RNA–Protein interactions for RNA: ENST00000490111.1

RTN1-207, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-207ENST00000490111 PLEKHG1Q9ULL1 1385 aa6.57□□□□□ -1.36
RTN1-207ENST00000490111 NINLQ9Y2I6 1382 aa6.57□□□□□ -1.36
RTN1-207ENST00000490111 GLI3P10071 1580 aa6.57□□□□□ -1.36
RTN1-207ENST00000490111 PLEKHG3A1L390 1219 aa6.57□□□□□ -1.36
RTN1-207ENST00000490111 IRF5Q13568 498 aa6.57□□□□□ -1.36
RTN1-207ENST00000490111 KRT27Q7Z3Y8 459 aa6.57□□□□□ -1.36
RTN1-207ENST00000490111 CAMTA1Q9Y6Y1 1673 aa6.57□□□□□ -1.36
RTN1-207ENST00000490111 TSPY4P0CV99 314 aa6.56□□□□□ -1.36
RTN1-207ENST00000490111 TSPY10P0CW01 314 aa6.56□□□□□ -1.36
RTN1-207ENST00000490111 HDGFP51858 240 aaKnown RBP6.56□□□□□ -1.36
RTN1-207ENST00000490111 UNC5CLQ8IV45 518 aa6.56□□□□□ -1.36
RTN1-207ENST00000490111 SERPINA10Q9UK55 444 aa6.56□□□□□ -1.36
RTN1-207ENST00000490111 EIF2AK4Q9P2K8 1649 aaKnown RBP6.56□□□□□ -1.36
RTN1-207ENST00000490111 MTUS2Q5JR59 1369 aa6.56□□□□□ -1.36
RTN1-207ENST00000490111 SOS2Q07890 1332 aaPredicted RBP6.55□□□□□ -1.36
RTN1-207ENST00000490111 COL22A1Q8NFW1 1626 aaPredicted RBP6.55□□□□□ -1.36
RTN1-207ENST00000490111 GIGYF1O75420 1035 aaPredicted RBP6.55□□□□□ -1.36
RTN1-207ENST00000490111 SLC34A2O95436 690 aa6.55□□□□□ -1.36
RTN1-207ENST00000490111 SPON1Q9HCB6 807 aa6.55□□□□□ -1.36
RTN1-207ENST00000490111 AMOTL2Q9Y2J4 779 aa6.55□□□□□ -1.36
RTN1-207ENST00000490111 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.55□□□□□ -1.36
RTN1-207ENST00000490111 MARF1Q9Y4F3 1742 aaKnown RBP6.55□□□□□ -1.36
RTN1-207ENST00000490111 PIK3R4Q99570 1358 aa6.55□□□□□ -1.36
RTN1-207ENST00000490111 ADGRB3O60242 1522 aa6.55□□□□□ -1.36
RTN1-207ENST00000490111 NUBP1P53384 320 aa6.54□□□□□ -1.36
RTN1-207ENST00000490111 EZH2Q15910 746 aaKnown RBP6.54□□□□□ -1.36
RTN1-207ENST00000490111 KRI1Q8N9T8 703 aaKnown RBP6.54□□□□□ -1.36
RTN1-207ENST00000490111 USP35Q9P2H5 1018 aa6.54□□□□□ -1.36
RTN1-207ENST00000490111 LAMC1P11047 1609 aa6.54□□□□□ -1.36
RTN1-207ENST00000490111 RGPD1P0DJD0 1748 aa6.53□□□□□ -1.36
RTN1-207ENST00000490111 ZFYVE9O95405 1425 aa6.53□□□□□ -1.36
RTN1-207ENST00000490111 KCNQ2O43526 872 aa6.53□□□□□ -1.36
RTN1-207ENST00000490111 CCDC97Q96F63 343 aaPredicted RBP6.53□□□□□ -1.36
RTN1-207ENST00000490111 MYOM2P54296 1465 aa6.53□□□□□ -1.36
RTN1-207ENST00000490111 FYCO1Q9BQS8 1478 aa6.53□□□□□ -1.36
RTN1-207ENST00000490111 DISP2A7MBM2 1401 aa6.52□□□□□ -1.37
RTN1-207ENST00000490111 ADAMTS13Q76LX8 1427 aa6.52□□□□□ -1.37
RTN1-207ENST00000490111 RIMS2Q9UQ26 1411 aa6.52□□□□□ -1.37
RTN1-207ENST00000490111 FBXW7Q969H0 707 aa6.52□□□□□ -1.37
RTN1-207ENST00000490111 DDRGK1Q96HY6 314 aa6.52□□□□□ -1.37
RTN1-207ENST00000490111 SLC52A1Q9NWF4 448 aa6.52□□□□□ -1.37
RTN1-207ENST00000490111 SSUH2Q9Y2M2 353 aa6.52□□□□□ -1.37
RTN1-207ENST00000490111 TRPM2O94759 1503 aa6.51□□□□□ -1.37
RTN1-207ENST00000490111 SLIT2O94813 1529 aa6.51□□□□□ -1.37
RTN1-207ENST00000490111 EHBP1L1Q8N3D4 1523 aa6.51□□□□□ -1.37
RTN1-207ENST00000490111 CHRM1P11229 460 aaPredicted RBP6.51□□□□□ -1.37
RTN1-207ENST00000490111 VPS72Q15906 364 aa6.51□□□□□ -1.37
RTN1-207ENST00000490111 NBPF8Q3BBV2 869 aa6.51□□□□□ -1.37
RTN1-207ENST00000490111 NBPF14Q5TI25 921 aa6.51□□□□□ -1.37
RTN1-207ENST00000490111 GPIHBP1Q8IV16 184 aa6.51□□□□□ -1.37
RTN1-207ENST00000490111 FAM177A1Q8N128 213 aaPredicted RBP6.51□□□□□ -1.37
RTN1-207ENST00000490111 CAMKK2Q96RR4 588 aa6.51□□□□□ -1.37
RTN1-207ENST00000490111 ZNF692Q9BU19 519 aaPredicted RBP6.51□□□□□ -1.37
RTN1-207ENST00000490111 PCDH10Q9P2E7 1040 aa6.51□□□□□ -1.37
RTN1-207ENST00000490111 ZBTB12Q9Y330 459 aaPredicted RBP6.51□□□□□ -1.37
RTN1-207ENST00000490111 PTPRUQ92729 1446 aa6.5□□□□□ -1.37
RTN1-207ENST00000490111 ARHGEF5Q12774 1597 aa6.5□□□□□ -1.37
RTN1-207ENST00000490111 C1orf167Q5SNV9 1468 aa6.5□□□□□ -1.37
RTN1-207ENST00000490111 RPRD2Q5VT52 1461 aaKnown RBP6.5□□□□□ -1.37
RTN1-207ENST00000490111 CAPN15O75808 1086 aa6.5□□□□□ -1.37
RTN1-207ENST00000490111 MCM6Q14566 821 aa6.5□□□□□ -1.37
RTN1-207ENST00000490111 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.5□□□□□ -1.37
RTN1-207ENST00000490111 ORAI2Q96SN7 254 aa6.5□□□□□ -1.37
RTN1-207ENST00000490111 CHD4Q14839 1912 aa6.49□□□□□ -1.37
RTN1-207ENST00000490111 A0A0G2JS52 829 aa6.49□□□□□ -1.37
RTN1-207ENST00000490111 RBM26Q5T8P6 1007 aaKnown RBP6.49□□□□□ -1.37
RTN1-207ENST00000490111 GOPCQ9HD26 462 aa6.49□□□□□ -1.37
RTN1-207ENST00000490111 TNS1Q9HBL0 1735 aaKnown RBP6.49□□□□□ -1.37
RTN1-207ENST00000490111 NOS1P29475 1434 aa6.49□□□□□ -1.37
RTN1-207ENST00000490111 ADGRL3Q9HAR2 1447 aa6.49□□□□□ -1.37
RTN1-207ENST00000490111 KANK1Q14678 1352 aa6.48□□□□□ -1.37
RTN1-207ENST00000490111 PARD3Q8TEW0 1356 aa6.48□□□□□ -1.37
RTN1-207ENST00000490111 FAM182BQ5T319 152 aa6.48□□□□□ -1.37
RTN1-207ENST00000490111 DCAF8Q5TAQ9 597 aa6.48□□□□□ -1.37
RTN1-207ENST00000490111 DUOX2Q9NRD8 1548 aa6.48□□□□□ -1.37
RTN1-207ENST00000490111 MYO5BQ9ULV0 1848 aa6.48□□□□□ -1.37
RTN1-207ENST00000490111 APBA3O96018 575 aa6.47□□□□□ -1.37
RTN1-207ENST00000490111 PRELPP51888 382 aa6.47□□□□□ -1.37
RTN1-207ENST00000490111 ARIH1Q9Y4X5 557 aaPredicted RBP6.47□□□□□ -1.37
RTN1-207ENST00000490111 XRN1Q8IZH2 1706 aaKnown RBP6.47□□□□□ -1.37
RTN1-207ENST00000490111 LMTK2Q8IWU2 1503 aa6.46□□□□□ -1.37
RTN1-207ENST00000490111 GCC2Q8IWJ2 1684 aa6.46□□□□□ -1.37
RTN1-207ENST00000490111 FAM83GA6ND36 823 aa6.46□□□□□ -1.38
RTN1-207ENST00000490111 PATL2C9JE40 543 aaKnown RBP6.46□□□□□ -1.38
RTN1-207ENST00000490111 ADGRB2O60241 1585 aa6.46□□□□□ -1.38
RTN1-207ENST00000490111 HSPA6P17066 643 aa6.46□□□□□ -1.38
RTN1-207ENST00000490111 FAM98CQ17RN3 349 aaKnown RBP6.46□□□□□ -1.38
RTN1-207ENST00000490111 DHX37Q8IY37 1157 aaKnown RBP6.46□□□□□ -1.38
RTN1-207ENST00000490111 TMEM131LA2VDJ0 1609 aa6.46□□□□□ -1.38
RTN1-207ENST00000490111 RREB1Q92766 1687 aa6.45□□□□□ -1.38
RTN1-207ENST00000490111 NUP188Q5SRE5 1749 aa6.45□□□□□ -1.38
RTN1-207ENST00000490111 NALCNQ8IZF0 1738 aa6.45□□□□□ -1.38
RTN1-207ENST00000490111 CEP162Q5TB80 1403 aa6.45□□□□□ -1.38
RTN1-207ENST00000490111 TRIM37O94972 964 aa6.45□□□□□ -1.38
RTN1-207ENST00000490111 BRD2P25440 801 aaKnown RBP6.45□□□□□ -1.38
RTN1-207ENST00000490111 SYT17Q9BSW7 474 aa6.45□□□□□ -1.38
RTN1-207ENST00000490111 PLSCR2Q9NRY7 297 aa6.45□□□□□ -1.38
RTN1-207ENST00000490111 NPHP3Q7Z494 1330 aa6.45□□□□□ -1.38
RTN1-207ENST00000490111 NRKQ7Z2Y5 1582 aa6.44□□□□□ -1.38
RTN1-207ENST00000490111 PTPN23Q9H3S7 1636 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms