RNA–Protein interactions for RNA: ENST00000491142.1

HPS4-215, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-215ENST00000491142 ANKRD30BQ9BXX2 1392 aa12.57□□□□□ -0.4
HPS4-215ENST00000491142 SPATA31E1Q6ZUB1 1445 aa12.57□□□□□ -0.4
HPS4-215ENST00000491142 CLSPNQ9HAW4 1339 aa12.57□□□□□ -0.4
HPS4-215ENST00000491142 SBNO1A3KN83 1393 aa12.56□□□□□ -0.4
HPS4-215ENST00000491142 RGPD8O14715 1765 aaPredicted RBP12.56□□□□□ -0.4
HPS4-215ENST00000491142 PIK3C2GO75747 1445 aa12.56□□□□□ -0.4
HPS4-215ENST00000491142 SAFB2Q14151 953 aaKnown RBP eCLIP12.56□□□□□ -0.4
HPS4-215ENST00000491142 PMFBP1Q8TBY8 1022 aa12.56□□□□□ -0.4
HPS4-215ENST00000491142 SIRT1Q96EB6 747 aa12.56□□□□□ -0.4
HPS4-215ENST00000491142 BTG4Q9NY30 223 aa12.56□□□□□ -0.4
HPS4-215ENST00000491142 KNDC1Q76NI1 1749 aa12.56□□□□□ -0.4
HPS4-215ENST00000491142 NWD2Q9ULI1 1742 aa12.56□□□□□ -0.4
HPS4-215ENST00000491142 ATXN8OSP0DMR3 200 aa12.55□□□□□ -0.4
HPS4-215ENST00000491142 R3HDM1Q15032 1099 aaKnown RBP12.55□□□□□ -0.4
HPS4-215ENST00000491142 ARHGEF10O15013 1369 aa12.55□□□□□ -0.4
HPS4-215ENST00000491142 NRXN1Q9ULB1 1477 aa12.54□□□□□ -0.4
HPS4-215ENST00000491142 C14orf93Q9H972 538 aaKnown RBP12.54□□□□□ -0.4
HPS4-215ENST00000491142 CFAP70Q5T0N1 1121 aa12.53□□□□□ -0.4
HPS4-215ENST00000491142 PRAM1Q96QH2 718 aa12.53□□□□□ -0.4
HPS4-215ENST00000491142 ABCA3Q99758 1704 aa12.53□□□□□ -0.4
HPS4-215ENST00000491142 IFT172Q9UG01 1749 aa12.53□□□□□ -0.4
HPS4-215ENST00000491142 EZH2Q15910 746 aaKnown RBP12.52□□□□□ -0.41
HPS4-215ENST00000491142 MPHOSPH9Q99550 1183 aa12.52□□□□□ -0.41
HPS4-215ENST00000491142 SPATA31A5Q5VU36 1347 aa12.51□□□□□ -0.41
HPS4-215ENST00000491142 SPATA31A7Q8IWB4 1347 aa12.51□□□□□ -0.41
HPS4-215ENST00000491142 DHX57Q6P158 1386 aaKnown RBP12.51□□□□□ -0.41
HPS4-215ENST00000491142 NRAPQ86VF7 1730 aa12.51□□□□□ -0.41
HPS4-215ENST00000491142 POGKQ9P215 609 aa12.49□□□□□ -0.41
HPS4-215ENST00000491142 TRIM37O94972 964 aa12.48□□□□□ -0.41
HPS4-215ENST00000491142 CAMKK2Q96RR4 588 aa12.48□□□□□ -0.41
HPS4-215ENST00000491142 HIRIP3Q9BW71 556 aaPredicted RBP12.48□□□□□ -0.41
HPS4-215ENST00000491142 RGPD1P0DJD0 1748 aa12.48□□□□□ -0.41
HPS4-215ENST00000491142 DISP2A7MBM2 1401 aa12.47□□□□□ -0.41
HPS4-215ENST00000491142 ANKARQ7Z5J8 1434 aa12.47□□□□□ -0.41
HPS4-215ENST00000491142 PRR36Q9H6K5 1346 aa12.47□□□□□ -0.41
HPS4-215ENST00000491142 COL14A1Q05707 1796 aaKnown RBP12.47□□□□□ -0.41
HPS4-215ENST00000491142 TRPM3Q9HCF6 1732 aaPredicted RBP12.47□□□□□ -0.41
HPS4-215ENST00000491142 GPRASP1Q5JY77 1395 aa12.46□□□□□ -0.41
HPS4-215ENST00000491142 ACIN1Q9UKV3 1341 aaKnown RBP12.46□□□□□ -0.41
HPS4-215ENST00000491142 ALS2Q96Q42 1657 aa12.45□□□□□ -0.42
HPS4-215ENST00000491142 THSD7AQ9UPZ6 1657 aa12.45□□□□□ -0.42
HPS4-215ENST00000491142 SPATA31A1Q5TZJ5 1347 aa12.45□□□□□ -0.42
HPS4-215ENST00000491142 MINK1Q8N4C8 1332 aaPredicted RBP12.45□□□□□ -0.42
HPS4-215ENST00000491142 PAK3O75914 559 aaPredicted RBP12.45□□□□□ -0.42
HPS4-215ENST00000491142 APBA3O96018 575 aa12.45□□□□□ -0.42
HPS4-215ENST00000491142 PRDM11Q9NQV5 511 aa12.45□□□□□ -0.42
HPS4-215ENST00000491142 TRAK1Q9UPV9 953 aa12.45□□□□□ -0.42
HPS4-215ENST00000491142 TNS1Q9HBL0 1735 aaKnown RBP12.45□□□□□ -0.42
HPS4-215ENST00000491142 CHRNA2Q15822 529 aa12.44□□□□□ -0.42
HPS4-215ENST00000491142 FAM196AQ6ZSG2 479 aa12.44□□□□□ -0.42
HPS4-215ENST00000491142 STRN4Q9NRL3 753 aa12.44□□□□□ -0.42
HPS4-215ENST00000491142 DLC1Q96QB1 1528 aa12.43□□□□□ -0.42
HPS4-215ENST00000491142 YY1P25490 414 aa12.43□□□□□ -0.42
HPS4-215ENST00000491142 NGDNQ8NEJ9 315 aaKnown RBP12.43□□□□□ -0.42
HPS4-215ENST00000491142 KIAA0232Q92628 1395 aa12.43□□□□□ -0.42
HPS4-215ENST00000491142 WASLO00401 505 aaPredicted RBP12.42□□□□□ -0.42
HPS4-215ENST00000491142 USP35Q9P2H5 1018 aa12.42□□□□□ -0.42
HPS4-215ENST00000491142 ADGRB2O60241 1585 aa12.42□□□□□ -0.42
HPS4-215ENST00000491142 RAB3GAP2Q9H2M9 1393 aa12.42□□□□□ -0.42
HPS4-215ENST00000491142 ZC3H6P61129 1189 aaKnown RBP12.41□□□□□ -0.42
HPS4-215ENST00000491142 CRYBG1Q9Y4K1 1723 aa12.41□□□□□ -0.42
HPS4-215ENST00000491142 ADGRB1O14514 1584 aa12.4□□□□□ -0.42
HPS4-215ENST00000491142 NUTM2GQ5VZR2 741 aa12.4□□□□□ -0.42
HPS4-215ENST00000491142 TULP4Q9NRJ4 1543 aa12.4□□□□□ -0.42
HPS4-215ENST00000491142 PARD3Q8TEW0 1356 aa12.4□□□□□ -0.42
HPS4-215ENST00000491142 PDE3BQ13370 1112 aa12.39□□□□□ -0.43
HPS4-215ENST00000491142 EIF3AQ14152 1382 aaKnown RBP12.39□□□□□ -0.43
HPS4-215ENST00000491142 EVA1CP58658 441 aa12.38□□□□□ -0.43
HPS4-215ENST00000491142 NBPF8Q3BBV2 869 aa12.38□□□□□ -0.43
HPS4-215ENST00000491142 NBPF14Q5TI25 921 aa12.38□□□□□ -0.43
HPS4-215ENST00000491142 BARGINQ6ZT62 677 aa12.38□□□□□ -0.43
HPS4-215ENST00000491142 LARP1Q6PKG0 1096 aaKnown RBP12.37□□□□□ -0.43
HPS4-215ENST00000491142 NUDT16Q96DE0 195 aaKnown RBP12.37□□□□□ -0.43
HPS4-215ENST00000491142 RBM42Q9BTD8 480 aaKnown RBP12.37□□□□□ -0.43
HPS4-215ENST00000491142 KDM2AQ9Y2K7 1162 aa12.37□□□□□ -0.43
HPS4-215ENST00000491142 ZBTB12Q9Y330 459 aaPredicted RBP12.37□□□□□ -0.43
HPS4-215ENST00000491142 ZNF316A6NFI3 1004 aaPredicted RBP12.36□□□□□ -0.43
HPS4-215ENST00000491142 SPON1Q9HCB6 807 aa12.36□□□□□ -0.43
HPS4-215ENST00000491142 PPP1R1BQ9UD71 204 aaPredicted RBP12.36□□□□□ -0.43
HPS4-215ENST00000491142 SSH2Q76I76 1423 aa12.36□□□□□ -0.43
HPS4-215ENST00000491142 RREB1Q92766 1687 aa12.35□□□□□ -0.43
HPS4-215ENST00000491142 NUP188Q5SRE5 1749 aa12.35□□□□□ -0.43
HPS4-215ENST00000491142 KCNQ2O43526 872 aa12.35□□□□□ -0.43
HPS4-215ENST00000491142 TCP11L2Q8N4U5 519 aa12.35□□□□□ -0.43
HPS4-215ENST00000491142 PHRF1Q9P1Y6 1649 aaKnown RBP12.34□□□□□ -0.43
HPS4-215ENST00000491142 UTRNP46939 3433 aa12.34□□□□□ -0.43
HPS4-215ENST00000491142 DCAF11Q8TEB1 546 aa12.34□□□□□ -0.43
HPS4-215ENST00000491142 CAMTA1Q9Y6Y1 1673 aa12.34□□□□□ -0.43
HPS4-215ENST00000491142 ATP7BP35670 1465 aa12.34□□□□□ -0.43
HPS4-215ENST00000491142 CDK19Q9BWU1 502 aa12.33□□□□□ -0.44
HPS4-215ENST00000491142 ACEP12821 1306 aa12.33□□□□□ -0.44
HPS4-215ENST00000491142 ABTB2Q8N961 1025 aa12.32□□□□□ -0.44
HPS4-215ENST00000491142 THRAP3Q9Y2W1 955 aaKnown RBP12.31□□□□□ -0.44
HPS4-215ENST00000491142 POLR3AO14802 1390 aaPredicted RBP12.3□□□□□ -0.44
HPS4-215ENST00000491142 NINLQ9Y2I6 1382 aa12.3□□□□□ -0.44
HPS4-215ENST00000491142 DIEXFQ68CQ4 756 aaKnown RBP12.3□□□□□ -0.44
HPS4-215ENST00000491142 PDGFDQ9GZP0 370 aaPredicted RBP12.3□□□□□ -0.44
HPS4-215ENST00000491142 CCDC61Q9Y6R9 512 aa12.3□□□□□ -0.44
HPS4-215ENST00000491142 NRKQ7Z2Y5 1582 aa12.3□□□□□ -0.44
HPS4-215ENST00000491142 CPDO75976 1380 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms