RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 RFC5P40937 340 aa9.15□□□□□ -0.94
ITGB1-214ENST00000488427 CTC1Q2NKJ3 1217 aa9.15□□□□□ -0.94
ITGB1-214ENST00000488427 TREML4Q6UXN2 200 aa9.15□□□□□ -0.94
ITGB1-214ENST00000488427 BANK1Q8NDB2 785 aa9.15□□□□□ -0.94
ITGB1-214ENST00000488427 PRM3Q9NNZ6 103 aa9.14□□□□□ -0.95
ITGB1-214ENST00000488427 TTC24A2A3L6 582 aaPredicted RBP9.13□□□□□ -0.95
ITGB1-214ENST00000488427 AP1G2O75843 785 aa9.13□□□□□ -0.95
ITGB1-214ENST00000488427 CCNYL3P0C7X3 344 aa9.13□□□□□ -0.95
ITGB1-214ENST00000488427 RTL5Q5HYW3 569 aaPredicted RBP9.13□□□□□ -0.95
ITGB1-214ENST00000488427 NUDT12Q9BQG2 462 aa9.13□□□□□ -0.95
ITGB1-214ENST00000488427 DACH1Q9UI36 760 aa9.13□□□□□ -0.95
ITGB1-214ENST00000488427 CFAP99D6REC4 459 aa9.12□□□□□ -0.95
ITGB1-214ENST00000488427 LYPD8Q6UX82 237 aa9.12□□□□□ -0.95
ITGB1-214ENST00000488427 C11orf95C9JLR9 678 aaPredicted RBP9.11□□□□□ -0.95
ITGB1-214ENST00000488427 SOCS7O14512 581 aa9.11□□□□□ -0.95
ITGB1-214ENST00000488427 SMCPP49901 116 aaPredicted RBP9.11□□□□□ -0.95
ITGB1-214ENST00000488427 ARMC2Q8NEN0 867 aa9.11□□□□□ -0.95
ITGB1-214ENST00000488427 GMPR2Q9P2T1 348 aaKnown RBP9.11□□□□□ -0.95
ITGB1-214ENST00000488427 CCDC24Q8N4L8 307 aa9.1□□□□□ -0.95
ITGB1-214ENST00000488427 WNT7AO00755 349 aa9.09□□□□□ -0.95
ITGB1-214ENST00000488427 FLIIQ13045 1269 aa9.09□□□□□ -0.95
ITGB1-214ENST00000488427 LCE2AQ5TA79 106 aaPredicted RBP9.09□□□□□ -0.95
ITGB1-214ENST00000488427 USP17L8P0C7I0 530 aa9.08□□□□□ -0.96
ITGB1-214ENST00000488427 CTHP32929 405 aa9.08□□□□□ -0.96
ITGB1-214ENST00000488427 TRIM32Q13049 653 aa9.08□□□□□ -0.96
ITGB1-214ENST00000488427 SNIP1Q8TAD8 396 aaKnown RBP9.08□□□□□ -0.96
ITGB1-214ENST00000488427 WFS1O76024 890 aa9.07□□□□□ -0.96
ITGB1-214ENST00000488427 EVA1BQ9NVM1 165 aa9.07□□□□□ -0.96
ITGB1-214ENST00000488427 KCNH2Q12809 1159 aa9.06□□□□□ -0.96
ITGB1-214ENST00000488427 CTDSPL2Q05D32 466 aa9.05□□□□□ -0.96
ITGB1-214ENST00000488427 NBPF14Q5TI25 921 aa9.05□□□□□ -0.96
ITGB1-214ENST00000488427 ZC3H4Q9UPT8 1303 aaKnown RBP9.05□□□□□ -0.96
ITGB1-214ENST00000488427 SMPD1P17405 629 aa9.04□□□□□ -0.96
ITGB1-214ENST00000488427 GPKOWQ92917 476 aaPredicted RBP eCLIP9.04□□□□□ -0.96
ITGB1-214ENST00000488427 MRGPRX2Q96LB1 330 aa9.04□□□□□ -0.96
ITGB1-214ENST00000488427 WWC1Q8IX03 1113 aa9.02□□□□□ -0.97
ITGB1-214ENST00000488427 ATP13A2Q9NQ11 1180 aa9.02□□□□□ -0.97
ITGB1-214ENST00000488427 J3QL48 77 aa9.01□□□□□ -0.97
ITGB1-214ENST00000488427 PER1O15534 1290 aaPredicted RBP9.01□□□□□ -0.97
ITGB1-214ENST00000488427 F12P00748 615 aaPredicted RBP9.01□□□□□ -0.97
ITGB1-214ENST00000488427 WNT7BP56706 349 aa9.01□□□□□ -0.97
ITGB1-214ENST00000488427 ERICH6Q7L0X2 663 aa9.01□□□□□ -0.97
ITGB1-214ENST00000488427 UNC93B1Q9H1C4 597 aa9.01□□□□□ -0.97
ITGB1-214ENST00000488427 SENP2Q9HC62 589 aa9.01□□□□□ -0.97
ITGB1-214ENST00000488427 NFX1Q12986 1120 aaKnown RBP9□□□□□ -0.97
ITGB1-214ENST00000488427 ZNF592Q92610 1267 aa9□□□□□ -0.97
ITGB1-214ENST00000488427 NDUFB9Q9Y6M9 179 aa9□□□□□ -0.97
ITGB1-214ENST00000488427 RAD21O60216 631 aa8.99□□□□□ -0.97
ITGB1-214ENST00000488427 LRRN4Q8WUT4 740 aa8.99□□□□□ -0.97
ITGB1-214ENST00000488427 MAP10Q9P2G4 905 aa8.98□□□□□ -0.97
ITGB1-214ENST00000488427 INSM1Q01101 510 aaPredicted RBP8.97□□□□□ -0.97
ITGB1-214ENST00000488427 MCM6Q14566 821 aa8.97□□□□□ -0.97
ITGB1-214ENST00000488427 RC3H1Q5TC82 1133 aaKnown RBP8.97□□□□□ -0.97
ITGB1-214ENST00000488427 FBXO31Q5XUX0 539 aaPredicted RBP8.97□□□□□ -0.97
ITGB1-214ENST00000488427 TRIM47Q96LD4 638 aa8.97□□□□□ -0.97
ITGB1-214ENST00000488427 FKBPLQ9UIM3 349 aa8.97□□□□□ -0.97
ITGB1-214ENST00000488427 WIPF1O43516 503 aa8.96□□□□□ -0.98
ITGB1-214ENST00000488427 SNRPBP14678 240 aaKnown RBP8.96□□□□□ -0.98
ITGB1-214ENST00000488427 NR6A1Q15406 480 aa8.96□□□□□ -0.98
ITGB1-214ENST00000488427 BPHLQ86WA6 291 aaPredicted RBP8.96□□□□□ -0.98
ITGB1-214ENST00000488427 HPS1Q92902 700 aa8.96□□□□□ -0.98
ITGB1-214ENST00000488427 KIFC2Q96AC6 838 aa8.96□□□□□ -0.98
ITGB1-214ENST00000488427 STK17AQ9UEE5 414 aa8.96□□□□□ -0.98
ITGB1-214ENST00000488427 ZNF330Q9Y3S2 320 aaPredicted RBP8.96□□□□□ -0.98
ITGB1-214ENST00000488427 GPSM3Q9Y4H4 160 aa8.96□□□□□ -0.98
ITGB1-214ENST00000488427 GTF3C3Q9Y5Q9 886 aa8.96□□□□□ -0.98
ITGB1-214ENST00000488427 UBTFP17480 764 aaKnown RBP8.95□□□□□ -0.98
ITGB1-214ENST00000488427 PTK2Q05397 1052 aa8.95□□□□□ -0.98
ITGB1-214ENST00000488427 AGERQ15109 404 aa8.95□□□□□ -0.98
ITGB1-214ENST00000488427 TERTO14746 1132 aaKnown RBP8.94□□□□□ -0.98
ITGB1-214ENST00000488427 SKOR1P84550 965 aa8.94□□□□□ -0.98
ITGB1-214ENST00000488427 PDXDC2PQ6P474 469 aa8.94□□□□□ -0.98
ITGB1-214ENST00000488427 ZNF511Q8NB15 262 aa8.94□□□□□ -0.98
ITGB1-214ENST00000488427 MTMR14Q8NCE2 650 aa8.94□□□□□ -0.98
ITGB1-214ENST00000488427 PTCRAQ6ISU1 281 aaPredicted RBP8.93□□□□□ -0.98
ITGB1-214ENST00000488427 HMX1Q9NP08 348 aaPredicted RBP8.93□□□□□ -0.98
ITGB1-214ENST00000488427 SNRKQ9NRH2 765 aa8.93□□□□□ -0.98
ITGB1-214ENST00000488427 ALDH1A1P00352 501 aa8.92□□□□□ -0.98
ITGB1-214ENST00000488427 EHBP1Q8NDI1 1231 aa8.92□□□□□ -0.98
ITGB1-214ENST00000488427 BAP1Q92560 729 aa8.92□□□□□ -0.98
ITGB1-214ENST00000488427 VARSP26640 1264 aaKnown RBP8.91□□□□□ -0.98
ITGB1-214ENST00000488427 FAM174AQ8TBP5 190 aa8.91□□□□□ -0.98
ITGB1-214ENST00000488427 TRIM52Q96A61 297 aa8.91□□□□□ -0.98
ITGB1-214ENST00000488427 GJD4Q96KN9 370 aaPredicted RBP8.91□□□□□ -0.98
ITGB1-214ENST00000488427 LINC01559Q495D7 138 aa8.9□□□□□ -0.98
ITGB1-214ENST00000488427 ZBTB33Q86T24 672 aa8.9□□□□□ -0.98
ITGB1-214ENST00000488427 ARHGAP9Q9BRR9 750 aa8.9□□□□□ -0.98
ITGB1-214ENST00000488427 TRIM34Q9BYJ4 488 aa8.9□□□□□ -0.98
ITGB1-214ENST00000488427 CDV3Q9UKY7 258 aaKnown RBP8.9□□□□□ -0.98
ITGB1-214ENST00000488427 MCCD1P59942 119 aaPredicted RBP8.89□□□□□ -0.99
ITGB1-214ENST00000488427 SH3BP2P78314 561 aa8.89□□□□□ -0.99
ITGB1-214ENST00000488427 WASHC4Q2M389 1173 aa8.89□□□□□ -0.99
ITGB1-214ENST00000488427 ZBBXA8MT70 800 aa8.88□□□□□ -0.99
ITGB1-214ENST00000488427 SLC16A10Q8TF71 515 aa8.87□□□□□ -0.99
ITGB1-214ENST00000488427 WASF2Q9Y6W5 498 aa8.87□□□□□ -0.99
ITGB1-214ENST00000488427 MAGEB6P1A0A0J9YX57 407 aa8.86□□□□□ -0.99
ITGB1-214ENST00000488427 ABL2P42684 1182 aa8.86□□□□□ -0.99
ITGB1-214ENST00000488427 LCE2CQ5TA81 110 aa8.86□□□□□ -0.99
ITGB1-214ENST00000488427 SH3BP5LQ7L8J4 393 aa8.86□□□□□ -0.99
ITGB1-214ENST00000488427 SLC10A4Q96EP9 437 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms