RNA–Protein interactions for RNA: ENST00000488722.5

HP1BP3-213, Transcript of heterochromatin protein 1 binding protein 3, humanhuman

TSL 5

Gene HP1BP3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HP1BP3-213ENST00000488722 EVA1BQ9NVM1 165 aa13.12□□□□□ -0.31
HP1BP3-213ENST00000488722 FKBPLQ9UIM3 349 aa13.12□□□□□ -0.31
HP1BP3-213ENST00000488722 HDGFL1Q5TGJ6 251 aa13.1□□□□□ -0.31
HP1BP3-213ENST00000488722 KCNH2Q12809 1159 aa13.09□□□□□ -0.31
HP1BP3-213ENST00000488722 SLC6A16Q9GZN6 736 aa13.08□□□□□ -0.32
HP1BP3-213ENST00000488722 ALG2Q9H553 416 aa13.08□□□□□ -0.32
HP1BP3-213ENST00000488722 NKX2-3Q8TAU0 364 aa13.07□□□□□ -0.32
HP1BP3-213ENST00000488722 ZC3H4Q9UPT8 1303 aaKnown RBP13.07□□□□□ -0.32
HP1BP3-213ENST00000488722 FBXO45P0C2W1 286 aa13.05□□□□□ -0.32
HP1BP3-213ENST00000488722 NR1H3Q13133 447 aa13.05□□□□□ -0.32
HP1BP3-213ENST00000488722 ZBBXA8MT70 800 aa13.04□□□□□ -0.32
HP1BP3-213ENST00000488722 SOX11P35716 441 aa13.04□□□□□ -0.32
HP1BP3-213ENST00000488722 CCDC24Q8N4L8 307 aa13.03□□□□□ -0.32
HP1BP3-213ENST00000488722 S1PR4O95977 384 aa13.02□□□□□ -0.33
HP1BP3-213ENST00000488722 PTCRAQ6ISU1 281 aaPredicted RBP13.02□□□□□ -0.33
HP1BP3-213ENST00000488722 ARMC2Q8NEN0 867 aa13.02□□□□□ -0.33
HP1BP3-213ENST00000488722 RNF166Q96A37 237 aaPredicted RBP13.02□□□□□ -0.33
HP1BP3-213ENST00000488722 HCSTQ9UBK5 93 aa13.02□□□□□ -0.33
HP1BP3-213ENST00000488722 SPNS2Q8IVW8 549 aa13.01□□□□□ -0.33
HP1BP3-213ENST00000488722 PCDH10Q9P2E7 1040 aa13.01□□□□□ -0.33
HP1BP3-213ENST00000488722 EIF4G2P78344 907 aaKnown RBP eCLIP13□□□□□ -0.33
HP1BP3-213ENST00000488722 GPKOWQ92917 476 aaPredicted RBP eCLIP13□□□□□ -0.33
HP1BP3-213ENST00000488722 UNC93B1Q9H1C4 597 aa13□□□□□ -0.33
HP1BP3-213ENST00000488722 SEMA3FQ13275 785 aa12.99□□□□□ -0.33
HP1BP3-213ENST00000488722 PDXDC2PQ6P474 469 aa12.99□□□□□ -0.33
HP1BP3-213ENST00000488722 NBPF14Q5TI25 921 aa12.98□□□□□ -0.33
HP1BP3-213ENST00000488722 UCN2Q96RP3 112 aa12.98□□□□□ -0.33
HP1BP3-213ENST00000488722 OCSTAMPQ9BR26 566 aa12.98□□□□□ -0.33
HP1BP3-213ENST00000488722 GPSM3Q9Y4H4 160 aa12.98□□□□□ -0.33
HP1BP3-213ENST00000488722 ITGBL1O95965 494 aaPredicted RBP12.97□□□□□ -0.33
HP1BP3-213ENST00000488722 FCF1Q9Y324 198 aaKnown RBP12.97□□□□□ -0.33
HP1BP3-213ENST00000488722 KCNC4Q03721 635 aa12.96□□□□□ -0.33
HP1BP3-213ENST00000488722 PTK2Q05397 1052 aa12.96□□□□□ -0.33
HP1BP3-213ENST00000488722 PPP1R12CQ9BZL4 782 aa12.96□□□□□ -0.33
HP1BP3-213ENST00000488722 CFAP70Q5T0N1 1121 aa12.95□□□□□ -0.34
HP1BP3-213ENST00000488722 PALM3A6NDB9 673 aaPredicted RBP12.92□□□□□ -0.34
HP1BP3-213ENST00000488722 SH3BP5LQ7L8J4 393 aa12.92□□□□□ -0.34
HP1BP3-213ENST00000488722 PPEF1O14829 653 aaPredicted RBP12.91□□□□□ -0.34
HP1BP3-213ENST00000488722 ARHGAP9Q9BRR9 750 aa12.91□□□□□ -0.34
HP1BP3-213ENST00000488722 ADAM32Q8TC27 787 aa12.9□□□□□ -0.34
HP1BP3-213ENST00000488722 BAP1Q92560 729 aa12.9□□□□□ -0.34
HP1BP3-213ENST00000488722 TFIP11Q9UBB9 837 aaKnown RBP12.9□□□□□ -0.34
HP1BP3-213ENST00000488722 PPP1R15AO75807 674 aaPredicted RBP12.89□□□□□ -0.35
HP1BP3-213ENST00000488722 RFX1P22670 979 aa12.89□□□□□ -0.35
HP1BP3-213ENST00000488722 TBC1D9Q6ZT07 1266 aa12.89□□□□□ -0.35
HP1BP3-213ENST00000488722 SH3RF1Q7Z6J0 888 aa12.89□□□□□ -0.35
HP1BP3-213ENST00000488722 RNF223E7ERA6 249 aa12.88□□□□□ -0.35
HP1BP3-213ENST00000488722 LINC01559Q495D7 138 aa12.88□□□□□ -0.35
HP1BP3-213ENST00000488722 SRPK2P78362 688 aaKnown RBP12.87□□□□□ -0.35
HP1BP3-213ENST00000488722 PCDHB9Q9Y5E1 797 aa12.87□□□□□ -0.35
HP1BP3-213ENST00000488722 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.86□□□□□ -0.35
HP1BP3-213ENST00000488722 PIK3CDO00329 1044 aa12.86□□□□□ -0.35
HP1BP3-213ENST00000488722 LMOD1P29536 600 aaPredicted RBP12.86□□□□□ -0.35
HP1BP3-213ENST00000488722 ZNF511Q8NB15 262 aa12.86□□□□□ -0.35
HP1BP3-213ENST00000488722 FOXJ1Q92949 421 aa12.86□□□□□ -0.35
HP1BP3-213ENST00000488722 PBXIP1Q96AQ6 731 aa12.86□□□□□ -0.35
HP1BP3-213ENST00000488722 MAFBQ9Y5Q3 323 aaPredicted RBP12.86□□□□□ -0.35
HP1BP3-213ENST00000488722 ATP9BO43861 1147 aa12.85□□□□□ -0.35
HP1BP3-213ENST00000488722 ZBTB33Q86T24 672 aa12.85□□□□□ -0.35
HP1BP3-213ENST00000488722 ANKLE1Q8NAG6 615 aa12.85□□□□□ -0.35
HP1BP3-213ENST00000488722 CEP126Q9P2H0 1117 aa12.85□□□□□ -0.35
HP1BP3-213ENST00000488722 MCCD1P59942 119 aaPredicted RBP12.84□□□□□ -0.35
HP1BP3-213ENST00000488722 C4orf48Q5BLP8 95 aa12.84□□□□□ -0.35
HP1BP3-213ENST00000488722 PLA2G2CQ5R387 149 aa12.84□□□□□ -0.35
HP1BP3-213ENST00000488722 BPHLQ86WA6 291 aaPredicted RBP12.84□□□□□ -0.35
HP1BP3-213ENST00000488722 ZNF592Q92610 1267 aa12.84□□□□□ -0.35
HP1BP3-213ENST00000488722 CARD14Q9BXL6 1004 aa12.84□□□□□ -0.35
HP1BP3-213ENST00000488722 MAGEB6P1A0A0J9YX57 407 aa12.83□□□□□ -0.36
HP1BP3-213ENST00000488722 NFATC2IPQ8NCF5 419 aa12.83□□□□□ -0.36
HP1BP3-213ENST00000488722 GGCXP38435 758 aa12.82□□□□□ -0.36
HP1BP3-213ENST00000488722 PPP1R18Q6NYC8 613 aa12.82□□□□□ -0.36
HP1BP3-213ENST00000488722 FAM174AQ8TBP5 190 aa12.82□□□□□ -0.36
HP1BP3-213ENST00000488722 SH3BP2P78314 561 aa12.81□□□□□ -0.36
HP1BP3-213ENST00000488722 AGERQ15109 404 aa12.81□□□□□ -0.36
HP1BP3-213ENST00000488722 ERFEQ4G0M1 354 aa12.81□□□□□ -0.36
HP1BP3-213ENST00000488722 PHTF2Q8N3S3 785 aa12.81□□□□□ -0.36
HP1BP3-213ENST00000488722 RETREG2Q8NC44 543 aa12.81□□□□□ -0.36
HP1BP3-213ENST00000488722 MMRN1Q13201 1228 aa12.8□□□□□ -0.36
HP1BP3-213ENST00000488722 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.8□□□□□ -0.36
HP1BP3-213ENST00000488722 ZBTB24O43167 697 aaPredicted RBP12.79□□□□□ -0.36
HP1BP3-213ENST00000488722 SKIP12755 728 aa12.79□□□□□ -0.36
HP1BP3-213ENST00000488722 TRIM32Q13049 653 aa12.79□□□□□ -0.36
HP1BP3-213ENST00000488722 DZIP3Q86Y13 1208 aaKnown RBP12.79□□□□□ -0.36
HP1BP3-213ENST00000488722 ACIN1Q9UKV3 1341 aaKnown RBP12.79□□□□□ -0.36
HP1BP3-213ENST00000488722 PDIA4P13667 645 aaKnown RBP12.78□□□□□ -0.36
HP1BP3-213ENST00000488722 SLFNL1Q499Z3 407 aa12.78□□□□□ -0.36
HP1BP3-213ENST00000488722 C1QTNF2Q9BXJ5 285 aa12.78□□□□□ -0.36
HP1BP3-213ENST00000488722 USP17L5A8MUK1 530 aa12.76□□□□□ -0.37
HP1BP3-213ENST00000488722 CDCA8Q53HL2 280 aa12.76□□□□□ -0.37
HP1BP3-213ENST00000488722 RNF135Q8IUD6 432 aa12.76□□□□□ -0.37
HP1BP3-213ENST00000488722 USP17L3A6NCW0 530 aa12.75□□□□□ -0.37
HP1BP3-213ENST00000488722 USP17L4A6NCW7 530 aa12.75□□□□□ -0.37
HP1BP3-213ENST00000488722 SKOR1P84550 965 aa12.75□□□□□ -0.37
HP1BP3-213ENST00000488722 USP17L2Q6R6M4 530 aa12.75□□□□□ -0.37
HP1BP3-213ENST00000488722 USP17L1Q7RTZ2 530 aa12.75□□□□□ -0.37
HP1BP3-213ENST00000488722 PLEKHM2Q8IWE5 1019 aa12.75□□□□□ -0.37
HP1BP3-213ENST00000488722 CHIC2Q9UKJ5 165 aa12.75□□□□□ -0.37
HP1BP3-213ENST00000488722 KANK4Q5T7N3 995 aaPredicted RBP12.74□□□□□ -0.37
HP1BP3-213ENST00000488722 SLC10A4Q96EP9 437 aa12.74□□□□□ -0.37
HP1BP3-213ENST00000488722 TRAIPQ9BWF2 469 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms