RNA–Protein interactions for RNA: ENST00000488836.3

RN7SL28P-201, Transcript of RNA, 7SL, cytoplasmic 28, pseudogene, humanhuman

BASIC

Gene RN7SL28P, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL28P-201ENST00000488836 DEFB132Q7Z7B7 95 aa12.52□□□□□ -0.41
RN7SL28P-201ENST00000488836 BTG4Q9NY30 223 aa12.52□□□□□ -0.41
RN7SL28P-201ENST00000488836 TRAK1Q9UPV9 953 aa12.52□□□□□ -0.41
RN7SL28P-201ENST00000488836 WASLO00401 505 aaPredicted RBP12.51□□□□□ -0.41
RN7SL28P-201ENST00000488836 NGDNQ8NEJ9 315 aaKnown RBP12.51□□□□□ -0.41
RN7SL28P-201ENST00000488836 ALS2Q96Q42 1657 aa12.51□□□□□ -0.41
RN7SL28P-201ENST00000488836 NRAPQ86VF7 1730 aa12.51□□□□□ -0.41
RN7SL28P-201ENST00000488836 FAM98CQ17RN3 349 aaKnown RBP12.5□□□□□ -0.41
RN7SL28P-201ENST00000488836 HIRIP3Q9BW71 556 aaPredicted RBP12.5□□□□□ -0.41
RN7SL28P-201ENST00000488836 MINK1Q8N4C8 1332 aaPredicted RBP12.5□□□□□ -0.41
RN7SL28P-201ENST00000488836 RAB3GAP2Q9H2M9 1393 aa12.5□□□□□ -0.41
RN7SL28P-201ENST00000488836 ITSN1Q15811 1721 aa12.5□□□□□ -0.41
RN7SL28P-201ENST00000488836 LRP5O75197 1615 aa12.49□□□□□ -0.41
RN7SL28P-201ENST00000488836 PAK3O75914 559 aaPredicted RBP12.49□□□□□ -0.41
RN7SL28P-201ENST00000488836 DCAF11Q8TEB1 546 aa12.49□□□□□ -0.41
RN7SL28P-201ENST00000488836 RGPD1P0DJD0 1748 aa12.48□□□□□ -0.41
RN7SL28P-201ENST00000488836 SPATA31A5Q5VU36 1347 aa12.48□□□□□ -0.41
RN7SL28P-201ENST00000488836 SPATA31A7Q8IWB4 1347 aa12.48□□□□□ -0.41
RN7SL28P-201ENST00000488836 PRDM11Q9NQV5 511 aa12.48□□□□□ -0.41
RN7SL28P-201ENST00000488836 PRR36Q9H6K5 1346 aa12.47□□□□□ -0.41
RN7SL28P-201ENST00000488836 KDM2AQ9Y2K7 1162 aa12.47□□□□□ -0.41
RN7SL28P-201ENST00000488836 ATP7BP35670 1465 aa12.46□□□□□ -0.41
RN7SL28P-201ENST00000488836 HRCP23327 699 aa12.45□□□□□ -0.42
RN7SL28P-201ENST00000488836 CRYBG1Q9Y4K1 1723 aa12.45□□□□□ -0.42
RN7SL28P-201ENST00000488836 DISP2A7MBM2 1401 aa12.45□□□□□ -0.42
RN7SL28P-201ENST00000488836 NUDT16Q96DE0 195 aaKnown RBP12.44□□□□□ -0.42
RN7SL28P-201ENST00000488836 ARHGEF28Q8N1W1 1705 aaKnown RBP12.44□□□□□ -0.42
RN7SL28P-201ENST00000488836 THSD7AQ9UPZ6 1657 aa12.44□□□□□ -0.42
RN7SL28P-201ENST00000488836 FAM196AQ6ZSG2 479 aa12.43□□□□□ -0.42
RN7SL28P-201ENST00000488836 PARD3Q8TEW0 1356 aa12.43□□□□□ -0.42
RN7SL28P-201ENST00000488836 KIAA0232Q92628 1395 aa12.43□□□□□ -0.42
RN7SL28P-201ENST00000488836 SPATA31A1Q5TZJ5 1347 aa12.42□□□□□ -0.42
RN7SL28P-201ENST00000488836 EN1Q05925 392 aaPredicted RBP12.42□□□□□ -0.42
RN7SL28P-201ENST00000488836 CCDC61Q9Y6R9 512 aa12.42□□□□□ -0.42
RN7SL28P-201ENST00000488836 PHRF1Q9P1Y6 1649 aaKnown RBP12.41□□□□□ -0.42
RN7SL28P-201ENST00000488836 PSDA5PKW4 1024 aaPredicted RBP12.41□□□□□ -0.42
RN7SL28P-201ENST00000488836 EVA1CP58658 441 aa12.41□□□□□ -0.42
RN7SL28P-201ENST00000488836 POLR3AO14802 1390 aaPredicted RBP12.41□□□□□ -0.42
RN7SL28P-201ENST00000488836 KIAA1210Q9ULL0 1709 aa12.4□□□□□ -0.42
RN7SL28P-201ENST00000488836 C11orf95C9JLR9 678 aaPredicted RBP12.4□□□□□ -0.42
RN7SL28P-201ENST00000488836 CDK19Q9BWU1 502 aa12.4□□□□□ -0.42
RN7SL28P-201ENST00000488836 STRN4Q9NRL3 753 aa12.4□□□□□ -0.42
RN7SL28P-201ENST00000488836 TNS1Q9HBL0 1735 aaKnown RBP12.4□□□□□ -0.43
RN7SL28P-201ENST00000488836 PLEKHG3A1L390 1219 aa12.39□□□□□ -0.43
RN7SL28P-201ENST00000488836 PDE3BQ13370 1112 aa12.39□□□□□ -0.43
RN7SL28P-201ENST00000488836 NBPF8Q3BBV2 869 aa12.39□□□□□ -0.43
RN7SL28P-201ENST00000488836 BARGINQ6ZT62 677 aa12.39□□□□□ -0.43
RN7SL28P-201ENST00000488836 ABTB2Q8N961 1025 aa12.39□□□□□ -0.43
RN7SL28P-201ENST00000488836 BRD4O60885 1362 aaPredicted RBP12.39□□□□□ -0.43
RN7SL28P-201ENST00000488836 TOPAZ1Q8N9V7 1692 aa12.38□□□□□ -0.43
RN7SL28P-201ENST00000488836 ACEP12821 1306 aa12.38□□□□□ -0.43
RN7SL28P-201ENST00000488836 ZC3H6P61129 1189 aaKnown RBP12.38□□□□□ -0.43
RN7SL28P-201ENST00000488836 R3HDM1Q15032 1099 aaKnown RBP12.38□□□□□ -0.43
RN7SL28P-201ENST00000488836 CHRNA2Q15822 529 aa12.38□□□□□ -0.43
RN7SL28P-201ENST00000488836 FAM182BQ5T319 152 aa12.38□□□□□ -0.43
RN7SL28P-201ENST00000488836 NLRP13Q86W25 1043 aa12.38□□□□□ -0.43
RN7SL28P-201ENST00000488836 THRAP3Q9Y2W1 955 aaKnown RBP12.38□□□□□ -0.43
RN7SL28P-201ENST00000488836 CPDO75976 1380 aa12.38□□□□□ -0.43
RN7SL28P-201ENST00000488836 SSH2Q76I76 1423 aa12.37□□□□□ -0.43
RN7SL28P-201ENST00000488836 TRIM37O94972 964 aa12.37□□□□□ -0.43
RN7SL28P-201ENST00000488836 RNF216Q9NWF9 866 aaPredicted RBP12.37□□□□□ -0.43
RN7SL28P-201ENST00000488836 USP35Q9P2H5 1018 aa12.37□□□□□ -0.43
RN7SL28P-201ENST00000488836 NRKQ7Z2Y5 1582 aa12.36□□□□□ -0.43
RN7SL28P-201ENST00000488836 APBA3O96018 575 aa12.36□□□□□ -0.43
RN7SL28P-201ENST00000488836 EZH2Q15910 746 aaKnown RBP12.36□□□□□ -0.43
RN7SL28P-201ENST00000488836 TCP11L2Q8N4U5 519 aa12.36□□□□□ -0.43
RN7SL28P-201ENST00000488836 CAMKK2Q96RR4 588 aa12.36□□□□□ -0.43
RN7SL28P-201ENST00000488836 SRPK2P78362 688 aaKnown RBP12.35□□□□□ -0.43
RN7SL28P-201ENST00000488836 NBPF14Q5TI25 921 aa12.35□□□□□ -0.43
RN7SL28P-201ENST00000488836 NUTM2GQ5VZR2 741 aa12.35□□□□□ -0.43
RN7SL28P-201ENST00000488836 USP19O94966 1318 aa12.35□□□□□ -0.43
RN7SL28P-201ENST00000488836 PPIP5K1Q6PFW1 1433 aa12.34□□□□□ -0.43
RN7SL28P-201ENST00000488836 LMO7Q8WWI1 1683 aa12.33□□□□□ -0.44
RN7SL28P-201ENST00000488836 CAMTA1Q9Y6Y1 1673 aa12.33□□□□□ -0.44
RN7SL28P-201ENST00000488836 GCP02774 474 aa12.33□□□□□ -0.44
RN7SL28P-201ENST00000488836 CENPJQ9HC77 1338 aaPredicted RBP12.33□□□□□ -0.44
RN7SL28P-201ENST00000488836 LARP1Q6PKG0 1096 aaKnown RBP12.32□□□□□ -0.44
RN7SL28P-201ENST00000488836 RREB1Q92766 1687 aa12.32□□□□□ -0.44
RN7SL28P-201ENST00000488836 PARP4Q9UKK3 1724 aaKnown RBP12.31□□□□□ -0.44
RN7SL28P-201ENST00000488836 CRB1P82279 1406 aa12.31□□□□□ -0.44
RN7SL28P-201ENST00000488836 COL5A2P05997 1499 aaPredicted RBP12.31□□□□□ -0.44
RN7SL28P-201ENST00000488836 AATKQ6ZMQ8 1374 aa12.3□□□□□ -0.44
RN7SL28P-201ENST00000488836 OVOS2A0A0G2JMS6 1433 aa12.29□□□□□ -0.44
RN7SL28P-201ENST00000488836 OVOS2A0A0J9YW53 1432 aa12.29□□□□□ -0.44
RN7SL28P-201ENST00000488836 OVOS2Q6IE36 1432 aa12.29□□□□□ -0.44
RN7SL28P-201ENST00000488836 DCAF8L1A6NGE4 600 aa12.29□□□□□ -0.44
RN7SL28P-201ENST00000488836 NLRP6P59044 892 aa12.29□□□□□ -0.44
RN7SL28P-201ENST00000488836 NBPF1Q3BBV0 1214 aa12.29□□□□□ -0.44
RN7SL28P-201ENST00000488836 CDCA7Q9BWT1 371 aaPredicted RBP12.29□□□□□ -0.44
RN7SL28P-201ENST00000488836 QRICH2Q9H0J4 1663 aa12.29□□□□□ -0.44
RN7SL28P-201ENST00000488836 USP6P35125 1406 aa12.28□□□□□ -0.44
RN7SL28P-201ENST00000488836 NUP188Q5SRE5 1749 aa12.28□□□□□ -0.44
RN7SL28P-201ENST00000488836 ZBTB22O15209 634 aa12.28□□□□□ -0.44
RN7SL28P-201ENST00000488836 CABP2Q9NPB3 220 aa12.28□□□□□ -0.44
RN7SL28P-201ENST00000488836 RGPD3A6NKT7 1758 aaPredicted RBP12.28□□□□□ -0.44
RN7SL28P-201ENST00000488836 RGPD4Q7Z3J3 1758 aa12.28□□□□□ -0.44
RN7SL28P-201ENST00000488836 DDB1Q16531 1140 aa12.27□□□□□ -0.45
RN7SL28P-201ENST00000488836 SPON1Q9HCB6 807 aa12.27□□□□□ -0.45
RN7SL28P-201ENST00000488836 CABP1Q9NZU7 370 aa12.27□□□□□ -0.45
RN7SL28P-201ENST00000488836 PPP1R1BQ9UD71 204 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms