RNA–Protein interactions for RNA: ENST00000488981.1

NF1-212, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 331 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-212ENST00000488981 ARMC2Q8NEN0 867 aa4.93□□□□□ -1.62
NF1-212ENST00000488981 PRR7Q8TB68 274 aa4.93□□□□□ -1.62
NF1-212ENST00000488981 GMPR2Q9P2T1 348 aaKnown RBP4.93□□□□□ -1.62
NF1-212ENST00000488981 LIMD1Q9UGP4 676 aa4.93□□□□□ -1.62
NF1-212ENST00000488981 PCDHB15Q9Y5E8 787 aa4.93□□□□□ -1.62
NF1-212ENST00000488981 TTC24A2A3L6 582 aaPredicted RBP4.92□□□□□ -1.62
NF1-212ENST00000488981 APBB1O00213 710 aa4.92□□□□□ -1.62
NF1-212ENST00000488981 ZBTB24O43167 697 aaPredicted RBP4.92□□□□□ -1.62
NF1-212ENST00000488981 KIFC2Q96AC6 838 aa4.92□□□□□ -1.62
NF1-212ENST00000488981 POLR3EQ9NVU0 708 aa4.92□□□□□ -1.62
NF1-212ENST00000488981 CCNYL3P0C7X3 344 aa4.91□□□□□ -1.62
NF1-212ENST00000488981 PNMA1Q8ND90 353 aa4.91□□□□□ -1.62
NF1-212ENST00000488981 GPKOWQ92917 476 aaPredicted RBP eCLIP4.91□□□□□ -1.62
NF1-212ENST00000488981 HLA-CQ95604 372 aa4.91□□□□□ -1.62
NF1-212ENST00000488981 FCF1Q9Y324 198 aaKnown RBP4.91□□□□□ -1.62
NF1-212ENST00000488981 WNT7BP56706 349 aa4.9□□□□□ -1.63
NF1-212ENST00000488981 GUCA2AQ02747 115 aa4.9□□□□□ -1.63
NF1-212ENST00000488981 KCNH2Q12809 1159 aa4.9□□□□□ -1.63
NF1-212ENST00000488981 QPCTQ16769 361 aa4.9□□□□□ -1.63
NF1-212ENST00000488981 NUDT12Q9BQG2 462 aa4.9□□□□□ -1.63
NF1-212ENST00000488981 ZC3H4Q9UPT8 1303 aaKnown RBP4.9□□□□□ -1.63
NF1-212ENST00000488981 CFAP99D6REC4 459 aa4.89□□□□□ -1.63
NF1-212ENST00000488981 WNT7AO00755 349 aa4.89□□□□□ -1.63
NF1-212ENST00000488981 TERTO14746 1132 aaKnown RBP4.89□□□□□ -1.63
NF1-212ENST00000488981 MPNDQ8N594 471 aa4.89□□□□□ -1.63
NF1-212ENST00000488981 PROCA1Q8NCQ7 364 aaPredicted RBP4.89□□□□□ -1.63
NF1-212ENST00000488981 SNIP1Q8TAD8 396 aaKnown RBP4.89□□□□□ -1.63
NF1-212ENST00000488981 SYMPKQ92797 1274 aaKnown RBP4.89□□□□□ -1.63
NF1-212ENST00000488981 TRIM47Q96LD4 638 aa4.89□□□□□ -1.63
NF1-212ENST00000488981 RFC5P40937 340 aa4.88□□□□□ -1.63
NF1-212ENST00000488981 RTL5Q5HYW3 569 aaPredicted RBP4.88□□□□□ -1.63
NF1-212ENST00000488981 SLC16A10Q8TF71 515 aa4.88□□□□□ -1.63
NF1-212ENST00000488981 ATP13A2Q9NQ11 1180 aa4.88□□□□□ -1.63
NF1-212ENST00000488981 DACH1Q9UI36 760 aa4.88□□□□□ -1.63
NF1-212ENST00000488981 GPSM3Q9Y4H4 160 aa4.88□□□□□ -1.63
NF1-212ENST00000488981 F12P00748 615 aaPredicted RBP4.87□□□□□ -1.63
NF1-212ENST00000488981 CABLES1Q8TDN4 633 aa4.87□□□□□ -1.63
NF1-212ENST00000488981 ZNF592Q92610 1267 aa4.87□□□□□ -1.63
NF1-212ENST00000488981 PRM3Q9NNZ6 103 aa4.87□□□□□ -1.63
NF1-212ENST00000488981 CSPP1Q1MSJ5 1256 aa4.86□□□□□ -1.63
NF1-212ENST00000488981 NBPF14Q5TI25 921 aa4.86□□□□□ -1.63
NF1-212ENST00000488981 NPAS3Q8IXF0 933 aa4.86□□□□□ -1.63
NF1-212ENST00000488981 ATP1B4Q9UN42 357 aaPredicted RBP4.86□□□□□ -1.63
NF1-212ENST00000488981 MCCD1P59942 119 aaPredicted RBP4.85□□□□□ -1.63
NF1-212ENST00000488981 FLIIQ13045 1269 aa4.85□□□□□ -1.63
NF1-212ENST00000488981 TRIM32Q13049 653 aa4.85□□□□□ -1.63
NF1-212ENST00000488981 CCDC125Q86Z20 511 aa4.85□□□□□ -1.63
NF1-212ENST00000488981 TRIM52Q96A61 297 aa4.85□□□□□ -1.63
NF1-212ENST00000488981 ARXQ96QS3 562 aa4.85□□□□□ -1.63
NF1-212ENST00000488981 PRDM9Q9NQV7 894 aa4.85□□□□□ -1.63
NF1-212ENST00000488981 AP1G2O75843 785 aa4.84□□□□□ -1.63
NF1-212ENST00000488981 SMPD1P17405 629 aa4.84□□□□□ -1.63
NF1-212ENST00000488981 CTDSPL2Q05D32 466 aa4.84□□□□□ -1.63
NF1-212ENST00000488981 PDXDC2PQ6P474 469 aa4.84□□□□□ -1.63
NF1-212ENST00000488981 UNC93B1Q9H1C4 597 aa4.84□□□□□ -1.63
NF1-212ENST00000488981 SNRPBP14678 240 aaKnown RBP4.83□□□□□ -1.64
NF1-212ENST00000488981 VARSP26640 1264 aaKnown RBP4.83□□□□□ -1.64
NF1-212ENST00000488981 BPHLQ86WA6 291 aaPredicted RBP4.83□□□□□ -1.64
NF1-212ENST00000488981 CCDC24Q8N4L8 307 aa4.83□□□□□ -1.64
NF1-212ENST00000488981 IRF7Q92985 503 aa4.83□□□□□ -1.64
NF1-212ENST00000488981 FKBPLQ9UIM3 349 aa4.83□□□□□ -1.64
NF1-212ENST00000488981 CDV3Q9UKY7 258 aaKnown RBP4.83□□□□□ -1.64
NF1-212ENST00000488981 USP17L8P0C7I0 530 aa4.82□□□□□ -1.64
NF1-212ENST00000488981 CTHP32929 405 aa4.82□□□□□ -1.64
NF1-212ENST00000488981 PTCRAQ6ISU1 281 aaPredicted RBP4.82□□□□□ -1.64
NF1-212ENST00000488981 ZNF511Q8NB15 262 aa4.82□□□□□ -1.64
NF1-212ENST00000488981 ZSCAN1Q8NBB4 408 aa4.82□□□□□ -1.64
NF1-212ENST00000488981 PER1O15534 1290 aaPredicted RBP4.81□□□□□ -1.64
NF1-212ENST00000488981 PTK2Q05397 1052 aa4.81□□□□□ -1.64
NF1-212ENST00000488981 TSC1Q92574 1164 aa4.81□□□□□ -1.64
NF1-212ENST00000488981 MRGPRX2Q96LB1 330 aa4.81□□□□□ -1.64
NF1-212ENST00000488981 NXF1Q9UBU9 619 aaKnown RBP4.81□□□□□ -1.64
NF1-212ENST00000488981 SH3BP2P78314 561 aa4.8□□□□□ -1.64
NF1-212ENST00000488981 RC3H1Q5TC82 1133 aaKnown RBP4.8□□□□□ -1.64
NF1-212ENST00000488981 SH3RF1Q7Z6J0 888 aa4.8□□□□□ -1.64
NF1-212ENST00000488981 TRMT44Q8IYL2 757 aaKnown RBP4.8□□□□□ -1.64
NF1-212ENST00000488981 FAM174AQ8TBP5 190 aa4.8□□□□□ -1.64
NF1-212ENST00000488981 CDK15Q96Q40 435 aa4.8□□□□□ -1.64
NF1-212ENST00000488981 LOC100996750A0A140TA64 210 aa4.79□□□□□ -1.64
NF1-212ENST00000488981 SIAH2O43255 324 aa4.79□□□□□ -1.64
NF1-212ENST00000488981 EIF5BO60841 1220 aaKnown RBP4.79□□□□□ -1.64
NF1-212ENST00000488981 FBXO31Q5XUX0 539 aaPredicted RBP4.79□□□□□ -1.64
NF1-212ENST00000488981 SH3BP5LQ7L8J4 393 aa4.79□□□□□ -1.64
NF1-212ENST00000488981 BAP1Q92560 729 aa4.79□□□□□ -1.64
NF1-212ENST00000488981 KRTAP4-6Q9BYQ5 205 aa4.79□□□□□ -1.64
NF1-212ENST00000488981 ZNF330Q9Y3S2 320 aaPredicted RBP4.79□□□□□ -1.64
NF1-212ENST00000488981 MAP4K5Q9Y4K4 846 aa4.79□□□□□ -1.64
NF1-212ENST00000488981 NDUFB9Q9Y6M9 179 aa4.79□□□□□ -1.64
NF1-212ENST00000488981 J3QL48 77 aa4.78□□□□□ -1.64
NF1-212ENST00000488981 SKOR1P84550 965 aa4.78□□□□□ -1.64
NF1-212ENST00000488981 LCE2CQ5TA81 110 aa4.78□□□□□ -1.64
NF1-212ENST00000488981 WWC1Q8IX03 1113 aa4.78□□□□□ -1.64
NF1-212ENST00000488981 LRRN4Q8WUT4 740 aa4.78□□□□□ -1.64
NF1-212ENST00000488981 HPS1Q92902 700 aa4.78□□□□□ -1.64
NF1-212ENST00000488981 GJD4Q96KN9 370 aaPredicted RBP4.78□□□□□ -1.64
NF1-212ENST00000488981 C1QTNF2Q9BXJ5 285 aa4.78□□□□□ -1.64
NF1-212ENST00000488981 TRIM34Q9BYJ4 488 aa4.78□□□□□ -1.64
NF1-212ENST00000488981 BCL11AQ9H165 835 aa4.78□□□□□ -1.64
NF1-212ENST00000488981 MAP10Q9P2G4 905 aa4.78□□□□□ -1.64
NF1-212ENST00000488981 NR5A1Q13285 461 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms