RNA–Protein interactions for RNA: ENST00000492331.1

MCF2L2-213, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 661 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-213ENST00000492331 ATRNO75882 1429 aa13.82□□□□□ -0.2
MCF2L2-213ENST00000492331 PPIP5K1Q6PFW1 1433 aa13.82□□□□□ -0.2
MCF2L2-213ENST00000492331 GJD4Q96KN9 370 aaPredicted RBP13.82□□□□□ -0.2
MCF2L2-213ENST00000492331 PCGF6Q9BYE7 350 aa13.82□□□□□ -0.2
MCF2L2-213ENST00000492331 ALS2Q96Q42 1657 aa13.82□□□□□ -0.2
MCF2L2-213ENST00000492331 FAM83GA6ND36 823 aa13.81□□□□□ -0.2
MCF2L2-213ENST00000492331 UPF1Q92900 1129 aaKnown RBP eCLIP13.81□□□□□ -0.2
MCF2L2-213ENST00000492331 CABP1Q9NZU7 370 aa13.81□□□□□ -0.2
MCF2L2-213ENST00000492331 TOPAZ1Q8N9V7 1692 aa13.81□□□□□ -0.2
MCF2L2-213ENST00000492331 ABCA3Q99758 1704 aa13.81□□□□□ -0.2
MCF2L2-213ENST00000492331 SLIT2O94813 1529 aa13.8□□□□□ -0.2
MCF2L2-213ENST00000492331 ABTB2Q8N961 1025 aa13.8□□□□□ -0.2
MCF2L2-213ENST00000492331 POLR3AO14802 1390 aaPredicted RBP13.8□□□□□ -0.2
MCF2L2-213ENST00000492331 BTG4Q9NY30 223 aa13.79□□□□□ -0.2
MCF2L2-213ENST00000492331 PRDM11Q9NQV5 511 aa13.78□□□□□ -0.2
MCF2L2-213ENST00000492331 PLCH1Q4KWH8 1693 aa13.78□□□□□ -0.2
MCF2L2-213ENST00000492331 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.78□□□□□ -0.2
MCF2L2-213ENST00000492331 ZC3H6P61129 1189 aaKnown RBP13.77□□□□□ -0.21
MCF2L2-213ENST00000492331 VPS72Q15906 364 aa13.77□□□□□ -0.21
MCF2L2-213ENST00000492331 RALGAPBQ86X10 1494 aa13.76□□□□□ -0.21
MCF2L2-213ENST00000492331 A0A0G2JS52 829 aa13.76□□□□□ -0.21
MCF2L2-213ENST00000492331 MYT1Q01538 1121 aa13.76□□□□□ -0.21
MCF2L2-213ENST00000492331 NWD2Q9ULI1 1742 aa13.76□□□□□ -0.21
MCF2L2-213ENST00000492331 ATAD2Q6PL18 1390 aa13.75□□□□□ -0.21
MCF2L2-213ENST00000492331 CHRNA2Q15822 529 aa13.75□□□□□ -0.21
MCF2L2-213ENST00000492331 NLRP13Q86W25 1043 aa13.75□□□□□ -0.21
MCF2L2-213ENST00000492331 COL14A1Q05707 1796 aaKnown RBP13.75□□□□□ -0.21
MCF2L2-213ENST00000492331 KIAA0232Q92628 1395 aa13.74□□□□□ -0.21
MCF2L2-213ENST00000492331 ZBTB7CA1YPR0 619 aa13.74□□□□□ -0.21
MCF2L2-213ENST00000492331 GLI3P10071 1580 aa13.74□□□□□ -0.21
MCF2L2-213ENST00000492331 CRYBG1Q9Y4K1 1723 aa13.73□□□□□ -0.21
MCF2L2-213ENST00000492331 NLRP6P59044 892 aa13.73□□□□□ -0.21
MCF2L2-213ENST00000492331 SEPT12Q8IYM1 358 aa13.73□□□□□ -0.21
MCF2L2-213ENST00000492331 TMC1Q8TDI8 760 aa13.73□□□□□ -0.21
MCF2L2-213ENST00000492331 STRN4Q9NRL3 753 aa13.73□□□□□ -0.21
MCF2L2-213ENST00000492331 PHRF1Q9P1Y6 1649 aaKnown RBP13.72□□□□□ -0.21
MCF2L2-213ENST00000492331 EVA1CP58658 441 aa13.72□□□□□ -0.21
MCF2L2-213ENST00000492331 ZNF692Q9BU19 519 aaPredicted RBP13.72□□□□□ -0.21
MCF2L2-213ENST00000492331 USP6P35125 1406 aa13.72□□□□□ -0.21
MCF2L2-213ENST00000492331 BRD4O60885 1362 aaPredicted RBP13.71□□□□□ -0.21
MCF2L2-213ENST00000492331 FAM98CQ17RN3 349 aaKnown RBP13.71□□□□□ -0.21
MCF2L2-213ENST00000492331 ST20-MTHFSA0A0A6YYL1 179 aa13.7□□□□□ -0.22
MCF2L2-213ENST00000492331 GCP02774 474 aa13.7□□□□□ -0.22
MCF2L2-213ENST00000492331 NRAPQ86VF7 1730 aa13.7□□□□□ -0.22
MCF2L2-213ENST00000492331 KTN1Q86UP2 1357 aaKnown RBP13.7□□□□□ -0.22
MCF2L2-213ENST00000492331 SBNO2Q9Y2G9 1366 aa13.7□□□□□ -0.22
MCF2L2-213ENST00000492331 USP19O94966 1318 aa13.68□□□□□ -0.22
MCF2L2-213ENST00000492331 TTC21BQ7Z4L5 1316 aa13.68□□□□□ -0.22
MCF2L2-213ENST00000492331 SOX12O15370 315 aa13.68□□□□□ -0.22
MCF2L2-213ENST00000492331 KRT27Q7Z3Y8 459 aa13.68□□□□□ -0.22
MCF2L2-213ENST00000492331 CCER1Q8TC90 406 aaPredicted RBP13.68□□□□□ -0.22
MCF2L2-213ENST00000492331 USP35Q9P2H5 1018 aa13.68□□□□□ -0.22
MCF2L2-213ENST00000492331 SPATA31A5Q5VU36 1347 aa13.67□□□□□ -0.22
MCF2L2-213ENST00000492331 SPATA31A7Q8IWB4 1347 aa13.67□□□□□ -0.22
MCF2L2-213ENST00000492331 NRKQ7Z2Y5 1582 aa13.67□□□□□ -0.22
MCF2L2-213ENST00000492331 BRWD3Q6RI45 1802 aa13.67□□□□□ -0.22
MCF2L2-213ENST00000492331 ONECUT3O60422 494 aaPredicted RBP13.67□□□□□ -0.22
MCF2L2-213ENST00000492331 HDGFL2Q7Z4V5 671 aaPredicted RBP13.67□□□□□ -0.22
MCF2L2-213ENST00000492331 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.67□□□□□ -0.22
MCF2L2-213ENST00000492331 SLC12A5Q9H2X9 1139 aa13.67□□□□□ -0.22
MCF2L2-213ENST00000492331 AKAP12Q02952 1782 aa13.67□□□□□ -0.22
MCF2L2-213ENST00000492331 CLSPNQ9HAW4 1339 aa13.66□□□□□ -0.22
MCF2L2-213ENST00000492331 TIMELESSQ9UNS1 1208 aa13.66□□□□□ -0.22
MCF2L2-213ENST00000492331 TTC21AQ8NDW8 1320 aa13.65□□□□□ -0.22
MCF2L2-213ENST00000492331 SSH2Q76I76 1423 aa13.65□□□□□ -0.22
MCF2L2-213ENST00000492331 SLC24A1O60721 1099 aa13.65□□□□□ -0.22
MCF2L2-213ENST00000492331 CCDC125Q86Z20 511 aa13.65□□□□□ -0.22
MCF2L2-213ENST00000492331 TERF2IPQ9NYB0 399 aa13.65□□□□□ -0.22
MCF2L2-213ENST00000492331 CPDO75976 1380 aa13.65□□□□□ -0.22
MCF2L2-213ENST00000492331 PIK3C2AO00443 1686 aa13.65□□□□□ -0.22
MCF2L2-213ENST00000492331 SPATA31A1Q5TZJ5 1347 aa13.64□□□□□ -0.23
MCF2L2-213ENST00000492331 CPSF1Q10570 1443 aaKnown RBP13.64□□□□□ -0.23
MCF2L2-213ENST00000492331 SF3B2Q13435 895 aaKnown RBP13.64□□□□□ -0.23
MCF2L2-213ENST00000492331 LARP1Q6PKG0 1096 aaKnown RBP13.64□□□□□ -0.23
MCF2L2-213ENST00000492331 KCNH5Q8NCM2 988 aa13.64□□□□□ -0.23
MCF2L2-213ENST00000492331 TESK2Q96S53 571 aa13.64□□□□□ -0.23
MCF2L2-213ENST00000492331 CAMTA1Q9Y6Y1 1673 aa13.63□□□□□ -0.23
MCF2L2-213ENST00000492331 USP47Q96K76 1375 aa13.63□□□□□ -0.23
MCF2L2-213ENST00000492331 TMF1P82094 1093 aa13.62□□□□□ -0.23
MCF2L2-213ENST00000492331 FAM182BQ5T319 152 aa13.62□□□□□ -0.23
MCF2L2-213ENST00000492331 PUS7Q96PZ0 661 aaKnown RBP13.62□□□□□ -0.23
MCF2L2-213ENST00000492331 ZRANB1Q9UGI0 708 aa13.62□□□□□ -0.23
MCF2L2-213ENST00000492331 SLIT3O75094 1523 aa13.62□□□□□ -0.23
MCF2L2-213ENST00000492331 MON2Q7Z3U7 1717 aa13.61□□□□□ -0.23
MCF2L2-213ENST00000492331 NME9Q86XW9 330 aa13.61□□□□□ -0.23
MCF2L2-213ENST00000492331 LMO7Q8WWI1 1683 aa13.6□□□□□ -0.23
MCF2L2-213ENST00000492331 BLMP54132 1417 aaPredicted RBP13.6□□□□□ -0.23
MCF2L2-213ENST00000492331 TOM1L2Q6ZVM7 507 aa13.6□□□□□ -0.23
MCF2L2-213ENST00000492331 TCP11L2Q8N4U5 519 aa13.6□□□□□ -0.23
MCF2L2-213ENST00000492331 CD163L1Q9NR16 1453 aa13.6□□□□□ -0.23
MCF2L2-213ENST00000492331 A0A1W2PP64 1363 aa13.59□□□□□ -0.23
MCF2L2-213ENST00000492331 AATKQ6ZMQ8 1374 aa13.59□□□□□ -0.23
MCF2L2-213ENST00000492331 CSB-PGBD3P0DP91 1061 aa13.59□□□□□ -0.23
MCF2L2-213ENST00000492331 PDE3BQ13370 1112 aa13.59□□□□□ -0.23
MCF2L2-213ENST00000492331 ARHGEF25Q86VW2 580 aa13.59□□□□□ -0.23
MCF2L2-213ENST00000492331 COL5A2P05997 1499 aaPredicted RBP13.59□□□□□ -0.23
MCF2L2-213ENST00000492331 EDC4Q6P2E9 1401 aaKnown RBP13.58□□□□□ -0.24
MCF2L2-213ENST00000492331 BARGINQ6ZT62 677 aa13.58□□□□□ -0.24
MCF2L2-213ENST00000492331 DEFB132Q7Z7B7 95 aa13.58□□□□□ -0.24
MCF2L2-213ENST00000492331 AXIN2Q9Y2T1 843 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms