RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 ABL2P42684 1182 aa11.29□□□□□ -0.6
VPS26A-206ENST00000489794 WASHC4Q2M389 1173 aa11.29□□□□□ -0.6
VPS26A-206ENST00000489794 NBPF14Q5TI25 921 aa11.29□□□□□ -0.6
VPS26A-206ENST00000489794 PPP1R18Q6NYC8 613 aa11.29□□□□□ -0.6
VPS26A-206ENST00000489794 POM121Q96HA1 1249 aa11.29□□□□□ -0.6
VPS26A-206ENST00000489794 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.29□□□□□ -0.6
VPS26A-206ENST00000489794 MAP10Q9P2G4 905 aa11.29□□□□□ -0.6
VPS26A-206ENST00000489794 RNF223E7ERA6 249 aa11.27□□□□□ -0.61
VPS26A-206ENST00000489794 TRAK2O60296 914 aa11.27□□□□□ -0.61
VPS26A-206ENST00000489794 EPS8L1Q8TE68 723 aa11.27□□□□□ -0.61
VPS26A-206ENST00000489794 ZBTB24O43167 697 aaPredicted RBP11.26□□□□□ -0.61
VPS26A-206ENST00000489794 FNBP4Q8N3X1 1017 aaPredicted RBP11.26□□□□□ -0.61
VPS26A-206ENST00000489794 UNC93B1Q9H1C4 597 aa11.26□□□□□ -0.61
VPS26A-206ENST00000489794 GPSM3Q9Y4H4 160 aa11.26□□□□□ -0.61
VPS26A-206ENST00000489794 PDXDC2PQ6P474 469 aa11.23□□□□□ -0.61
VPS26A-206ENST00000489794 ZNF592Q92610 1267 aa11.23□□□□□ -0.61
VPS26A-206ENST00000489794 PRKD2Q9BZL6 878 aa11.23□□□□□ -0.61
VPS26A-206ENST00000489794 ZNF330Q9Y3S2 320 aaPredicted RBP11.23□□□□□ -0.61
VPS26A-206ENST00000489794 RPIAP49247 311 aa11.22□□□□□ -0.61
VPS26A-206ENST00000489794 LAPTM4AQ15012 233 aa11.22□□□□□ -0.61
VPS26A-206ENST00000489794 V9GY48 417 aaPredicted RBP11.22□□□□□ -0.61
VPS26A-206ENST00000489794 PPEF1O14829 653 aaPredicted RBP11.21□□□□□ -0.61
VPS26A-206ENST00000489794 GPR37L1O60883 481 aa11.21□□□□□ -0.61
VPS26A-206ENST00000489794 PTK2Q05397 1052 aa11.21□□□□□ -0.61
VPS26A-206ENST00000489794 PTCRAQ6ISU1 281 aaPredicted RBP11.21□□□□□ -0.61
VPS26A-206ENST00000489794 SOX11P35716 441 aa11.2□□□□□ -0.62
VPS26A-206ENST00000489794 IRF5Q13568 498 aa11.2□□□□□ -0.62
VPS26A-206ENST00000489794 ZBBXA8MT70 800 aa11.19□□□□□ -0.62
VPS26A-206ENST00000489794 NR1H3Q13133 447 aa11.19□□□□□ -0.62
VPS26A-206ENST00000489794 CD2BP2O95400 341 aaKnown RBP11.18□□□□□ -0.62
VPS26A-206ENST00000489794 WNT7BP56706 349 aa11.17□□□□□ -0.62
VPS26A-206ENST00000489794 MCCD1P59942 119 aaPredicted RBP11.17□□□□□ -0.62
VPS26A-206ENST00000489794 Q6ZNB5 142 aa11.17□□□□□ -0.62
VPS26A-206ENST00000489794 BPHLQ86WA6 291 aaPredicted RBP11.17□□□□□ -0.62
VPS26A-206ENST00000489794 GFRA3O60609 400 aa11.16□□□□□ -0.62
VPS26A-206ENST00000489794 EIF4G2P78344 907 aaKnown RBP eCLIP11.16□□□□□ -0.62
VPS26A-206ENST00000489794 ZNF511Q8NB15 262 aa11.16□□□□□ -0.62
VPS26A-206ENST00000489794 TRIM32Q13049 653 aa11.15□□□□□ -0.62
VPS26A-206ENST00000489794 BAP1Q92560 729 aa11.15□□□□□ -0.62
VPS26A-206ENST00000489794 ARHGAP9Q9BRR9 750 aa11.15□□□□□ -0.62
VPS26A-206ENST00000489794 PLA2G2CQ5R387 149 aa11.14□□□□□ -0.63
VPS26A-206ENST00000489794 SH3BP5LQ7L8J4 393 aa11.14□□□□□ -0.63
VPS26A-206ENST00000489794 FBXO45P0C2W1 286 aa11.13□□□□□ -0.63
VPS26A-206ENST00000489794 VAC14Q08AM6 782 aa11.13□□□□□ -0.63
VPS26A-206ENST00000489794 ZBTB33Q86T24 672 aa11.13□□□□□ -0.63
VPS26A-206ENST00000489794 AGERQ15109 404 aa11.12□□□□□ -0.63
VPS26A-206ENST00000489794 SUPT5HO00267 1087 aaKnown RBP11.11□□□□□ -0.63
VPS26A-206ENST00000489794 SLC19A1P41440 591 aa11.11□□□□□ -0.63
VPS26A-206ENST00000489794 SH3RF1Q7Z6J0 888 aa11.11□□□□□ -0.63
VPS26A-206ENST00000489794 ZNF777Q9ULD5 760 aaPredicted RBP11.11□□□□□ -0.63
VPS26A-206ENST00000489794 SH3BP2P78314 561 aa11.1□□□□□ -0.63
VPS26A-206ENST00000489794 SEMA3FQ13275 785 aa11.1□□□□□ -0.63
VPS26A-206ENST00000489794 LINC01559Q495D7 138 aa11.1□□□□□ -0.63
VPS26A-206ENST00000489794 CALR3Q96L12 384 aaKnown RBP11.09□□□□□ -0.63
VPS26A-206ENST00000489794 CDV3Q9UKY7 258 aaKnown RBP11.09□□□□□ -0.63
VPS26A-206ENST00000489794 VARSP26640 1264 aaKnown RBP11.08□□□□□ -0.64
VPS26A-206ENST00000489794 LIAT1Q6ZQX7 453 aa11.08□□□□□ -0.64
VPS26A-206ENST00000489794 ADAM32Q8TC27 787 aa11.08□□□□□ -0.64
VPS26A-206ENST00000489794 MAGEB6P1A0A0J9YX57 407 aa11.07□□□□□ -0.64
VPS26A-206ENST00000489794 NRG2O14511 850 aaPredicted RBP11.07□□□□□ -0.64
VPS26A-206ENST00000489794 GLMNQ92990 594 aa11.07□□□□□ -0.64
VPS26A-206ENST00000489794 ALG2Q9H553 416 aa11.07□□□□□ -0.64
VPS26A-206ENST00000489794 POM121CA8CG34 1229 aa11.06□□□□□ -0.64
VPS26A-206ENST00000489794 FAM174AQ8TBP5 190 aa11.06□□□□□ -0.64
VPS26A-206ENST00000489794 FOXJ1Q92949 421 aa11.06□□□□□ -0.64
VPS26A-206ENST00000489794 OCSTAMPQ9BR26 566 aa11.06□□□□□ -0.64
VPS26A-206ENST00000489794 SERPINA10Q9UK55 444 aa11.06□□□□□ -0.64
VPS26A-206ENST00000489794 HDGFL1Q5TGJ6 251 aa11.05□□□□□ -0.64
VPS26A-206ENST00000489794 TRMT44Q8IYL2 757 aaKnown RBP11.05□□□□□ -0.64
VPS26A-206ENST00000489794 SLC10A4Q96EP9 437 aa11.05□□□□□ -0.64
VPS26A-206ENST00000489794 CCDC97Q96F63 343 aaPredicted RBP11.05□□□□□ -0.64
VPS26A-206ENST00000489794 C1QTNF2Q9BXJ5 285 aa11.05□□□□□ -0.64
VPS26A-206ENST00000489794 CARD14Q9BXL6 1004 aa11.05□□□□□ -0.64
VPS26A-206ENST00000489794 PDZRN3Q9UPQ7 1066 aa11.05□□□□□ -0.64
VPS26A-206ENST00000489794 ARID3CA6NKF2 412 aa11.04□□□□□ -0.64
VPS26A-206ENST00000489794 SKOR1P84550 965 aa11.04□□□□□ -0.64
VPS26A-206ENST00000489794 SPRYD7Q5W111 196 aa11.04□□□□□ -0.64
VPS26A-206ENST00000489794 DZIP3Q86Y13 1208 aaKnown RBP11.04□□□□□ -0.64
VPS26A-206ENST00000489794 EHBP1Q8NDI1 1231 aa11.04□□□□□ -0.64
VPS26A-206ENST00000489794 PCDHB9Q9Y5E1 797 aa11.04□□□□□ -0.64
VPS26A-206ENST00000489794 ERFEQ4G0M1 354 aa11.03□□□□□ -0.64
VPS26A-206ENST00000489794 TRAF7Q6Q0C0 670 aa11.03□□□□□ -0.64
VPS26A-206ENST00000489794 ZNF598Q86UK7 904 aaKnown RBP11.03□□□□□ -0.64
VPS26A-206ENST00000489794 CCDC125Q86Z20 511 aa11.03□□□□□ -0.64
VPS26A-206ENST00000489794 WNT7AO00755 349 aa11.02□□□□□ -0.65
VPS26A-206ENST00000489794 NBPF20Q3BBV1 942 aa11.02□□□□□ -0.65
VPS26A-206ENST00000489794 C4orf48Q5BLP8 95 aa11.02□□□□□ -0.65
VPS26A-206ENST00000489794 RC3H1Q5TC82 1133 aaKnown RBP11.02□□□□□ -0.65
VPS26A-206ENST00000489794 EMID1Q96A84 441 aaPredicted RBP11.02□□□□□ -0.65
VPS26A-206ENST00000489794 MPNDQ8N594 471 aa11.01□□□□□ -0.65
VPS26A-206ENST00000489794 MAP4K5Q9Y4K4 846 aa11.01□□□□□ -0.65
VPS26A-206ENST00000489794 ZNF697Q5TEC3 545 aa11□□□□□ -0.65
VPS26A-206ENST00000489794 TRIM52Q96A61 297 aa11□□□□□ -0.65
VPS26A-206ENST00000489794 RNF20Q5VTR2 975 aa10.99□□□□□ -0.65
VPS26A-206ENST00000489794 NFATC2IPQ8NCF5 419 aa10.99□□□□□ -0.65
VPS26A-206ENST00000489794 ADAMTS19Q8TE59 1207 aa10.99□□□□□ -0.65
VPS26A-206ENST00000489794 C1orf115Q9H7X2 142 aa10.99□□□□□ -0.65
VPS26A-206ENST00000489794 SEPT12Q8IYM1 358 aa10.98□□□□□ -0.65
VPS26A-206ENST00000489794 CCDC82Q8N4S0 544 aa10.98□□□□□ -0.65
VPS26A-206ENST00000489794 CEP126Q9P2H0 1117 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms