RNA–Protein interactions for RNA: ENST00000489548.1

PHACTR1-210, Transcript of phosphatase and actin regulator 1, humanhuman

TSL 5

Gene PHACTR1, Length 568 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1-210ENST00000489548 CENPBP07199 599 aaPredicted RBP13.34□□□□□ -0.27
PHACTR1-210ENST00000489548 SPATA31A5Q5VU36 1347 aa13.34□□□□□ -0.27
PHACTR1-210ENST00000489548 SPATA31A7Q8IWB4 1347 aa13.34□□□□□ -0.27
PHACTR1-210ENST00000489548 GPRASP1Q5JY77 1395 aa13.33□□□□□ -0.27
PHACTR1-210ENST00000489548 R3HDM1Q15032 1099 aaKnown RBP13.33□□□□□ -0.28
PHACTR1-210ENST00000489548 HIRIP3Q9BW71 556 aaPredicted RBP13.33□□□□□ -0.28
PHACTR1-210ENST00000489548 NEUROD1Q13562 356 aa13.32□□□□□ -0.28
PHACTR1-210ENST00000489548 NRAPQ86VF7 1730 aa13.32□□□□□ -0.28
PHACTR1-210ENST00000489548 PRR36Q9H6K5 1346 aa13.32□□□□□ -0.28
PHACTR1-210ENST00000489548 DLC1Q96QB1 1528 aa13.31□□□□□ -0.28
PHACTR1-210ENST00000489548 SIN3AQ96ST3 1273 aa13.31□□□□□ -0.28
PHACTR1-210ENST00000489548 TRAK1Q9UPV9 953 aa13.31□□□□□ -0.28
PHACTR1-210ENST00000489548 TRPM3Q9HCF6 1732 aaPredicted RBP13.3□□□□□ -0.28
PHACTR1-210ENST00000489548 COL14A1Q05707 1796 aaKnown RBP13.3□□□□□ -0.28
PHACTR1-210ENST00000489548 PAK3O75914 559 aaPredicted RBP13.3□□□□□ -0.28
PHACTR1-210ENST00000489548 EZH2Q15910 746 aaKnown RBP13.3□□□□□ -0.28
PHACTR1-210ENST00000489548 NGDNQ8NEJ9 315 aaKnown RBP13.3□□□□□ -0.28
PHACTR1-210ENST00000489548 PRDM11Q9NQV5 511 aa13.3□□□□□ -0.28
PHACTR1-210ENST00000489548 MINK1Q8N4C8 1332 aaPredicted RBP13.3□□□□□ -0.28
PHACTR1-210ENST00000489548 DISP2A7MBM2 1401 aa13.3□□□□□ -0.28
PHACTR1-210ENST00000489548 ALS2Q96Q42 1657 aa13.29□□□□□ -0.28
PHACTR1-210ENST00000489548 WASLO00401 505 aaPredicted RBP13.29□□□□□ -0.28
PHACTR1-210ENST00000489548 CAMKK2Q96RR4 588 aa13.29□□□□□ -0.28
PHACTR1-210ENST00000489548 EIF3AQ14152 1382 aaKnown RBP13.29□□□□□ -0.28
PHACTR1-210ENST00000489548 ADGRB2O60241 1585 aa13.28□□□□□ -0.28
PHACTR1-210ENST00000489548 RGPD1P0DJD0 1748 aa13.28□□□□□ -0.28
PHACTR1-210ENST00000489548 TRIM37O94972 964 aa13.28□□□□□ -0.28
PHACTR1-210ENST00000489548 FAM196AQ6ZSG2 479 aa13.28□□□□□ -0.28
PHACTR1-210ENST00000489548 SPATA31A1Q5TZJ5 1347 aa13.28□□□□□ -0.28
PHACTR1-210ENST00000489548 ADGRB1O14514 1584 aa13.27□□□□□ -0.29
PHACTR1-210ENST00000489548 THSD7AQ9UPZ6 1657 aa13.27□□□□□ -0.29
PHACTR1-210ENST00000489548 APBA3O96018 575 aa13.26□□□□□ -0.29
PHACTR1-210ENST00000489548 CHRNA2Q15822 529 aa13.26□□□□□ -0.29
PHACTR1-210ENST00000489548 KIAA0232Q92628 1395 aa13.26□□□□□ -0.29
PHACTR1-210ENST00000489548 TULP4Q9NRJ4 1543 aa13.26□□□□□ -0.29
PHACTR1-210ENST00000489548 STRN4Q9NRL3 753 aa13.26□□□□□ -0.29
PHACTR1-210ENST00000489548 KDM2AQ9Y2K7 1162 aa13.25□□□□□ -0.29
PHACTR1-210ENST00000489548 ZC3H6P61129 1189 aaKnown RBP13.24□□□□□ -0.29
PHACTR1-210ENST00000489548 TNS1Q9HBL0 1735 aaKnown RBP13.24□□□□□ -0.29
PHACTR1-210ENST00000489548 CRYBG1Q9Y4K1 1723 aa13.23□□□□□ -0.29
PHACTR1-210ENST00000489548 DCAF11Q8TEB1 546 aa13.23□□□□□ -0.29
PHACTR1-210ENST00000489548 NUDT16Q96DE0 195 aaKnown RBP13.23□□□□□ -0.29
PHACTR1-210ENST00000489548 USP35Q9P2H5 1018 aa13.23□□□□□ -0.29
PHACTR1-210ENST00000489548 PARD3Q8TEW0 1356 aa13.22□□□□□ -0.29
PHACTR1-210ENST00000489548 EVA1CP58658 441 aa13.22□□□□□ -0.29
PHACTR1-210ENST00000489548 PDE3BQ13370 1112 aa13.22□□□□□ -0.29
PHACTR1-210ENST00000489548 NUTM2GQ5VZR2 741 aa13.22□□□□□ -0.29
PHACTR1-210ENST00000489548 BARGINQ6ZT62 677 aa13.22□□□□□ -0.29
PHACTR1-210ENST00000489548 MIER1Q8N108 512 aa13.22□□□□□ -0.29
PHACTR1-210ENST00000489548 STAC3Q96MF2 364 aa13.21□□□□□ -0.29
PHACTR1-210ENST00000489548 NBPF8Q3BBV2 869 aa13.2□□□□□ -0.3
PHACTR1-210ENST00000489548 NBPF14Q5TI25 921 aa13.2□□□□□ -0.3
PHACTR1-210ENST00000489548 ATP7BP35670 1465 aa13.19□□□□□ -0.3
PHACTR1-210ENST00000489548 LARP1Q6PKG0 1096 aaKnown RBP13.19□□□□□ -0.3
PHACTR1-210ENST00000489548 TCP11L2Q8N4U5 519 aa13.19□□□□□ -0.3
PHACTR1-210ENST00000489548 CDK19Q9BWU1 502 aa13.19□□□□□ -0.3
PHACTR1-210ENST00000489548 ACEP12821 1306 aa13.18□□□□□ -0.3
PHACTR1-210ENST00000489548 YY1P25490 414 aa13.18□□□□□ -0.3
PHACTR1-210ENST00000489548 SSH2Q76I76 1423 aa13.18□□□□□ -0.3
PHACTR1-210ENST00000489548 PLEKHG3A1L390 1219 aa13.17□□□□□ -0.3
PHACTR1-210ENST00000489548 ABTB2Q8N961 1025 aa13.17□□□□□ -0.3
PHACTR1-210ENST00000489548 CCDC61Q9Y6R9 512 aa13.17□□□□□ -0.3
PHACTR1-210ENST00000489548 POLR3AO14802 1390 aaPredicted RBP13.17□□□□□ -0.3
PHACTR1-210ENST00000489548 PHRF1Q9P1Y6 1649 aaKnown RBP13.17□□□□□ -0.3
PHACTR1-210ENST00000489548 CAMTA1Q9Y6Y1 1673 aa13.16□□□□□ -0.3
PHACTR1-210ENST00000489548 SPON1Q9HCB6 807 aa13.16□□□□□ -0.3
PHACTR1-210ENST00000489548 THRAP3Q9Y2W1 955 aaKnown RBP13.16□□□□□ -0.3
PHACTR1-210ENST00000489548 CPDO75976 1380 aa13.15□□□□□ -0.3
PHACTR1-210ENST00000489548 ITSN1Q15811 1721 aa13.14□□□□□ -0.31
PHACTR1-210ENST00000489548 C11orf95C9JLR9 678 aaPredicted RBP13.14□□□□□ -0.31
PHACTR1-210ENST00000489548 KCNQ2O43526 872 aa13.14□□□□□ -0.31
PHACTR1-210ENST00000489548 GCP02774 474 aa13.14□□□□□ -0.31
PHACTR1-210ENST00000489548 PPP1R1BQ9UD71 204 aaPredicted RBP13.14□□□□□ -0.31
PHACTR1-210ENST00000489548 RREB1Q92766 1687 aa13.14□□□□□ -0.31
PHACTR1-210ENST00000489548 USP19O94966 1318 aa13.13□□□□□ -0.31
PHACTR1-210ENST00000489548 NLRP13Q86W25 1043 aa13.13□□□□□ -0.31
PHACTR1-210ENST00000489548 NUP188Q5SRE5 1749 aa13.13□□□□□ -0.31
PHACTR1-210ENST00000489548 ARHGEF28Q8N1W1 1705 aaKnown RBP13.13□□□□□ -0.31
PHACTR1-210ENST00000489548 L3MBTL2Q969R5 705 aa13.12□□□□□ -0.31
PHACTR1-210ENST00000489548 NRKQ7Z2Y5 1582 aa13.11□□□□□ -0.31
PHACTR1-210ENST00000489548 DCAF8L1A6NGE4 600 aa13.11□□□□□ -0.31
PHACTR1-210ENST00000489548 PLSCR1O15162 318 aa13.11□□□□□ -0.31
PHACTR1-210ENST00000489548 EIF4G2P78344 907 aaKnown RBP eCLIP13.11□□□□□ -0.31
PHACTR1-210ENST00000489548 LMO7Q8WWI1 1683 aa13.11□□□□□ -0.31
PHACTR1-210ENST00000489548 COL5A2P05997 1499 aaPredicted RBP13.1□□□□□ -0.31
PHACTR1-210ENST00000489548 NINLQ9Y2I6 1382 aa13.09□□□□□ -0.31
PHACTR1-210ENST00000489548 CRB1P82279 1406 aa13.09□□□□□ -0.31
PHACTR1-210ENST00000489548 TOPAZ1Q8N9V7 1692 aa13.08□□□□□ -0.31
PHACTR1-210ENST00000489548 SRPK2P78362 688 aaKnown RBP13.08□□□□□ -0.32
PHACTR1-210ENST00000489548 DDB1Q16531 1140 aa13.08□□□□□ -0.32
PHACTR1-210ENST00000489548 ANO8Q9HCE9 1232 aaPredicted RBP13.08□□□□□ -0.32
PHACTR1-210ENST00000489548 PARP4Q9UKK3 1724 aaKnown RBP13.08□□□□□ -0.32
PHACTR1-210ENST00000489548 OVOS2A0A0G2JMS6 1433 aa13.07□□□□□ -0.32
PHACTR1-210ENST00000489548 OVOS2A0A0J9YW53 1432 aa13.07□□□□□ -0.32
PHACTR1-210ENST00000489548 OVOS2Q6IE36 1432 aa13.07□□□□□ -0.32
PHACTR1-210ENST00000489548 ZBTB7CA1YPR0 619 aa13.07□□□□□ -0.32
PHACTR1-210ENST00000489548 CCER2I3L3R5 266 aa13.07□□□□□ -0.32
PHACTR1-210ENST00000489548 NLRP6P59044 892 aa13.07□□□□□ -0.32
PHACTR1-210ENST00000489548 NBPF1Q3BBV0 1214 aa13.07□□□□□ -0.32
PHACTR1-210ENST00000489548 PTF1AQ7RTS3 328 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms