RNA–Protein interactions for RNA: ENST00000491302.1

PTPRC-212, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 648 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-212ENST00000491302 CTHP32929 405 aa13.94□□□□□ -0.18
PTPRC-212ENST00000491302 ZBTB7CA1YPR0 619 aa13.93□□□□□ -0.18
PTPRC-212ENST00000491302 CCNYL3P0C7X3 344 aa13.93□□□□□ -0.18
PTPRC-212ENST00000491302 COPS2P61201 443 aa13.93□□□□□ -0.18
PTPRC-212ENST00000491302 DXOO77932 396 aaKnown RBP13.92□□□□□ -0.18
PTPRC-212ENST00000491302 MMP16P51512 607 aa13.92□□□□□ -0.18
PTPRC-212ENST00000491302 KCTD12Q96CX2 325 aaKnown RBP13.92□□□□□ -0.18
PTPRC-212ENST00000491302 EVA1BQ9NVM1 165 aa13.92□□□□□ -0.18
PTPRC-212ENST00000491302 PALM3A6NDB9 673 aaPredicted RBP13.91□□□□□ -0.18
PTPRC-212ENST00000491302 CFAP70Q5T0N1 1121 aa13.91□□□□□ -0.18
PTPRC-212ENST00000491302 RETREG2Q8NC44 543 aa13.91□□□□□ -0.18
PTPRC-212ENST00000491302 ZNF592Q92610 1267 aa13.91□□□□□ -0.18
PTPRC-212ENST00000491302 GPKOWQ92917 476 aaPredicted RBP eCLIP13.91□□□□□ -0.18
PTPRC-212ENST00000491302 NUDT12Q9BQG2 462 aa13.91□□□□□ -0.18
PTPRC-212ENST00000491302 MAP10Q9P2G4 905 aa13.91□□□□□ -0.18
PTPRC-212ENST00000491302 RFX1P22670 979 aa13.9□□□□□ -0.18
PTPRC-212ENST00000491302 KCTD17Q8N5Z5 321 aa13.9□□□□□ -0.18
PTPRC-212ENST00000491302 FAM160A2Q8N612 972 aaPredicted RBP13.9□□□□□ -0.18
PTPRC-212ENST00000491302 FBXO45P0C2W1 286 aa13.89□□□□□ -0.19
PTPRC-212ENST00000491302 KCNH2Q12809 1159 aa13.89□□□□□ -0.19
PTPRC-212ENST00000491302 GPSM3Q9Y4H4 160 aa13.89□□□□□ -0.19
PTPRC-212ENST00000491302 ZPR1O75312 459 aa13.88□□□□□ -0.19
PTPRC-212ENST00000491302 TFIP11Q9UBB9 837 aaKnown RBP13.88□□□□□ -0.19
PTPRC-212ENST00000491302 ADH1BP00325 375 aa13.87□□□□□ -0.19
PTPRC-212ENST00000491302 LMOD1P29536 600 aaPredicted RBP13.87□□□□□ -0.19
PTPRC-212ENST00000491302 PTK2Q05397 1052 aa13.86□□□□□ -0.19
PTPRC-212ENST00000491302 NBPF14Q5TI25 921 aa13.86□□□□□ -0.19
PTPRC-212ENST00000491302 PDXDC2PQ6P474 469 aa13.86□□□□□ -0.19
PTPRC-212ENST00000491302 UCN2Q96RP3 112 aa13.86□□□□□ -0.19
PTPRC-212ENST00000491302 MCCD1P59942 119 aaPredicted RBP13.85□□□□□ -0.19
PTPRC-212ENST00000491302 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.84□□□□□ -0.19
PTPRC-212ENST00000491302 SRPK2P78362 688 aaKnown RBP13.83□□□□□ -0.2
PTPRC-212ENST00000491302 MTRQ99707 1265 aa13.83□□□□□ -0.2
PTPRC-212ENST00000491302 IL21Q9HBE4 155 aa13.83□□□□□ -0.2
PTPRC-212ENST00000491302 ATP9BO43861 1147 aa13.82□□□□□ -0.2
PTPRC-212ENST00000491302 CSB-PGBD3P0DP91 1061 aa13.82□□□□□ -0.2
PTPRC-212ENST00000491302 PRDM9Q9NQV7 894 aa13.82□□□□□ -0.2
PTPRC-212ENST00000491302 PCDH10Q9P2E7 1040 aa13.82□□□□□ -0.2
PTPRC-212ENST00000491302 NFATC2IPQ8NCF5 419 aa13.81□□□□□ -0.2
PTPRC-212ENST00000491302 USTQ9Y2C2 406 aa13.81□□□□□ -0.2
PTPRC-212ENST00000491302 MAFBQ9Y5Q3 323 aaPredicted RBP13.81□□□□□ -0.2
PTPRC-212ENST00000491302 MYT1LQ9UL68 1186 aa13.8□□□□□ -0.2
PTPRC-212ENST00000491302 TLL1O43897 1013 aa13.79□□□□□ -0.2
PTPRC-212ENST00000491302 PTPN5P54829 565 aa13.79□□□□□ -0.2
PTPRC-212ENST00000491302 TBC1D9Q6ZT07 1266 aa13.79□□□□□ -0.2
PTPRC-212ENST00000491302 SLC6A16Q9GZN6 736 aa13.79□□□□□ -0.2
PTPRC-212ENST00000491302 TJAP1Q5JTD0 557 aa13.77□□□□□ -0.21
PTPRC-212ENST00000491302 SPNS2Q8IVW8 549 aa13.77□□□□□ -0.21
PTPRC-212ENST00000491302 CCDC24Q8N4L8 307 aa13.77□□□□□ -0.21
PTPRC-212ENST00000491302 UNC93B1Q9H1C4 597 aa13.76□□□□□ -0.21
PTPRC-212ENST00000491302 ATG7O95352 703 aa13.75□□□□□ -0.21
PTPRC-212ENST00000491302 AEBP1Q8IUX7 1158 aa13.75□□□□□ -0.21
PTPRC-212ENST00000491302 ARHGAP9Q9BRR9 750 aa13.75□□□□□ -0.21
PTPRC-212ENST00000491302 VRTNQ9H8Y1 702 aa13.75□□□□□ -0.21
PTPRC-212ENST00000491302 PATL2C9JE40 543 aaKnown RBP13.73□□□□□ -0.21
PTPRC-212ENST00000491302 SKIP12755 728 aa13.73□□□□□ -0.21
PTPRC-212ENST00000491302 SLFNL1Q499Z3 407 aa13.73□□□□□ -0.21
PTPRC-212ENST00000491302 ZBTB33Q86T24 672 aa13.73□□□□□ -0.21
PTPRC-212ENST00000491302 PCDHB9Q9Y5E1 797 aa13.73□□□□□ -0.21
PTPRC-212ENST00000491302 ZNF516Q92618 1163 aa13.72□□□□□ -0.21
PTPRC-212ENST00000491302 CEP126Q9P2H0 1117 aa13.72□□□□□ -0.21
PTPRC-212ENST00000491302 PLEKHM2Q8IWE5 1019 aa13.71□□□□□ -0.21
PTPRC-212ENST00000491302 ADAM32Q8TC27 787 aa13.71□□□□□ -0.21
PTPRC-212ENST00000491302 PIK3CDO00329 1044 aa13.69□□□□□ -0.22
PTPRC-212ENST00000491302 LZTS3O60299 673 aaPredicted RBP13.69□□□□□ -0.22
PTPRC-212ENST00000491302 CDCA8Q53HL2 280 aa13.69□□□□□ -0.22
PTPRC-212ENST00000491302 PTCRAQ6ISU1 281 aaPredicted RBP13.69□□□□□ -0.22
PTPRC-212ENST00000491302 SH3BP5LQ7L8J4 393 aa13.69□□□□□ -0.22
PTPRC-212ENST00000491302 OCSTAMPQ9BR26 566 aa13.69□□□□□ -0.22
PTPRC-212ENST00000491302 USP17L3A6NCW0 530 aa13.68□□□□□ -0.22
PTPRC-212ENST00000491302 USP17L4A6NCW7 530 aa13.68□□□□□ -0.22
PTPRC-212ENST00000491302 USP17L5A8MUK1 530 aa13.68□□□□□ -0.22
PTPRC-212ENST00000491302 USP17L2Q6R6M4 530 aa13.68□□□□□ -0.22
PTPRC-212ENST00000491302 USP17L1Q7RTZ2 530 aa13.68□□□□□ -0.22
PTPRC-212ENST00000491302 RNF135Q8IUD6 432 aa13.68□□□□□ -0.22
PTPRC-212ENST00000491302 BRD1O95696 1058 aa13.67□□□□□ -0.22
PTPRC-212ENST00000491302 KANK4Q5T7N3 995 aaPredicted RBP13.67□□□□□ -0.22
PTPRC-212ENST00000491302 BPHLQ86WA6 291 aaPredicted RBP13.67□□□□□ -0.22
PTPRC-212ENST00000491302 DZIP3Q86Y13 1208 aaKnown RBP13.67□□□□□ -0.22
PTPRC-212ENST00000491302 CCDC9Q9Y3X0 531 aaKnown RBP13.66□□□□□ -0.22
PTPRC-212ENST00000491302 S1PR4O95977 384 aa13.65□□□□□ -0.22
PTPRC-212ENST00000491302 ELOAQ14241 798 aaKnown RBP13.65□□□□□ -0.22
PTPRC-212ENST00000491302 MAP7D1Q3KQU3 841 aa13.65□□□□□ -0.22
PTPRC-212ENST00000491302 AGERQ15109 404 aa13.64□□□□□ -0.23
PTPRC-212ENST00000491302 SH3RF1Q7Z6J0 888 aa13.64□□□□□ -0.23
PTPRC-212ENST00000491302 PHTF2Q8N3S3 785 aa13.64□□□□□ -0.23
PTPRC-212ENST00000491302 FAM174AQ8TBP5 190 aa13.64□□□□□ -0.23
PTPRC-212ENST00000491302 FCF1Q9Y324 198 aaKnown RBP13.64□□□□□ -0.23
PTPRC-212ENST00000491302 BAP1Q92560 729 aa13.63□□□□□ -0.23
PTPRC-212ENST00000491302 MAGEB6P1A0A0J9YX57 407 aa13.62□□□□□ -0.23
PTPRC-212ENST00000491302 ATP5J2-PTCD1G3V325 749 aa13.62□□□□□ -0.23
PTPRC-212ENST00000491302 KCNA1Q09470 495 aa13.62□□□□□ -0.23
PTPRC-212ENST00000491302 PLPP7Q8NBV4 271 aa13.62□□□□□ -0.23
PTPRC-212ENST00000491302 NKX2-3Q8TAU0 364 aa13.62□□□□□ -0.23
PTPRC-212ENST00000491302 ZNF511Q8NB15 262 aa13.61□□□□□ -0.23
PTPRC-212ENST00000491302 CARD14Q9BXL6 1004 aa13.61□□□□□ -0.23
PTPRC-212ENST00000491302 MKRN1Q9UHC7 482 aaKnown RBP13.61□□□□□ -0.23
PTPRC-212ENST00000491302 FAM196BA6NMK8 535 aa13.6□□□□□ -0.23
PTPRC-212ENST00000491302 LARP1Q6PKG0 1096 aaKnown RBP13.6□□□□□ -0.23
PTPRC-212ENST00000491302 DEPDC4Q8N2C3 294 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms