RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 MRC2Q9UBG0 1479 aa19.55■□□□□ 0.72
BRAT1-206ENST00000493232 ARGLU1Q9NWB6 273 aaPredicted RBP19.55■□□□□ 0.72
BRAT1-206ENST00000493232 CT47B1P0C2W7 299 aaPredicted RBP19.54■□□□□ 0.72
BRAT1-206ENST00000493232 EPS15P42566 896 aa19.54■□□□□ 0.72
BRAT1-206ENST00000493232 NAP1L1P55209 391 aaKnown RBP19.54■□□□□ 0.72
BRAT1-206ENST00000493232 GNL3LQ9NVN8 582 aaKnown RBP19.54■□□□□ 0.72
BRAT1-206ENST00000493232 SAMD1Q6SPF0 538 aaPredicted RBP19.54■□□□□ 0.72
BRAT1-206ENST00000493232 MNS1Q8NEH6 495 aa19.54■□□□□ 0.72
BRAT1-206ENST00000493232 CNKSR2Q8WXI2 1034 aa19.54■□□□□ 0.72
BRAT1-206ENST00000493232 SLC52A1Q9NWF4 448 aa19.54■□□□□ 0.72
BRAT1-206ENST00000493232 KLHL34Q8N239 644 aa19.54■□□□□ 0.72
BRAT1-206ENST00000493232 DNAJC2Q99543 621 aaKnown RBP19.54■□□□□ 0.72
BRAT1-206ENST00000493232 OFD1O75665 1012 aa19.54■□□□□ 0.72
BRAT1-206ENST00000493232 MBD3O95983 291 aa19.54■□□□□ 0.72
BRAT1-206ENST00000493232 RBM42Q9BTD8 480 aaKnown RBP19.53■□□□□ 0.72
BRAT1-206ENST00000493232 CCT4P50991 539 aaKnown RBP19.53■□□□□ 0.72
BRAT1-206ENST00000493232 RABEP1Q15276 862 aa19.53■□□□□ 0.72
BRAT1-206ENST00000493232 IFT57Q9NWB7 429 aa19.53■□□□□ 0.72
BRAT1-206ENST00000493232 RUFY1Q96T51 708 aa19.53■□□□□ 0.72
BRAT1-206ENST00000493232 HMGXB3Q12766 1538 aa19.53■□□□□ 0.72
BRAT1-206ENST00000493232 ODF2Q5BJF6 829 aa19.53■□□□□ 0.72
BRAT1-206ENST00000493232 CCDC158Q5M9N0 1113 aa19.53■□□□□ 0.72
BRAT1-206ENST00000493232 IKQ13123 557 aaPredicted RBP19.52■□□□□ 0.72
BRAT1-206ENST00000493232 C9orf84Q5VXU9 1444 aa19.52■□□□□ 0.72
BRAT1-206ENST00000493232 KIAA1107Q9UPP5 1409 aa19.52■□□□□ 0.72
BRAT1-206ENST00000493232 EFCAB5A4FU69 1503 aa19.52■□□□□ 0.72
BRAT1-206ENST00000493232 EHBP1L1Q8N3D4 1523 aa19.52■□□□□ 0.71
BRAT1-206ENST00000493232 HDGFL1Q5TGJ6 251 aa19.52■□□□□ 0.71
BRAT1-206ENST00000493232 AK7Q96M32 723 aa19.52■□□□□ 0.71
BRAT1-206ENST00000493232 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.52■□□□□ 0.711e-6■■■■■ 30.3
BRAT1-206ENST00000493232 TXLNAP40222 546 aa19.5■□□□□ 0.71
BRAT1-206ENST00000493232 ZNF396Q96N95 335 aaPredicted RBP19.5■□□□□ 0.71
BRAT1-206ENST00000493232 CCDC39Q9UFE4 941 aa19.5■□□□□ 0.71
BRAT1-206ENST00000493232 CCDC173Q0VFZ6 552 aa19.5■□□□□ 0.71
BRAT1-206ENST00000493232 TTC39AQ5SRH9 613 aa19.5■□□□□ 0.71
BRAT1-206ENST00000493232 KINO60870 393 aaKnown RBP19.5■□□□□ 0.71
BRAT1-206ENST00000493232 CNNM1Q9NRU3 951 aa19.5■□□□□ 0.71
BRAT1-206ENST00000493232 MRE11P49959 708 aa19.5■□□□□ 0.71
BRAT1-206ENST00000493232 CDK19Q9BWU1 502 aa19.49■□□□□ 0.71
BRAT1-206ENST00000493232 SPG7Q9UQ90 795 aa19.49■□□□□ 0.71
BRAT1-206ENST00000493232 NEK4P51957 841 aa19.49■□□□□ 0.71
BRAT1-206ENST00000493232 PDZRN3Q9UPQ7 1066 aa19.49■□□□□ 0.71
BRAT1-206ENST00000493232 RPGRIP1LQ68CZ1 1315 aa19.49■□□□□ 0.71
BRAT1-206ENST00000493232 NESP48681 1621 aa19.49■□□□□ 0.71
BRAT1-206ENST00000493232 FAM43AQ8N2R8 423 aa19.48■□□□□ 0.71
BRAT1-206ENST00000493232 PIP4K2AP48426 406 aaPredicted RBP19.48■□□□□ 0.71
BRAT1-206ENST00000493232 CABP4P57796 275 aa19.48■□□□□ 0.71
BRAT1-206ENST00000493232 ZNF771Q7L3S4 317 aaPredicted RBP19.48■□□□□ 0.71
BRAT1-206ENST00000493232 WDR63Q8IWG1 891 aa19.48■□□□□ 0.71
BRAT1-206ENST00000493232 SLC4A2P04920 1241 aa19.47■□□□□ 0.71
BRAT1-206ENST00000493232 SULT6B1Q6IMI4 303 aa19.47■□□□□ 0.71
BRAT1-206ENST00000493232 IFT140Q96RY7 1462 aa19.47■□□□□ 0.71
BRAT1-206ENST00000493232 FAM177BA6PVY3 158 aa19.47■□□□□ 0.71
BRAT1-206ENST00000493232 CDK5RAP3Q96JB5 506 aa19.47■□□□□ 0.71
BRAT1-206ENST00000493232 SRCIN1Q9C0H9 1055 aa19.47■□□□□ 0.71
BRAT1-206ENST00000493232 STRN4Q9NRL3 753 aa19.47■□□□□ 0.71
BRAT1-206ENST00000493232 MTMR7Q9Y216 660 aa19.47■□□□□ 0.71
BRAT1-206ENST00000493232 RDXP35241 583 aaKnown RBP19.46■□□□□ 0.71
BRAT1-206ENST00000493232 ZNF530Q6P9A1 599 aaPredicted RBP19.46■□□□□ 0.71
BRAT1-206ENST00000493232 JMYQ8N9B5 988 aa19.46■□□□□ 0.71
BRAT1-206ENST00000493232 NACAP1Q9BZK3 213 aa19.46■□□□□ 0.71
BRAT1-206ENST00000493232 NOB1Q9ULX3 412 aaKnown RBP19.46■□□□□ 0.71
BRAT1-206ENST00000493232 ANKRD1Q15327 319 aa19.46■□□□□ 0.71
BRAT1-206ENST00000493232 FILIP1LQ4L180 1135 aa19.46■□□□□ 0.71
BRAT1-206ENST00000493232 CDCA7LQ96GN5 454 aa19.46■□□□□ 0.71
BRAT1-206ENST00000493232 NASPP49321 788 aaPredicted RBP19.46■□□□□ 0.71
BRAT1-206ENST00000493232 PDILTQ8N807 584 aa19.46■□□□□ 0.71
BRAT1-206ENST00000493232 RTEL1-TNFRSF6BF6WH68 1400 aa19.46■□□□□ 0.71
BRAT1-206ENST00000493232 NFKBIBQ15653 356 aa19.45■□□□□ 0.7
BRAT1-206ENST00000493232 HSP90B2PQ58FF3 399 aa19.45■□□□□ 0.7
BRAT1-206ENST00000493232 CABP1Q9NZU7 370 aa19.45■□□□□ 0.7
BRAT1-206ENST00000493232 ATAD2Q6PL18 1390 aa19.45■□□□□ 0.7
BRAT1-206ENST00000493232 TROQ12816 1431 aaPredicted RBP19.45■□□□□ 0.7
BRAT1-206ENST00000493232 SLC12A5Q9H2X9 1139 aa19.45■□□□□ 0.7
BRAT1-206ENST00000493232 NBPF1Q3BBV0 1214 aa19.45■□□□□ 0.7
BRAT1-206ENST00000493232 LRRCC1Q9C099 1032 aa19.45■□□□□ 0.7
BRAT1-206ENST00000493232 ZSCAN25Q6NSZ9 544 aa19.44■□□□□ 0.7
BRAT1-206ENST00000493232 SMARCE1Q969G3 411 aa19.44■□□□□ 0.7
BRAT1-206ENST00000493232 CCP110O43303 1012 aa19.44■□□□□ 0.7
BRAT1-206ENST00000493232 STK38Q15208 465 aa19.43■□□□□ 0.7
BRAT1-206ENST00000493232 MAGEC2Q9UBF1 373 aaPredicted RBP19.43■□□□□ 0.7
BRAT1-206ENST00000493232 CYP46A1Q9Y6A2 500 aa19.43■□□□□ 0.7
BRAT1-206ENST00000493232 ANKRD30BQ9BXX2 1392 aa19.43■□□□□ 0.7
BRAT1-206ENST00000493232 TOM1L2Q6ZVM7 507 aa19.43■□□□□ 0.7
BRAT1-206ENST00000493232 RRP12Q5JTH9 1297 aaKnown RBP19.43■□□□□ 0.7
BRAT1-206ENST00000493232 AEBP1Q8IUX7 1158 aa19.43■□□□□ 0.7
BRAT1-206ENST00000493232 MYO6Q9UM54 1294 aa19.43■□□□□ 0.7
BRAT1-206ENST00000493232 CCAR1Q8IX12 1150 aaKnown RBP19.42■□□□□ 0.7
BRAT1-206ENST00000493232 DHX8Q14562 1220 aaKnown RBP19.42■□□□□ 0.7
BRAT1-206ENST00000493232 TRIM5Q9C035 493 aa19.42■□□□□ 0.7
BRAT1-206ENST00000493232 TRIM22Q8IYM9 498 aa19.42■□□□□ 0.7
BRAT1-206ENST00000493232 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.42■□□□□ 0.71e-6■■■■■ 256.2
BRAT1-206ENST00000493232 POGZQ7Z3K3 1410 aa19.42■□□□□ 0.7
BRAT1-206ENST00000493232 KRI1Q8N9T8 703 aaKnown RBP19.42■□□□□ 0.7
BRAT1-206ENST00000493232 TSR2Q969E8 191 aaKnown RBP19.42■□□□□ 0.7
BRAT1-206ENST00000493232 ARAP1Q96P48 1450 aa19.41■□□□□ 0.7
BRAT1-206ENST00000493232 DCAF8L1A6NGE4 600 aa19.41■□□□□ 0.7
BRAT1-206ENST00000493232 ATP2B1P20020 1258 aa19.41■□□□□ 0.7
BRAT1-206ENST00000493232 CAGE1Q8TC20 777 aa19.41■□□□□ 0.7
BRAT1-206ENST00000493232 ERCC4Q92889 916 aaPredicted RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms