RNA–Protein interactions for RNA: ENST00000489638.5

LTA-216, Transcript of lymphotoxin alpha, humanhuman

TSL 5

Gene LTA, Length 1,377 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-216ENST00000489638 A0A0G2JS52 829 aa19.1■□□□□ 0.65
LTA-216ENST00000489638 MYT1Q01538 1121 aa19.1■□□□□ 0.65
LTA-216ENST00000489638 THSD7AQ9UPZ6 1657 aa19.09■□□□□ 0.65
LTA-216ENST00000489638 ATP7BP35670 1465 aa19.08■□□□□ 0.65
LTA-216ENST00000489638 KDM2AQ9Y2K7 1162 aa19.08■□□□□ 0.65
LTA-216ENST00000489638 ARHGEF28Q8N1W1 1705 aaKnown RBP19.08■□□□□ 0.65
LTA-216ENST00000489638 SPATA31A5Q5VU36 1347 aa19.08■□□□□ 0.64
LTA-216ENST00000489638 SPATA31A7Q8IWB4 1347 aa19.08■□□□□ 0.64
LTA-216ENST00000489638 DCAF11Q8TEB1 546 aa19.07■□□□□ 0.64
LTA-216ENST00000489638 BAG6P46379 1132 aa19.06■□□□□ 0.64
LTA-216ENST00000489638 NGDNQ8NEJ9 315 aaKnown RBP19.06■□□□□ 0.64
LTA-216ENST00000489638 RGPD1P0DJD0 1748 aa19.05■□□□□ 0.64
LTA-216ENST00000489638 ITSN1Q15811 1721 aa19.05■□□□□ 0.64
LTA-216ENST00000489638 PRDM11Q9NQV5 511 aa19.05■□□□□ 0.64
LTA-216ENST00000489638 PAK3O75914 559 aaPredicted RBP19.04■□□□□ 0.64
LTA-216ENST00000489638 STAC3Q96MF2 364 aa19.04■□□□□ 0.64
LTA-216ENST00000489638 PHRF1Q9P1Y6 1649 aaKnown RBP19.03■□□□□ 0.64
LTA-216ENST00000489638 PSDA5PKW4 1024 aaPredicted RBP19.03■□□□□ 0.64
LTA-216ENST00000489638 FAM182BQ5T319 152 aa19.03■□□□□ 0.64
LTA-216ENST00000489638 TNS1Q9HBL0 1735 aaKnown RBP19.03■□□□□ 0.64
LTA-216ENST00000489638 DISP2A7MBM2 1401 aa19.02■□□□□ 0.64
LTA-216ENST00000489638 KIAA0232Q92628 1395 aa19.02■□□□□ 0.64
LTA-216ENST00000489638 TOPAZ1Q8N9V7 1692 aa19.02■□□□□ 0.63
LTA-216ENST00000489638 NUDT16Q96DE0 195 aaKnown RBP19.01■□□□□ 0.63
LTA-216ENST00000489638 HRCP23327 699 aa19■□□□□ 0.63
LTA-216ENST00000489638 EN1Q05925 392 aaPredicted RBP19■□□□□ 0.63
LTA-216ENST00000489638 SPATA31A1Q5TZJ5 1347 aa19■□□□□ 0.63
LTA-216ENST00000489638 POLR3AO14802 1390 aaPredicted RBP18.99■□□□□ 0.63
LTA-216ENST00000489638 CHRNA2Q15822 529 aa18.98■□□□□ 0.63
LTA-216ENST00000489638 NRKQ7Z2Y5 1582 aa18.97■□□□□ 0.63
LTA-216ENST00000489638 CDK19Q9BWU1 502 aa18.96■□□□□ 0.63
LTA-216ENST00000489638 STRN4Q9NRL3 753 aa18.95■□□□□ 0.62
LTA-216ENST00000489638 ZC3H6P61129 1189 aaKnown RBP18.94■□□□□ 0.62
LTA-216ENST00000489638 NUTM2GQ5VZR2 741 aa18.94■□□□□ 0.62
LTA-216ENST00000489638 ACEP12821 1306 aa18.94■□□□□ 0.62
LTA-216ENST00000489638 SSH2Q76I76 1423 aa18.94■□□□□ 0.62
LTA-216ENST00000489638 KIAA1210Q9ULL0 1709 aa18.94■□□□□ 0.62
LTA-216ENST00000489638 LMO7Q8WWI1 1683 aa18.93■□□□□ 0.62
LTA-216ENST00000489638 R3HDM1Q15032 1099 aaKnown RBP18.93■□□□□ 0.62
LTA-216ENST00000489638 EZH2Q15910 746 aaKnown RBP18.93■□□□□ 0.62
LTA-216ENST00000489638 NBPF8Q3BBV2 869 aa18.93■□□□□ 0.62
LTA-216ENST00000489638 CCDC61Q9Y6R9 512 aa18.93■□□□□ 0.62
LTA-216ENST00000489638 CAMTA1Q9Y6Y1 1673 aa18.92■□□□□ 0.62
LTA-216ENST00000489638 PLEKHG3A1L390 1219 aa18.92■□□□□ 0.62
LTA-216ENST00000489638 FAM196AQ6ZSG2 479 aa18.92■□□□□ 0.62
LTA-216ENST00000489638 CPDO75976 1380 aa18.91■□□□□ 0.62
LTA-216ENST00000489638 USP19O94966 1318 aa18.91■□□□□ 0.62
LTA-216ENST00000489638 TRIM37O94972 964 aa18.91■□□□□ 0.62
LTA-216ENST00000489638 BARGINQ6ZT62 677 aa18.91■□□□□ 0.62
LTA-216ENST00000489638 CAMKK2Q96RR4 588 aa18.91■□□□□ 0.62
LTA-216ENST00000489638 USP35Q9P2H5 1018 aa18.9■□□□□ 0.62
LTA-216ENST00000489638 PARD3Q8TEW0 1356 aa18.89■□□□□ 0.61
LTA-216ENST00000489638 LARP1Q6PKG0 1096 aaKnown RBP18.88■□□□□ 0.61
LTA-216ENST00000489638 ABTB2Q8N961 1025 aa18.88■□□□□ 0.61
LTA-216ENST00000489638 RREB1Q92766 1687 aa18.87■□□□□ 0.61
LTA-216ENST00000489638 NBPF1Q3BBV0 1214 aa18.87■□□□□ 0.61
LTA-216ENST00000489638 PPIP5K1Q6PFW1 1433 aa18.87■□□□□ 0.61
LTA-216ENST00000489638 APBA3O96018 575 aa18.86■□□□□ 0.61
LTA-216ENST00000489638 EVA1CP58658 441 aa18.86■□□□□ 0.61
LTA-216ENST00000489638 COL5A2P05997 1499 aaPredicted RBP18.85■□□□□ 0.61
LTA-216ENST00000489638 TCP11L2Q8N4U5 519 aa18.85■□□□□ 0.61
LTA-216ENST00000489638 NUP188Q5SRE5 1749 aa18.85■□□□□ 0.61
LTA-216ENST00000489638 PDE3BQ13370 1112 aa18.84■□□□□ 0.61
LTA-216ENST00000489638 PARP4Q9UKK3 1724 aaKnown RBP18.83■□□□□ 0.6
LTA-216ENST00000489638 CENPJQ9HC77 1338 aaPredicted RBP18.83■□□□□ 0.6
LTA-216ENST00000489638 GCP02774 474 aa18.82■□□□□ 0.6
LTA-216ENST00000489638 SRPK2P78362 688 aaKnown RBP18.82■□□□□ 0.6
LTA-216ENST00000489638 NLRP13Q86W25 1043 aa18.82■□□□□ 0.6
LTA-216ENST00000489638 CABP2Q9NPB3 220 aa18.81■□□□□ 0.6
LTA-216ENST00000489638 THRAP3Q9Y2W1 955 aaKnown RBP18.81■□□□□ 0.6
LTA-216ENST00000489638 BRD4O60885 1362 aaPredicted RBP18.81■□□□□ 0.6
LTA-216ENST00000489638 QRICH2Q9H0J4 1663 aa18.81■□□□□ 0.6
LTA-216ENST00000489638 USP6P35125 1406 aa18.81■□□□□ 0.6
LTA-216ENST00000489638 SLIT3O75094 1523 aa18.81■□□□□ 0.6
LTA-216ENST00000489638 CRB1P82279 1406 aa18.8■□□□□ 0.6
LTA-216ENST00000489638 PEAK1Q9H792 1746 aa18.79■□□□□ 0.6
LTA-216ENST00000489638 LRRC37A3O60309 1634 aa18.78■□□□□ 0.6
LTA-216ENST00000489638 AATKQ6ZMQ8 1374 aa18.77■□□□□ 0.6
LTA-216ENST00000489638 PIK3C2AO00443 1686 aa18.76■□□□□ 0.59
LTA-216ENST00000489638 OVOS2A0A0G2JMS6 1433 aa18.76■□□□□ 0.59
LTA-216ENST00000489638 OVOS2A0A0J9YW53 1432 aa18.76■□□□□ 0.59
LTA-216ENST00000489638 OVOS2Q6IE36 1432 aa18.76■□□□□ 0.59
LTA-216ENST00000489638 CABP1Q9NZU7 370 aa18.76■□□□□ 0.59
LTA-216ENST00000489638 COL18A1P39060 1754 aa18.74■□□□□ 0.59
LTA-216ENST00000489638 NLRP6P59044 892 aa18.74■□□□□ 0.59
LTA-216ENST00000489638 NBPF14Q5TI25 921 aa18.74■□□□□ 0.59
LTA-216ENST00000489638 RGPD3A6NKT7 1758 aaPredicted RBP18.74■□□□□ 0.59
LTA-216ENST00000489638 RGPD4Q7Z3J3 1758 aa18.74■□□□□ 0.59
LTA-216ENST00000489638 ZBTB7CA1YPR0 619 aa18.73■□□□□ 0.59
LTA-216ENST00000489638 C11orf95C9JLR9 678 aaPredicted RBP18.73■□□□□ 0.59
LTA-216ENST00000489638 WNK3Q9BYP7 1800 aa18.72■□□□□ 0.59
LTA-216ENST00000489638 CPSF1Q10570 1443 aaKnown RBP18.72■□□□□ 0.59
LTA-216ENST00000489638 TRPM1Q7Z4N2 1603 aa18.71■□□□□ 0.58
LTA-216ENST00000489638 SBF2Q86WG5 1849 aa18.7■□□□□ 0.58
LTA-216ENST00000489638 DDB1Q16531 1140 aa18.69■□□□□ 0.58
LTA-216ENST00000489638 TOM1L2Q6ZVM7 507 aa18.69■□□□□ 0.58
LTA-216ENST00000489638 L3MBTL2Q969R5 705 aa18.69■□□□□ 0.58
LTA-216ENST00000489638 AXIN2Q9Y2T1 843 aa18.69■□□□□ 0.58
LTA-216ENST00000489638 EVC2Q86UK5 1308 aa18.69■□□□□ 0.58
LTA-216ENST00000489638 WDR17Q8IZU2 1322 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms