RNA–Protein interactions for RNA: ENST00000489852.1

SDHAF3-204, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

TSL 3

Gene SDHAF3, Length 360 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-204ENST00000489852 TECPR2O15040 1411 aa22.46■■□□□ 1.19
SDHAF3-204ENST00000489852 NRXN1Q9ULB1 1477 aa22.45■■□□□ 1.18
SDHAF3-204ENST00000489852 MYOM1P52179 1685 aa22.42■■□□□ 1.18
SDHAF3-204ENST00000489852 ZBTB7AO95365 584 aa22.42■■□□□ 1.18
SDHAF3-204ENST00000489852 SYT17Q9BSW7 474 aa22.42■■□□□ 1.18
SDHAF3-204ENST00000489852 FHDC1Q9C0D6 1143 aaPredicted RBP22.41■■□□□ 1.18
SDHAF3-204ENST00000489852 PRDM11Q9NQV5 511 aa22.41■■□□□ 1.18
SDHAF3-204ENST00000489852 CASZ1Q86V15 1759 aa22.4■■□□□ 1.18
SDHAF3-204ENST00000489852 ABCC11Q96J66 1382 aa22.4■■□□□ 1.18
SDHAF3-204ENST00000489852 PTGER2P43116 358 aa22.4■■□□□ 1.18
SDHAF3-204ENST00000489852 PPLO60437 1756 aa22.4■■□□□ 1.18
SDHAF3-204ENST00000489852 PDGFDQ9GZP0 370 aaPredicted RBP22.39■■□□□ 1.17
SDHAF3-204ENST00000489852 IFT172Q9UG01 1749 aa22.38■■□□□ 1.17
SDHAF3-204ENST00000489852 PMFBP1Q8TBY8 1022 aa22.38■■□□□ 1.17
SDHAF3-204ENST00000489852 STRN4Q9NRL3 753 aa22.38■■□□□ 1.17
SDHAF3-204ENST00000489852 USP35Q9P2H5 1018 aa22.38■■□□□ 1.17
SDHAF3-204ENST00000489852 ATF5Q9Y2D1 282 aaPredicted RBP22.38■■□□□ 1.17
SDHAF3-204ENST00000489852 ANO8Q9HCE9 1232 aaPredicted RBP22.37■■□□□ 1.17
SDHAF3-204ENST00000489852 TMEM132EQ6IEE7 984 aa22.36■■□□□ 1.17
SDHAF3-204ENST00000489852 KNDC1Q76NI1 1749 aa22.35■■□□□ 1.17
SDHAF3-204ENST00000489852 BARGINQ6ZT62 677 aa22.34■■□□□ 1.17
SDHAF3-204ENST00000489852 LOC105371045A0A1W2PR82 267 aa22.33■■□□□ 1.17
SDHAF3-204ENST00000489852 TRPM3Q9HCF6 1732 aaPredicted RBP22.33■■□□□ 1.17
SDHAF3-204ENST00000489852 ADGRF5Q8IZF2 1346 aa22.32■■□□□ 1.16
SDHAF3-204ENST00000489852 ALS2Q96Q42 1657 aa22.32■■□□□ 1.16
SDHAF3-204ENST00000489852 GPRASP1Q5JY77 1395 aa22.3■■□□□ 1.16
SDHAF3-204ENST00000489852 PLSCR1O15162 318 aa22.3■■□□□ 1.16
SDHAF3-204ENST00000489852 CHRNA2Q15822 529 aa22.3■■□□□ 1.16
SDHAF3-204ENST00000489852 BCL11BQ9C0K0 894 aaPredicted RBP22.3■■□□□ 1.16
SDHAF3-204ENST00000489852 DLC1Q96QB1 1528 aa22.3■■□□□ 1.16
SDHAF3-204ENST00000489852 ITGAEP38570 1179 aa22.29■■□□□ 1.16
SDHAF3-204ENST00000489852 KIAA0232Q92628 1395 aa22.28■■□□□ 1.16
SDHAF3-204ENST00000489852 RGPD3A6NKT7 1758 aaPredicted RBP22.28■■□□□ 1.16
SDHAF3-204ENST00000489852 RGPD4Q7Z3J3 1758 aa22.28■■□□□ 1.16
SDHAF3-204ENST00000489852 C11orf95C9JLR9 678 aaPredicted RBP22.28■■□□□ 1.16
SDHAF3-204ENST00000489852 EVA1CP58658 441 aa22.28■■□□□ 1.16
SDHAF3-204ENST00000489852 SIRT1Q96EB6 747 aa22.28■■□□□ 1.16
SDHAF3-204ENST00000489852 YTHDC2Q9H6S0 1430 aaKnown RBP22.28■■□□□ 1.16
SDHAF3-204ENST00000489852 GPR162Q16538 588 aa22.27■■□□□ 1.16
SDHAF3-204ENST00000489852 CRYBG1Q9Y4K1 1723 aa22.27■■□□□ 1.16
SDHAF3-204ENST00000489852 TCP11L2Q8N4U5 519 aa22.25■■□□□ 1.15
SDHAF3-204ENST00000489852 PAK3O75914 559 aaPredicted RBP22.24■■□□□ 1.15
SDHAF3-204ENST00000489852 MTFR1LQ9H019 292 aa22.24■■□□□ 1.15
SDHAF3-204ENST00000489852 ANKARQ7Z5J8 1434 aa22.23■■□□□ 1.15
SDHAF3-204ENST00000489852 SAFB2Q14151 953 aaKnown RBP eCLIP22.23■■□□□ 1.15
SDHAF3-204ENST00000489852 ACIN1Q9UKV3 1341 aaKnown RBP22.23■■□□□ 1.15
SDHAF3-204ENST00000489852 SSH2Q76I76 1423 aa22.23■■□□□ 1.15
SDHAF3-204ENST00000489852 SGIP1Q9BQI5 828 aa22.22■■□□□ 1.15
SDHAF3-204ENST00000489852 STK32BQ9NY57 414 aa22.22■■□□□ 1.15
SDHAF3-204ENST00000489852 ZC3H6P61129 1189 aaKnown RBP22.21■■□□□ 1.15
SDHAF3-204ENST00000489852 LARP1Q6PKG0 1096 aaKnown RBP22.21■■□□□ 1.15
SDHAF3-204ENST00000489852 ARXQ96QS3 562 aa22.21■■□□□ 1.15
SDHAF3-204ENST00000489852 PROM2Q8N271 834 aa22.2■■□□□ 1.14
SDHAF3-204ENST00000489852 OVOS2A0A0G2JMS6 1433 aa22.2■■□□□ 1.14
SDHAF3-204ENST00000489852 OVOS2A0A0J9YW53 1432 aa22.2■■□□□ 1.14
SDHAF3-204ENST00000489852 OVOS2Q6IE36 1432 aa22.2■■□□□ 1.14
SDHAF3-204ENST00000489852 SHANK3Q9BYB0 1731 aa22.2■■□□□ 1.14
SDHAF3-204ENST00000489852 MAP3K5Q99683 1374 aa22.19■■□□□ 1.14
SDHAF3-204ENST00000489852 SLC15A2Q16348 729 aa22.18■■□□□ 1.14
SDHAF3-204ENST00000489852 PRAM1Q96QH2 718 aa22.18■■□□□ 1.14
SDHAF3-204ENST00000489852 THRAP3Q9Y2W1 955 aaKnown RBP22.18■■□□□ 1.14
SDHAF3-204ENST00000489852 RGL3Q3MIN7 710 aa22.17■■□□□ 1.14
SDHAF3-204ENST00000489852 ANKRD30BQ9BXX2 1392 aa22.16■■□□□ 1.14
SDHAF3-204ENST00000489852 PARP4Q9UKK3 1724 aaKnown RBP22.16■■□□□ 1.14
SDHAF3-204ENST00000489852 SBF2Q86WG5 1849 aa22.15■■□□□ 1.14
SDHAF3-204ENST00000489852 PEAK1Q9H792 1746 aa22.15■■□□□ 1.14
SDHAF3-204ENST00000489852 HSPA6P17066 643 aa22.15■■□□□ 1.14
SDHAF3-204ENST00000489852 PTF1AQ7RTS3 328 aa22.15■■□□□ 1.14
SDHAF3-204ENST00000489852 NGDNQ8NEJ9 315 aaKnown RBP22.15■■□□□ 1.14
SDHAF3-204ENST00000489852 PIK3C2GO75747 1445 aa22.14■■□□□ 1.14
SDHAF3-204ENST00000489852 PELP1Q8IZL8 1130 aaKnown RBP22.14■■□□□ 1.13
SDHAF3-204ENST00000489852 DHX57Q6P158 1386 aaKnown RBP22.13■■□□□ 1.13
SDHAF3-204ENST00000489852 PHRF1Q9P1Y6 1649 aaKnown RBP22.13■■□□□ 1.13
SDHAF3-204ENST00000489852 GOLGB1Q14789 3259 aaKnown RBP22.13■■□□□ 1.13
SDHAF3-204ENST00000489852 POGKQ9P215 609 aa22.12■■□□□ 1.13
SDHAF3-204ENST00000489852 TXNRD1Q16881 649 aa22.11■■□□□ 1.13
SDHAF3-204ENST00000489852 PRR36Q9H6K5 1346 aa22.1■■□□□ 1.13
SDHAF3-204ENST00000489852 NUTM2GQ5VZR2 741 aa22.09■■□□□ 1.13
SDHAF3-204ENST00000489852 KLHL34Q8N239 644 aa22.08■■□□□ 1.13
SDHAF3-204ENST00000489852 HIRIP3Q9BW71 556 aaPredicted RBP22.08■■□□□ 1.13
SDHAF3-204ENST00000489852 C14orf93Q9H972 538 aaKnown RBP22.08■■□□□ 1.13
SDHAF3-204ENST00000489852 ATP7BP35670 1465 aa22.08■■□□□ 1.12
SDHAF3-204ENST00000489852 DDB1Q16531 1140 aa22.07■■□□□ 1.12
SDHAF3-204ENST00000489852 SLC4A1APQ9BWU0 796 aaKnown RBP22.07■■□□□ 1.12
SDHAF3-204ENST00000489852 EIF3AQ14152 1382 aaKnown RBP22.07■■□□□ 1.12
SDHAF3-204ENST00000489852 SPATA31E1Q6ZUB1 1445 aa22.05■■□□□ 1.12
SDHAF3-204ENST00000489852 ATP10DQ9P241 1426 aa22.04■■□□□ 1.12
SDHAF3-204ENST00000489852 LMO7Q8WWI1 1683 aa22.04■■□□□ 1.12
SDHAF3-204ENST00000489852 TULP4Q9NRJ4 1543 aa22.03■■□□□ 1.12
SDHAF3-204ENST00000489852 CFAP70Q5T0N1 1121 aa22.03■■□□□ 1.12
SDHAF3-204ENST00000489852 GPBP1L1Q9HC44 474 aaPredicted RBP22.03■■□□□ 1.12
SDHAF3-204ENST00000489852 LRRC37A3O60309 1634 aa22.02■■□□□ 1.12
SDHAF3-204ENST00000489852 CPDO75976 1380 aa22.01■■□□□ 1.11
SDHAF3-204ENST00000489852 CRB1P82279 1406 aa22.01■■□□□ 1.11
SDHAF3-204ENST00000489852 MINK1Q8N4C8 1332 aaPredicted RBP22.01■■□□□ 1.11
SDHAF3-204ENST00000489852 GRIN3BO60391 1043 aa22■■□□□ 1.11
SDHAF3-204ENST00000489852 CAPN15O75808 1086 aa22■■□□□ 1.11
SDHAF3-204ENST00000489852 COL5A2P05997 1499 aaPredicted RBP22■■□□□ 1.11
SDHAF3-204ENST00000489852 WASLO00401 505 aaPredicted RBP21.99■■□□□ 1.11
SDHAF3-204ENST00000489852 MARCH10Q8NA82 808 aaPredicted RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms