RNA–Protein interactions for RNA: ENST00000491299.5

CMSS1-206, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-206ENST00000491299 CCDC144AA2RUR9 1427 aa12.67□□□□□ -0.38
CMSS1-206ENST00000491299 PIK3R4Q99570 1358 aa12.67□□□□□ -0.38
CMSS1-206ENST00000491299 NEXMIFQ5QGS0 1516 aa12.67□□□□□ -0.38
CMSS1-206ENST00000491299 SETBP1Q9Y6X0 1596 aa12.66□□□□□ -0.38
CMSS1-206ENST00000491299 ADAMTS13Q76LX8 1427 aa12.66□□□□□ -0.38
CMSS1-206ENST00000491299 GTPBP6O43824 516 aaPredicted RBP12.66□□□□□ -0.38
CMSS1-206ENST00000491299 TRIM26Q12899 539 aaPredicted RBP12.66□□□□□ -0.38
CMSS1-206ENST00000491299 MSH6P52701 1360 aa12.66□□□□□ -0.38
CMSS1-206ENST00000491299 C14orf37Q86TY3 774 aa12.65□□□□□ -0.38
CMSS1-206ENST00000491299 RAB3GAP2Q9H2M9 1393 aa12.65□□□□□ -0.38
CMSS1-206ENST00000491299 C2orf72A6NCS6 295 aa12.64□□□□□ -0.39
CMSS1-206ENST00000491299 HOXB3P14651 431 aaPredicted RBP12.64□□□□□ -0.39
CMSS1-206ENST00000491299 PPLO60437 1756 aa12.64□□□□□ -0.39
CMSS1-206ENST00000491299 RPGRIP1LQ68CZ1 1315 aa12.63□□□□□ -0.39
CMSS1-206ENST00000491299 NRXN3Q9Y4C0 1643 aa12.63□□□□□ -0.39
CMSS1-206ENST00000491299 TMC2Q8TDI7 906 aa12.63□□□□□ -0.39
CMSS1-206ENST00000491299 ALKQ9UM73 1620 aa12.62□□□□□ -0.39
CMSS1-206ENST00000491299 DOK7Q18PE1 504 aa12.62□□□□□ -0.39
CMSS1-206ENST00000491299 RBM33Q96EV2 1170 aaKnown RBP12.62□□□□□ -0.39
CMSS1-206ENST00000491299 NCOA3Q9Y6Q9 1424 aa12.62□□□□□ -0.39
CMSS1-206ENST00000491299 HSPA1LP34931 641 aa12.61□□□□□ -0.39
CMSS1-206ENST00000491299 ILDR2Q71H61 639 aa12.61□□□□□ -0.39
CMSS1-206ENST00000491299 ZNF710Q8N1W2 664 aa12.61□□□□□ -0.39
CMSS1-206ENST00000491299 BBXQ8WY36 941 aaPredicted RBP12.61□□□□□ -0.39
CMSS1-206ENST00000491299 DISP3Q9P2K9 1392 aa12.6□□□□□ -0.39
CMSS1-206ENST00000491299 KIF3CO14782 793 aa12.6□□□□□ -0.39
CMSS1-206ENST00000491299 PCGF6Q9BYE7 350 aa12.6□□□□□ -0.39
CMSS1-206ENST00000491299 AMOTL2Q9Y2J4 779 aa12.6□□□□□ -0.39
CMSS1-206ENST00000491299 XRN1Q8IZH2 1706 aaKnown RBP12.59□□□□□ -0.39
CMSS1-206ENST00000491299 MARVELD3Q96A59 401 aa12.59□□□□□ -0.39
CMSS1-206ENST00000491299 ROBO1Q9Y6N7 1651 aa12.58□□□□□ -0.4
CMSS1-206ENST00000491299 RGL3Q3MIN7 710 aa12.58□□□□□ -0.4
CMSS1-206ENST00000491299 ANKRD30BQ9BXX2 1392 aa12.57□□□□□ -0.4
CMSS1-206ENST00000491299 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.57□□□□□ -0.4
CMSS1-206ENST00000491299 IFT172Q9UG01 1749 aa12.57□□□□□ -0.4
CMSS1-206ENST00000491299 FAM135BQ49AJ0 1406 aa12.57□□□□□ -0.4
CMSS1-206ENST00000491299 PTPRUQ92729 1446 aa12.57□□□□□ -0.4
CMSS1-206ENST00000491299 RIMBP2O15034 1052 aa12.57□□□□□ -0.4
CMSS1-206ENST00000491299 ATF3P18847 181 aa12.57□□□□□ -0.4
CMSS1-206ENST00000491299 CADPS2Q86UW7 1296 aa12.57□□□□□ -0.4
CMSS1-206ENST00000491299 METP08581 1390 aa12.56□□□□□ -0.4
CMSS1-206ENST00000491299 HRCP23327 699 aa12.56□□□□□ -0.4
CMSS1-206ENST00000491299 C19orf44Q9H6X5 657 aa12.56□□□□□ -0.4
CMSS1-206ENST00000491299 SETD1AO15047 1707 aaKnown RBP12.56□□□□□ -0.4
CMSS1-206ENST00000491299 SPATA31E1Q6ZUB1 1445 aa12.55□□□□□ -0.4
CMSS1-206ENST00000491299 EMP3P54852 163 aa12.55□□□□□ -0.4
CMSS1-206ENST00000491299 SLAIN2Q9P270 581 aa12.55□□□□□ -0.4
CMSS1-206ENST00000491299 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.54□□□□□ -0.4
CMSS1-206ENST00000491299 DCCP43146 1447 aa12.54□□□□□ -0.4
CMSS1-206ENST00000491299 PHLPP1O60346 1717 aa12.53□□□□□ -0.4
CMSS1-206ENST00000491299 PTCH1Q13635 1447 aa12.53□□□□□ -0.4
CMSS1-206ENST00000491299 MED1Q15648 1581 aaPredicted RBP12.52□□□□□ -0.4
CMSS1-206ENST00000491299 NALCNQ8IZF0 1738 aa12.51□□□□□ -0.41
CMSS1-206ENST00000491299 ADGRF5Q8IZF2 1346 aa12.51□□□□□ -0.41
CMSS1-206ENST00000491299 ADGRL3Q9HAR2 1447 aa12.51□□□□□ -0.41
CMSS1-206ENST00000491299 LAMC1P11047 1609 aa12.51□□□□□ -0.41
CMSS1-206ENST00000491299 GPHNQ9NQX3 736 aaPredicted RBP12.5□□□□□ -0.41
CMSS1-206ENST00000491299 PIK3C2GO75747 1445 aa12.5□□□□□ -0.41
CMSS1-206ENST00000491299 MYOM2P54296 1465 aa12.49□□□□□ -0.41
CMSS1-206ENST00000491299 PRAG1Q86YV5 1406 aa12.48□□□□□ -0.41
CMSS1-206ENST00000491299 HOXB1P14653 301 aaPredicted RBP12.48□□□□□ -0.41
CMSS1-206ENST00000491299 SPRYD3Q8NCJ5 442 aa12.48□□□□□ -0.41
CMSS1-206ENST00000491299 ZSWIM6Q9HCJ5 1215 aa12.48□□□□□ -0.41
CMSS1-206ENST00000491299 KNDC1Q76NI1 1749 aa12.48□□□□□ -0.41
CMSS1-206ENST00000491299 DSG2Q14126 1118 aa12.47□□□□□ -0.41
CMSS1-206ENST00000491299 CFAP44Q96MT7 982 aa12.47□□□□□ -0.41
CMSS1-206ENST00000491299 ROBO2Q9HCK4 1378 aa12.46□□□□□ -0.41
CMSS1-206ENST00000491299 FOXK1P85037 733 aa12.46□□□□□ -0.41
CMSS1-206ENST00000491299 PAXIP1Q6ZW49 1069 aaPredicted RBP12.46□□□□□ -0.41
CMSS1-206ENST00000491299 PLPP6Q8IY26 295 aa12.46□□□□□ -0.41
CMSS1-206ENST00000491299 CRISPLD2Q9H0B8 497 aa12.46□□□□□ -0.41
CMSS1-206ENST00000491299 STK26Q9P289 416 aa12.46□□□□□ -0.41
CMSS1-206ENST00000491299 MST1RQ04912 1400 aa12.45□□□□□ -0.42
CMSS1-206ENST00000491299 AHDC1Q5TGY3 1603 aaPredicted RBP12.45□□□□□ -0.42
CMSS1-206ENST00000491299 FAM205CA6NFA0 338 aa12.45□□□□□ -0.42
CMSS1-206ENST00000491299 ARSIQ5FYB1 569 aa12.45□□□□□ -0.42
CMSS1-206ENST00000491299 ASXL1Q8IXJ9 1541 aa12.45□□□□□ -0.42
CMSS1-206ENST00000491299 NRXN1Q9ULB1 1477 aa12.45□□□□□ -0.42
CMSS1-206ENST00000491299 LRPPRCP42704 1394 aaKnown RBP12.44□□□□□ -0.42
CMSS1-206ENST00000491299 COL16A1Q07092 1604 aaPredicted RBP12.44□□□□□ -0.42
CMSS1-206ENST00000491299 DHX57Q6P158 1386 aaKnown RBP12.44□□□□□ -0.42
CMSS1-206ENST00000491299 JCADQ9P266 1359 aa12.44□□□□□ -0.42
CMSS1-206ENST00000491299 GPR153Q6NV75 609 aa12.44□□□□□ -0.42
CMSS1-206ENST00000491299 BRINP3Q76B58 766 aa12.44□□□□□ -0.42
CMSS1-206ENST00000491299 DCAF11Q8TEB1 546 aa12.44□□□□□ -0.42
CMSS1-206ENST00000491299 KHSRPQ92945 711 aaKnown RBP eCLIP12.44□□□□□ -0.422e-6■■■■□ 21
CMSS1-206ENST00000491299 STAC3Q96MF2 364 aa12.44□□□□□ -0.42
CMSS1-206ENST00000491299 TECPR2O15040 1411 aa12.44□□□□□ -0.42
CMSS1-206ENST00000491299 YTHDC2Q9H6S0 1430 aaKnown RBP12.44□□□□□ -0.42
CMSS1-206ENST00000491299 TMEM132EQ6IEE7 984 aa12.43□□□□□ -0.42
CMSS1-206ENST00000491299 C14orf93Q9H972 538 aaKnown RBP12.43□□□□□ -0.42
CMSS1-206ENST00000491299 KDM2AQ9Y2K7 1162 aa12.43□□□□□ -0.42
CMSS1-206ENST00000491299 CDC42BPGQ6DT37 1551 aa12.43□□□□□ -0.42
CMSS1-206ENST00000491299 ABCC11Q96J66 1382 aa12.43□□□□□ -0.42
CMSS1-206ENST00000491299 NHSL1Q5SYE7 1610 aa12.42□□□□□ -0.42
CMSS1-206ENST00000491299 PDE4AP27815 886 aa12.42□□□□□ -0.42
CMSS1-206ENST00000491299 CDAN1Q8IWY9 1227 aa12.42□□□□□ -0.42
CMSS1-206ENST00000491299 C1orf167Q5SNV9 1468 aa12.41□□□□□ -0.42
CMSS1-206ENST00000491299 PPP1R15BQ5SWA1 713 aa12.41□□□□□ -0.42
CMSS1-206ENST00000491299 CFAP70Q5T0N1 1121 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms