RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 IFT172Q9UG01 1749 aa16.71■□□□□ 0.27
CLCNKA-206ENST00000491433 PRELPP51888 382 aa16.71■□□□□ 0.27
CLCNKA-206ENST00000491433 PHF8Q9UPP1 1060 aa16.71■□□□□ 0.27
CLCNKA-206ENST00000491433 FHDC1Q9C0D6 1143 aaPredicted RBP16.7■□□□□ 0.26
CLCNKA-206ENST00000491433 YTHDC2Q9H6S0 1430 aaKnown RBP16.7■□□□□ 0.26
CLCNKA-206ENST00000491433 ABCA3Q99758 1704 aa16.69■□□□□ 0.26
CLCNKA-206ENST00000491433 RGPD8O14715 1765 aaPredicted RBP16.69■□□□□ 0.26
CLCNKA-206ENST00000491433 NRXN1Q9ULB1 1477 aa16.68■□□□□ 0.26
CLCNKA-206ENST00000491433 PLEKHH1Q9ULM0 1364 aa16.68■□□□□ 0.26
CLCNKA-206ENST00000491433 RGL3Q3MIN7 710 aa16.68■□□□□ 0.26
CLCNKA-206ENST00000491433 LMOD2Q6P5Q4 547 aa16.68■□□□□ 0.26
CLCNKA-206ENST00000491433 PIK3C2GO75747 1445 aa16.68■□□□□ 0.26
CLCNKA-206ENST00000491433 TMEM132EQ6IEE7 984 aa16.67■□□□□ 0.26
CLCNKA-206ENST00000491433 CABLES1Q8TDN4 633 aa16.67■□□□□ 0.26
CLCNKA-206ENST00000491433 DLC1Q96QB1 1528 aa16.65■□□□□ 0.26
CLCNKA-206ENST00000491433 DHX57Q6P158 1386 aaKnown RBP16.65■□□□□ 0.26
CLCNKA-206ENST00000491433 SPATA31E1Q6ZUB1 1445 aa16.65■□□□□ 0.26
CLCNKA-206ENST00000491433 PTGER2P43116 358 aa16.65■□□□□ 0.26
CLCNKA-206ENST00000491433 PPARGC1BQ86YN6 1023 aaKnown RBP16.65■□□□□ 0.26
CLCNKA-206ENST00000491433 MYOM1P52179 1685 aa16.65■□□□□ 0.26
CLCNKA-206ENST00000491433 NRAPQ86VF7 1730 aa16.65■□□□□ 0.26
CLCNKA-206ENST00000491433 GPR162Q16538 588 aa16.64■□□□□ 0.25
CLCNKA-206ENST00000491433 COL14A1Q05707 1796 aaKnown RBP16.64■□□□□ 0.25
CLCNKA-206ENST00000491433 ANKARQ7Z5J8 1434 aa16.63■□□□□ 0.25
CLCNKA-206ENST00000491433 ZBTB7AO95365 584 aa16.63■□□□□ 0.25
CLCNKA-206ENST00000491433 TNS4Q8IZW8 715 aa16.63■□□□□ 0.25
CLCNKA-206ENST00000491433 PLEKHG5O94827 1062 aa16.62■□□□□ 0.25
CLCNKA-206ENST00000491433 COL13A1Q5TAT6 717 aaPredicted RBP16.62■□□□□ 0.25
CLCNKA-206ENST00000491433 BTG4Q9NY30 223 aa16.62■□□□□ 0.25
CLCNKA-206ENST00000491433 C14orf93Q9H972 538 aaKnown RBP16.61■□□□□ 0.25
CLCNKA-206ENST00000491433 EIF3AQ14152 1382 aaKnown RBP16.61■□□□□ 0.25
CLCNKA-206ENST00000491433 GPRASP1Q5JY77 1395 aa16.61■□□□□ 0.25
CLCNKA-206ENST00000491433 SHANK3Q9BYB0 1731 aa16.6■□□□□ 0.25
CLCNKA-206ENST00000491433 SPATA31A5Q5VU36 1347 aa16.6■□□□□ 0.25
CLCNKA-206ENST00000491433 SPATA31A7Q8IWB4 1347 aa16.6■□□□□ 0.25
CLCNKA-206ENST00000491433 ACIN1Q9UKV3 1341 aaKnown RBP16.6■□□□□ 0.25
CLCNKA-206ENST00000491433 THSD7AQ9UPZ6 1657 aa16.59■□□□□ 0.25
CLCNKA-206ENST00000491433 POGKQ9P215 609 aa16.59■□□□□ 0.25
CLCNKA-206ENST00000491433 ATF5Q9Y2D1 282 aaPredicted RBP16.59■□□□□ 0.25
CLCNKA-206ENST00000491433 PMFBP1Q8TBY8 1022 aa16.58■□□□□ 0.24
CLCNKA-206ENST00000491433 PRAM1Q96QH2 718 aa16.58■□□□□ 0.24
CLCNKA-206ENST00000491433 CASZ1Q86V15 1759 aa16.57■□□□□ 0.24
CLCNKA-206ENST00000491433 TRPM3Q9HCF6 1732 aaPredicted RBP16.57■□□□□ 0.24
CLCNKA-206ENST00000491433 ALS2Q96Q42 1657 aa16.57■□□□□ 0.24
CLCNKA-206ENST00000491433 SAFB2Q14151 953 aaKnown RBP eCLIP16.55■□□□□ 0.24
CLCNKA-206ENST00000491433 MPHOSPH9Q99550 1183 aa16.55■□□□□ 0.24
CLCNKA-206ENST00000491433 MAP3K5Q99683 1374 aa16.54■□□□□ 0.24
CLCNKA-206ENST00000491433 CFAP70Q5T0N1 1121 aa16.54■□□□□ 0.24
CLCNKA-206ENST00000491433 PDGFDQ9GZP0 370 aaPredicted RBP16.54■□□□□ 0.24
CLCNKA-206ENST00000491433 GPBP1L1Q9HC44 474 aaPredicted RBP16.54■□□□□ 0.24
CLCNKA-206ENST00000491433 ANO8Q9HCE9 1232 aaPredicted RBP16.54■□□□□ 0.24
CLCNKA-206ENST00000491433 PRDM11Q9NQV5 511 aa16.53■□□□□ 0.24
CLCNKA-206ENST00000491433 APLP1P51693 650 aa16.52■□□□□ 0.24
CLCNKA-206ENST00000491433 PDE3BQ13370 1112 aa16.52■□□□□ 0.24
CLCNKA-206ENST00000491433 PELP1Q8IZL8 1130 aaKnown RBP16.51■□□□□ 0.23
CLCNKA-206ENST00000491433 NGDNQ8NEJ9 315 aaKnown RBP16.51■□□□□ 0.23
CLCNKA-206ENST00000491433 ARXQ96QS3 562 aa16.51■□□□□ 0.23
CLCNKA-206ENST00000491433 MTFR1LQ9H019 292 aa16.51■□□□□ 0.23
CLCNKA-206ENST00000491433 CRYBG1Q9Y4K1 1723 aa16.5■□□□□ 0.23
CLCNKA-206ENST00000491433 TULP4Q9NRJ4 1543 aa16.5■□□□□ 0.23
CLCNKA-206ENST00000491433 SPATA31A1Q5TZJ5 1347 aa16.5■□□□□ 0.23
CLCNKA-206ENST00000491433 ATP10DQ9P241 1426 aa16.5■□□□□ 0.23
CLCNKA-206ENST00000491433 PAK3O75914 559 aaPredicted RBP16.49■□□□□ 0.23
CLCNKA-206ENST00000491433 BCL11BQ9C0K0 894 aaPredicted RBP16.49■□□□□ 0.23
CLCNKA-206ENST00000491433 ITSN1Q15811 1721 aa16.48■□□□□ 0.23
CLCNKA-206ENST00000491433 C11orf95C9JLR9 678 aaPredicted RBP16.48■□□□□ 0.23
CLCNKA-206ENST00000491433 SGIP1Q9BQI5 828 aa16.48■□□□□ 0.23
CLCNKA-206ENST00000491433 DNAJC5GQ8N7S2 189 aa16.47■□□□□ 0.23
CLCNKA-206ENST00000491433 WASLO00401 505 aaPredicted RBP16.46■□□□□ 0.23
CLCNKA-206ENST00000491433 ATP7BP35670 1465 aa16.46■□□□□ 0.23
CLCNKA-206ENST00000491433 PLSCR1O15162 318 aa16.45■□□□□ 0.22
CLCNKA-206ENST00000491433 EVA1CP58658 441 aa16.45■□□□□ 0.22
CLCNKA-206ENST00000491433 BARGINQ6ZT62 677 aa16.45■□□□□ 0.22
CLCNKA-206ENST00000491433 HIRIP3Q9BW71 556 aaPredicted RBP16.45■□□□□ 0.22
CLCNKA-206ENST00000491433 TRAK1Q9UPV9 953 aa16.45■□□□□ 0.22
CLCNKA-206ENST00000491433 GOLGB1Q14789 3259 aaKnown RBP16.45■□□□□ 0.22
CLCNKA-206ENST00000491433 MINK1Q8N4C8 1332 aaPredicted RBP16.45■□□□□ 0.22
CLCNKA-206ENST00000491433 ADGRB1O14514 1584 aa16.44■□□□□ 0.22
CLCNKA-206ENST00000491433 KIAA0232Q92628 1395 aa16.44■□□□□ 0.22
CLCNKA-206ENST00000491433 STAC3Q96MF2 364 aa16.44■□□□□ 0.22
CLCNKA-206ENST00000491433 STRN4Q9NRL3 753 aa16.44■□□□□ 0.22
CLCNKA-206ENST00000491433 STK32BQ9NY57 414 aa16.44■□□□□ 0.22
CLCNKA-206ENST00000491433 PHRF1Q9P1Y6 1649 aaKnown RBP16.44■□□□□ 0.22
CLCNKA-206ENST00000491433 PRR36Q9H6K5 1346 aa16.44■□□□□ 0.22
CLCNKA-206ENST00000491433 GRIN3BO60391 1043 aa16.43■□□□□ 0.22
CLCNKA-206ENST00000491433 AATKQ6ZMQ8 1374 aa16.42■□□□□ 0.22
CLCNKA-206ENST00000491433 RGPD3A6NKT7 1758 aaPredicted RBP16.41■□□□□ 0.22
CLCNKA-206ENST00000491433 RGPD4Q7Z3J3 1758 aa16.41■□□□□ 0.22
CLCNKA-206ENST00000491433 THRAP3Q9Y2W1 955 aaKnown RBP16.41■□□□□ 0.22
CLCNKA-206ENST00000491433 SSH2Q76I76 1423 aa16.4■□□□□ 0.22
CLCNKA-206ENST00000491433 CHRNA2Q15822 529 aa16.4■□□□□ 0.22
CLCNKA-206ENST00000491433 TCP11L2Q8N4U5 519 aa16.4■□□□□ 0.22
CLCNKA-206ENST00000491433 USP35Q9P2H5 1018 aa16.4■□□□□ 0.22
CLCNKA-206ENST00000491433 WWC3Q9ULE0 1092 aa16.4■□□□□ 0.22
CLCNKA-206ENST00000491433 ZC3H6P61129 1189 aaKnown RBP16.39■□□□□ 0.21
CLCNKA-206ENST00000491433 ZNF526Q8TF50 670 aaPredicted RBP16.39■□□□□ 0.21
CLCNKA-206ENST00000491433 SLC15A2Q16348 729 aa16.38■□□□□ 0.21
CLCNKA-206ENST00000491433 KLHL34Q8N239 644 aa16.38■□□□□ 0.21
CLCNKA-206ENST00000491433 NUDT16Q96DE0 195 aaKnown RBP16.38■□□□□ 0.21
CLCNKA-206ENST00000491433 CPDO75976 1380 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms