1Q16531 1140 aa13.44□□□□□ -0.26
TCN2-207ENST00000493542 SIN3AQ96ST3 1273 aa13.44□□□□□ -0.26
TCN2-207ENST00000493542 STK32BQ9NY57 414 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms