RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 VGFO15240 615 aaPredicted RBP16.94■□□□□ 0.3
HLA-DOB-209ENST00000488325 EIF4G2P78344 907 aaKnown RBP eCLIP16.94■□□□□ 0.3
HLA-DOB-209ENST00000488325 BTG4Q9NY30 223 aa16.94■□□□□ 0.3
HLA-DOB-209ENST00000488325 THSD7AQ9UPZ6 1657 aa16.94■□□□□ 0.3
HLA-DOB-209ENST00000488325 LMOD2Q6P5Q4 547 aa16.92■□□□□ 0.3
HLA-DOB-209ENST00000488325 FAM196AQ6ZSG2 479 aa16.92■□□□□ 0.3
HLA-DOB-209ENST00000488325 CEP350Q5VT06 3117 aa16.92■□□□□ 0.3
HLA-DOB-209ENST00000488325 SPATA31A5Q5VU36 1347 aa16.92■□□□□ 0.3
HLA-DOB-209ENST00000488325 RPGRIP1LQ68CZ1 1315 aa16.92■□□□□ 0.3
HLA-DOB-209ENST00000488325 SPATA31A7Q8IWB4 1347 aa16.92■□□□□ 0.3
HLA-DOB-209ENST00000488325 PSME1Q06323 249 aa16.91■□□□□ 0.3
HLA-DOB-209ENST00000488325 UTRNP46939 3433 aa16.91■□□□□ 0.3
HLA-DOB-209ENST00000488325 ARHGEF10O15013 1369 aa16.9■□□□□ 0.3
HLA-DOB-209ENST00000488325 WAPLQ7Z5K2 1190 aa16.9■□□□□ 0.3
HLA-DOB-209ENST00000488325 FMN2Q9NZ56 1722 aa16.9■□□□□ 0.3
HLA-DOB-209ENST00000488325 SBNO1A3KN83 1393 aa16.89■□□□□ 0.3
HLA-DOB-209ENST00000488325 ROCK2O75116 1388 aaKnown RBP16.89■□□□□ 0.29
HLA-DOB-209ENST00000488325 HSPA5P11021 654 aaKnown RBP16.88■□□□□ 0.29
HLA-DOB-209ENST00000488325 TRPM1Q7Z4N2 1603 aa16.88■□□□□ 0.29
HLA-DOB-209ENST00000488325 DIEXFQ68CQ4 756 aaKnown RBP16.87■□□□□ 0.29
HLA-DOB-209ENST00000488325 CARD11Q9BXL7 1154 aa16.87■□□□□ 0.29
HLA-DOB-209ENST00000488325 PHF8Q9UPP1 1060 aa16.87■□□□□ 0.29
HLA-DOB-209ENST00000488325 COL14A1Q05707 1796 aaKnown RBP16.87■□□□□ 0.29
HLA-DOB-209ENST00000488325 GPRASP1Q5JY77 1395 aa16.86■□□□□ 0.29
HLA-DOB-209ENST00000488325 NRKQ7Z2Y5 1582 aa16.85■□□□□ 0.29
HLA-DOB-209ENST00000488325 IFT172Q9UG01 1749 aa16.85■□□□□ 0.29
HLA-DOB-209ENST00000488325 STK26Q9P289 416 aa16.85■□□□□ 0.29
HLA-DOB-209ENST00000488325 USP47Q96K76 1375 aa16.85■□□□□ 0.29
HLA-DOB-209ENST00000488325 PLEKHH1Q9ULM0 1364 aa16.85■□□□□ 0.29
HLA-DOB-209ENST00000488325 TECPR2O15040 1411 aa16.85■□□□□ 0.29
HLA-DOB-209ENST00000488325 CHD4Q14839 1912 aa16.82■□□□□ 0.28
HLA-DOB-209ENST00000488325 PPLO60437 1756 aa16.82■□□□□ 0.28
HLA-DOB-209ENST00000488325 KIAA1210Q9ULL0 1709 aa16.82■□□□□ 0.28
HLA-DOB-209ENST00000488325 NRXN1Q9ULB1 1477 aa16.82■□□□□ 0.28
HLA-DOB-209ENST00000488325 SPATA31A1Q5TZJ5 1347 aa16.82■□□□□ 0.28
HLA-DOB-209ENST00000488325 RGPD8O14715 1765 aaPredicted RBP16.82■□□□□ 0.28
HLA-DOB-209ENST00000488325 HIRIP3Q9BW71 556 aaPredicted RBP16.8■□□□□ 0.28
HLA-DOB-209ENST00000488325 MYOM1P52179 1685 aa16.8■□□□□ 0.28
HLA-DOB-209ENST00000488325 GIGYF1O75420 1035 aaPredicted RBP16.79■□□□□ 0.28
HLA-DOB-209ENST00000488325 ABCC11Q96J66 1382 aa16.78■□□□□ 0.28
HLA-DOB-209ENST00000488325 ADGRF5Q8IZF2 1346 aa16.78■□□□□ 0.28
HLA-DOB-209ENST00000488325 CASZ1Q86V15 1759 aa16.78■□□□□ 0.28
HLA-DOB-209ENST00000488325 PDE3BQ13370 1112 aa16.77■□□□□ 0.28
HLA-DOB-209ENST00000488325 NBPF1Q3BBV0 1214 aa16.77■□□□□ 0.28
HLA-DOB-209ENST00000488325 PDGFDQ9GZP0 370 aaPredicted RBP16.77■□□□□ 0.28
HLA-DOB-209ENST00000488325 PIK3C2GO75747 1445 aa16.77■□□□□ 0.27
HLA-DOB-209ENST00000488325 KNDC1Q76NI1 1749 aa16.76■□□□□ 0.27
HLA-DOB-209ENST00000488325 ZBTB7AO95365 584 aa16.76■□□□□ 0.27
HLA-DOB-209ENST00000488325 PTGER2P43116 358 aa16.76■□□□□ 0.27
HLA-DOB-209ENST00000488325 SYT17Q9BSW7 474 aa16.76■□□□□ 0.27
HLA-DOB-209ENST00000488325 ANO8Q9HCE9 1232 aaPredicted RBP16.76■□□□□ 0.27
HLA-DOB-209ENST00000488325 PRDM11Q9NQV5 511 aa16.76■□□□□ 0.27
HLA-DOB-209ENST00000488325 PMFBP1Q8TBY8 1022 aa16.75■□□□□ 0.27
HLA-DOB-209ENST00000488325 FHDC1Q9C0D6 1143 aaPredicted RBP16.75■□□□□ 0.27
HLA-DOB-209ENST00000488325 TRPM3Q9HCF6 1732 aaPredicted RBP16.74■□□□□ 0.27
HLA-DOB-209ENST00000488325 TMEM132EQ6IEE7 984 aa16.74■□□□□ 0.27
HLA-DOB-209ENST00000488325 EIF3AQ14152 1382 aaKnown RBP16.74■□□□□ 0.27
HLA-DOB-209ENST00000488325 ALS2Q96Q42 1657 aa16.73■□□□□ 0.27
HLA-DOB-209ENST00000488325 CFAP70Q5T0N1 1121 aa16.73■□□□□ 0.27
HLA-DOB-209ENST00000488325 C14orf93Q9H972 538 aaKnown RBP16.73■□□□□ 0.27
HLA-DOB-209ENST00000488325 STRN4Q9NRL3 753 aa16.73■□□□□ 0.27
HLA-DOB-209ENST00000488325 USP35Q9P2H5 1018 aa16.73■□□□□ 0.27
HLA-DOB-209ENST00000488325 ATF5Q9Y2D1 282 aaPredicted RBP16.73■□□□□ 0.27
HLA-DOB-209ENST00000488325 CRYBG1Q9Y4K1 1723 aa16.71■□□□□ 0.27
HLA-DOB-209ENST00000488325 ST20-MTHFSA0A0A6YYL1 179 aa16.71■□□□□ 0.27
HLA-DOB-209ENST00000488325 BARGINQ6ZT62 677 aa16.71■□□□□ 0.27
HLA-DOB-209ENST00000488325 CCDC7Q96M83 1385 aa16.71■□□□□ 0.27
HLA-DOB-209ENST00000488325 DDX10Q13206 875 aaKnown RBP16.7■□□□□ 0.26
HLA-DOB-209ENST00000488325 CHRNA2Q15822 529 aa16.7■□□□□ 0.26
HLA-DOB-209ENST00000488325 YTHDC2Q9H6S0 1430 aaKnown RBP16.7■□□□□ 0.26
HLA-DOB-209ENST00000488325 WASHC2AQ641Q2 1341 aa16.7■□□□□ 0.26
HLA-DOB-209ENST00000488325 KIAA0232Q92628 1395 aa16.69■□□□□ 0.26
HLA-DOB-209ENST00000488325 SLC24A1O60721 1099 aa16.69■□□□□ 0.26
HLA-DOB-209ENST00000488325 DLC1Q96QB1 1528 aa16.69■□□□□ 0.26
HLA-DOB-209ENST00000488325 RGPD3A6NKT7 1758 aaPredicted RBP16.68■□□□□ 0.26
HLA-DOB-209ENST00000488325 RGPD4Q7Z3J3 1758 aa16.68■□□□□ 0.26
HLA-DOB-209ENST00000488325 PLSCR1O15162 318 aa16.67■□□□□ 0.26
HLA-DOB-209ENST00000488325 SIRT1Q96EB6 747 aa16.67■□□□□ 0.26
HLA-DOB-209ENST00000488325 BCL11BQ9C0K0 894 aaPredicted RBP16.67■□□□□ 0.26
HLA-DOB-209ENST00000488325 ANKARQ7Z5J8 1434 aa16.67■□□□□ 0.26
HLA-DOB-209ENST00000488325 KIF7Q2M1P5 1343 aa16.66■□□□□ 0.26
HLA-DOB-209ENST00000488325 ADGRB1O14514 1584 aa16.65■□□□□ 0.26
HLA-DOB-209ENST00000488325 SSH2Q76I76 1423 aa16.65■□□□□ 0.26
HLA-DOB-209ENST00000488325 C11orf95C9JLR9 678 aaPredicted RBP16.64■□□□□ 0.25
HLA-DOB-209ENST00000488325 EVA1CP58658 441 aa16.64■□□□□ 0.25
HLA-DOB-209ENST00000488325 TMF1P82094 1093 aa16.64■□□□□ 0.25
HLA-DOB-209ENST00000488325 SAFB2Q14151 953 aaKnown RBP eCLIP16.64■□□□□ 0.25
HLA-DOB-209ENST00000488325 TCP11L2Q8N4U5 519 aa16.64■□□□□ 0.25
HLA-DOB-209ENST00000488325 SGIP1Q9BQI5 828 aa16.64■□□□□ 0.25
HLA-DOB-209ENST00000488325 GPR162Q16538 588 aa16.63■□□□□ 0.25
HLA-DOB-209ENST00000488325 MTFR1LQ9H019 292 aa16.63■□□□□ 0.25
HLA-DOB-209ENST00000488325 SHANK3Q9BYB0 1731 aa16.62■□□□□ 0.25
HLA-DOB-209ENST00000488325 PAK3O75914 559 aaPredicted RBP16.62■□□□□ 0.25
HLA-DOB-209ENST00000488325 ZC3H6P61129 1189 aaKnown RBP16.62■□□□□ 0.25
HLA-DOB-209ENST00000488325 LARP1Q6PKG0 1096 aaKnown RBP16.62■□□□□ 0.25
HLA-DOB-209ENST00000488325 PROM2Q8N271 834 aa16.62■□□□□ 0.25
HLA-DOB-209ENST00000488325 TESK2Q96S53 571 aa16.62■□□□□ 0.25
HLA-DOB-209ENST00000488325 OVOS2A0A0G2JMS6 1433 aa16.62■□□□□ 0.25
HLA-DOB-209ENST00000488325 OVOS2A0A0J9YW53 1432 aa16.62■□□□□ 0.25
HLA-DOB-209ENST00000488325 OVOS2Q6IE36 1432 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms