RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 RPGRIP1LQ68CZ1 1315 aa23.15■■□□□ 1.3
UFD1-209ENST00000489406 ZBTB7AO95365 584 aa23.15■■□□□ 1.3
UFD1-209ENST00000489406 SYT17Q9BSW7 474 aa23.15■■□□□ 1.3
UFD1-209ENST00000489406 NRXN1Q9ULB1 1477 aa23.15■■□□□ 1.3
UFD1-209ENST00000489406 MYOM1P52179 1685 aa23.14■■□□□ 1.29
UFD1-209ENST00000489406 FHDC1Q9C0D6 1143 aaPredicted RBP23.14■■□□□ 1.29
UFD1-209ENST00000489406 TECPR2O15040 1411 aa23.14■■□□□ 1.29
UFD1-209ENST00000489406 PTGER2P43116 358 aa23.12■■□□□ 1.29
UFD1-209ENST00000489406 PMFBP1Q8TBY8 1022 aa23.12■■□□□ 1.29
UFD1-209ENST00000489406 PRDM11Q9NQV5 511 aa23.12■■□□□ 1.29
UFD1-209ENST00000489406 ATF5Q9Y2D1 282 aaPredicted RBP23.12■■□□□ 1.29
UFD1-209ENST00000489406 ANO8Q9HCE9 1232 aaPredicted RBP23.11■■□□□ 1.29
UFD1-209ENST00000489406 STRN4Q9NRL3 753 aa23.11■■□□□ 1.29
UFD1-209ENST00000489406 USP35Q9P2H5 1018 aa23.11■■□□□ 1.29
UFD1-209ENST00000489406 CASZ1Q86V15 1759 aa23.1■■□□□ 1.29
UFD1-209ENST00000489406 LOC105371045A0A1W2PR82 267 aa23.1■■□□□ 1.29
UFD1-209ENST00000489406 TMEM132EQ6IEE7 984 aa23.1■■□□□ 1.29
UFD1-209ENST00000489406 ABCC11Q96J66 1382 aa23.09■■□□□ 1.29
UFD1-209ENST00000489406 PPLO60437 1756 aa23.08■■□□□ 1.29
UFD1-209ENST00000489406 IFT172Q9UG01 1749 aa23.06■■□□□ 1.28
UFD1-209ENST00000489406 ADGRF5Q8IZF2 1346 aa23.06■■□□□ 1.28
UFD1-209ENST00000489406 ITGAEP38570 1179 aa23.05■■□□□ 1.28
UFD1-209ENST00000489406 CHRNA2Q15822 529 aa23.05■■□□□ 1.28
UFD1-209ENST00000489406 BARGINQ6ZT62 677 aa23.03■■□□□ 1.28
UFD1-209ENST00000489406 KNDC1Q76NI1 1749 aa23.02■■□□□ 1.28
UFD1-209ENST00000489406 BCL11BQ9C0K0 894 aaPredicted RBP23.02■■□□□ 1.28
UFD1-209ENST00000489406 TRPM3Q9HCF6 1732 aaPredicted RBP23.02■■□□□ 1.28
UFD1-209ENST00000489406 KIAA0232Q92628 1395 aa23.01■■□□□ 1.27
UFD1-209ENST00000489406 ALS2Q96Q42 1657 aa23■■□□□ 1.27
UFD1-209ENST00000489406 PLSCR1O15162 318 aa22.99■■□□□ 1.27
UFD1-209ENST00000489406 DLC1Q96QB1 1528 aa22.98■■□□□ 1.27
UFD1-209ENST00000489406 EVA1CP58658 441 aa22.98■■□□□ 1.27
UFD1-209ENST00000489406 GPR162Q16538 588 aa22.98■■□□□ 1.27
UFD1-209ENST00000489406 GPRASP1Q5JY77 1395 aa22.98■■□□□ 1.27
UFD1-209ENST00000489406 YTHDC2Q9H6S0 1430 aaKnown RBP22.98■■□□□ 1.27
UFD1-209ENST00000489406 SAFB2Q14151 953 aaKnown RBP eCLIP22.97■■□□□ 1.27
UFD1-209ENST00000489406 PAK3O75914 559 aaPredicted RBP22.96■■□□□ 1.27
UFD1-209ENST00000489406 SIRT1Q96EB6 747 aa22.96■■□□□ 1.27
UFD1-209ENST00000489406 CRYBG1Q9Y4K1 1723 aa22.96■■□□□ 1.27
UFD1-209ENST00000489406 ACIN1Q9UKV3 1341 aaKnown RBP22.94■■□□□ 1.26
UFD1-209ENST00000489406 ZC3H6P61129 1189 aaKnown RBP22.94■■□□□ 1.26
UFD1-209ENST00000489406 PROM2Q8N271 834 aa22.94■■□□□ 1.26
UFD1-209ENST00000489406 TCP11L2Q8N4U5 519 aa22.94■■□□□ 1.26
UFD1-209ENST00000489406 SGIP1Q9BQI5 828 aa22.94■■□□□ 1.26
UFD1-209ENST00000489406 SSH2Q76I76 1423 aa22.93■■□□□ 1.26
UFD1-209ENST00000489406 LARP1Q6PKG0 1096 aaKnown RBP22.93■■□□□ 1.26
UFD1-209ENST00000489406 MTFR1LQ9H019 292 aa22.93■■□□□ 1.26
UFD1-209ENST00000489406 RGPD3A6NKT7 1758 aaPredicted RBP22.93■■□□□ 1.26
UFD1-209ENST00000489406 RGPD4Q7Z3J3 1758 aa22.93■■□□□ 1.26
UFD1-209ENST00000489406 PTF1AQ7RTS3 328 aa22.92■■□□□ 1.26
UFD1-209ENST00000489406 ARXQ96QS3 562 aa22.92■■□□□ 1.26
UFD1-209ENST00000489406 ANKARQ7Z5J8 1434 aa22.91■■□□□ 1.26
UFD1-209ENST00000489406 C11orf95C9JLR9 678 aaPredicted RBP22.91■■□□□ 1.26
UFD1-209ENST00000489406 STK32BQ9NY57 414 aa22.91■■□□□ 1.26
UFD1-209ENST00000489406 RGL3Q3MIN7 710 aa22.9■■□□□ 1.26
UFD1-209ENST00000489406 SHANK3Q9BYB0 1731 aa22.9■■□□□ 1.26
UFD1-209ENST00000489406 SLC15A2Q16348 729 aa22.89■■□□□ 1.25
UFD1-209ENST00000489406 PRAM1Q96QH2 718 aa22.89■■□□□ 1.25
UFD1-209ENST00000489406 PELP1Q8IZL8 1130 aaKnown RBP22.88■■□□□ 1.25
UFD1-209ENST00000489406 OVOS2A0A0G2JMS6 1433 aa22.88■■□□□ 1.25
UFD1-209ENST00000489406 OVOS2A0A0J9YW53 1432 aa22.88■■□□□ 1.25
UFD1-209ENST00000489406 OVOS2Q6IE36 1432 aa22.88■■□□□ 1.25
UFD1-209ENST00000489406 HSPA6P17066 643 aa22.86■■□□□ 1.25
UFD1-209ENST00000489406 NGDNQ8NEJ9 315 aaKnown RBP22.86■■□□□ 1.25
UFD1-209ENST00000489406 MAP3K5Q99683 1374 aa22.86■■□□□ 1.25
UFD1-209ENST00000489406 THRAP3Q9Y2W1 955 aaKnown RBP22.85■■□□□ 1.25
UFD1-209ENST00000489406 PEAK1Q9H792 1746 aa22.84■■□□□ 1.25
UFD1-209ENST00000489406 PIK3C2GO75747 1445 aa22.83■■□□□ 1.25
UFD1-209ENST00000489406 PARP4Q9UKK3 1724 aaKnown RBP22.83■■□□□ 1.25
UFD1-209ENST00000489406 SBF2Q86WG5 1849 aa22.83■■□□□ 1.25
UFD1-209ENST00000489406 TXNRD1Q16881 649 aa22.83■■□□□ 1.25
UFD1-209ENST00000489406 NUTM2GQ5VZR2 741 aa22.83■■□□□ 1.25
UFD1-209ENST00000489406 PRR36Q9H6K5 1346 aa22.82■■□□□ 1.24
UFD1-209ENST00000489406 DHX57Q6P158 1386 aaKnown RBP22.82■■□□□ 1.24
UFD1-209ENST00000489406 ANKRD30BQ9BXX2 1392 aa22.82■■□□□ 1.24
UFD1-209ENST00000489406 KLHL34Q8N239 644 aa22.82■■□□□ 1.24
UFD1-209ENST00000489406 POGKQ9P215 609 aa22.82■■□□□ 1.24
UFD1-209ENST00000489406 PHRF1Q9P1Y6 1649 aaKnown RBP22.82■■□□□ 1.24
UFD1-209ENST00000489406 HIRIP3Q9BW71 556 aaPredicted RBP22.81■■□□□ 1.24
UFD1-209ENST00000489406 GOLGB1Q14789 3259 aaKnown RBP22.78■■□□□ 1.24
UFD1-209ENST00000489406 SLC4A1APQ9BWU0 796 aaKnown RBP22.77■■□□□ 1.24
UFD1-209ENST00000489406 C14orf93Q9H972 538 aaKnown RBP22.77■■□□□ 1.24
UFD1-209ENST00000489406 DDB1Q16531 1140 aa22.76■■□□□ 1.23
UFD1-209ENST00000489406 ATP7BP35670 1465 aa22.76■■□□□ 1.23
UFD1-209ENST00000489406 CAPN15O75808 1086 aa22.75■■□□□ 1.23
UFD1-209ENST00000489406 CFAP70Q5T0N1 1121 aa22.75■■□□□ 1.23
UFD1-209ENST00000489406 ATP10DQ9P241 1426 aa22.74■■□□□ 1.23
UFD1-209ENST00000489406 SPATA31E1Q6ZUB1 1445 aa22.74■■□□□ 1.23
UFD1-209ENST00000489406 GPBP1L1Q9HC44 474 aaPredicted RBP22.73■■□□□ 1.23
UFD1-209ENST00000489406 MINK1Q8N4C8 1332 aaPredicted RBP22.73■■□□□ 1.23
UFD1-209ENST00000489406 EIF3AQ14152 1382 aaKnown RBP22.72■■□□□ 1.23
UFD1-209ENST00000489406 LMO7Q8WWI1 1683 aa22.71■■□□□ 1.23
UFD1-209ENST00000489406 MARCH10Q8NA82 808 aaPredicted RBP22.71■■□□□ 1.23
UFD1-209ENST00000489406 TULP4Q9NRJ4 1543 aa22.71■■□□□ 1.23
UFD1-209ENST00000489406 LRRC37A3O60309 1634 aa22.71■■□□□ 1.23
UFD1-209ENST00000489406 NLGN2Q8NFZ4 835 aa22.7■■□□□ 1.22
UFD1-209ENST00000489406 CRB1P82279 1406 aa22.69■■□□□ 1.22
UFD1-209ENST00000489406 WASLO00401 505 aaPredicted RBP22.69■■□□□ 1.22
UFD1-209ENST00000489406 COL5A2P05997 1499 aaPredicted RBP22.68■■□□□ 1.22
UFD1-209ENST00000489406 CPDO75976 1380 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms