RNA–Protein interactions for RNA: ENST00000486964.5

POLR1A-208, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5

Gene POLR1A, Length 1,427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-208ENST00000486964 NWD1Q149M9 1564 aa12.76□□□□□ -0.37
POLR1A-208ENST00000486964 CDC42BPGQ6DT37 1551 aa12.76□□□□□ -0.37
POLR1A-208ENST00000486964 EDC4Q6P2E9 1401 aaKnown RBP12.75□□□□□ -0.37
POLR1A-208ENST00000486964 SSH2Q76I76 1423 aa12.75□□□□□ -0.37
POLR1A-208ENST00000486964 NPM3O75607 178 aaKnown RBP12.75□□□□□ -0.37
POLR1A-208ENST00000486964 ERICH6Q7L0X2 663 aa12.75□□□□□ -0.37
POLR1A-208ENST00000486964 NUDCQ9Y266 331 aa12.74□□□□□ -0.37
POLR1A-208ENST00000486964 ACEP12821 1306 aa12.73□□□□□ -0.37
POLR1A-208ENST00000486964 GGNBP2Q9H3C7 697 aa12.73□□□□□ -0.37
POLR1A-208ENST00000486964 ADGRL3Q9HAR2 1447 aa12.73□□□□□ -0.37
POLR1A-208ENST00000486964 RNF123Q5XPI4 1314 aa12.73□□□□□ -0.37
POLR1A-208ENST00000486964 ZNF335Q9H4Z2 1342 aaPredicted RBP12.73□□□□□ -0.37
POLR1A-208ENST00000486964 TOPAZ1Q8N9V7 1692 aa12.72□□□□□ -0.37
POLR1A-208ENST00000486964 NCOA3Q9Y6Q9 1424 aa12.72□□□□□ -0.37
POLR1A-208ENST00000486964 MTHFSP49914 203 aa12.71□□□□□ -0.37
POLR1A-208ENST00000486964 ADAMTS8Q9UP79 889 aa12.71□□□□□ -0.37
POLR1A-208ENST00000486964 TTC21BQ7Z4L5 1316 aa12.71□□□□□ -0.38
POLR1A-208ENST00000486964 NKTRP30414 1462 aaKnown RBP12.71□□□□□ -0.38
POLR1A-208ENST00000486964 UBAP1LF5GYI3 381 aa12.71□□□□□ -0.38
POLR1A-208ENST00000486964 BLMP54132 1417 aaPredicted RBP12.7□□□□□ -0.38
POLR1A-208ENST00000486964 PNPLA6Q8IY17 1366 aa12.7□□□□□ -0.38
POLR1A-208ENST00000486964 USP6P35125 1406 aa12.7□□□□□ -0.38
POLR1A-208ENST00000486964 IRX6P78412 446 aaPredicted RBP12.7□□□□□ -0.38
POLR1A-208ENST00000486964 PROSER2Q86WR7 435 aaPredicted RBP12.7□□□□□ -0.38
POLR1A-208ENST00000486964 MED1Q15648 1581 aaPredicted RBP12.69□□□□□ -0.38
POLR1A-208ENST00000486964 NUTM2FA1L443 756 aa12.69□□□□□ -0.38
POLR1A-208ENST00000486964 NME9Q86XW9 330 aa12.69□□□□□ -0.38
POLR1A-208ENST00000486964 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.69□□□□□ -0.38
POLR1A-208ENST00000486964 RBM33Q96EV2 1170 aaKnown RBP12.69□□□□□ -0.38
POLR1A-208ENST00000486964 C19orf44Q9H6X5 657 aa12.69□□□□□ -0.38
POLR1A-208ENST00000486964 AATKQ6ZMQ8 1374 aa12.69□□□□□ -0.38
POLR1A-208ENST00000486964 ZRANB1Q9UGI0 708 aa12.68□□□□□ -0.38
POLR1A-208ENST00000486964 FMN2Q9NZ56 1722 aa12.68□□□□□ -0.38
POLR1A-208ENST00000486964 AKAP12Q02952 1782 aa12.67□□□□□ -0.38
POLR1A-208ENST00000486964 TTC21AQ8NDW8 1320 aa12.67□□□□□ -0.38
POLR1A-208ENST00000486964 MON2Q7Z3U7 1717 aa12.67□□□□□ -0.38
POLR1A-208ENST00000486964 TNNT2P45379 298 aaPredicted RBP12.67□□□□□ -0.38
POLR1A-208ENST00000486964 POLKQ9UBT6 870 aa12.67□□□□□ -0.38
POLR1A-208ENST00000486964 USP31Q70CQ4 1352 aa12.67□□□□□ -0.38
POLR1A-208ENST00000486964 PMFBP1Q8TBY8 1022 aa12.66□□□□□ -0.38
POLR1A-208ENST00000486964 PHF8Q9UPP1 1060 aa12.66□□□□□ -0.38
POLR1A-208ENST00000486964 NALCNQ8IZF0 1738 aa12.66□□□□□ -0.38
POLR1A-208ENST00000486964 WDR43Q15061 677 aaKnown RBP eCLIP12.65□□□□□ -0.38
POLR1A-208ENST00000486964 NGDNQ8NEJ9 315 aaKnown RBP12.65□□□□□ -0.38
POLR1A-208ENST00000486964 NRKQ7Z2Y5 1582 aa12.65□□□□□ -0.38
POLR1A-208ENST00000486964 COL3A1P02461 1466 aaPredicted RBP12.65□□□□□ -0.39
POLR1A-208ENST00000486964 ANKRD26Q9UPS8 1709 aa12.64□□□□□ -0.39
POLR1A-208ENST00000486964 TMEM94Q12767 1356 aa12.64□□□□□ -0.39
POLR1A-208ENST00000486964 PDE3BQ13370 1112 aa12.64□□□□□ -0.39
POLR1A-208ENST00000486964 COG3Q96JB2 828 aa12.64□□□□□ -0.39
POLR1A-208ENST00000486964 CFAP53Q96M91 514 aa12.64□□□□□ -0.39
POLR1A-208ENST00000486964 OVOS2A0A0J9YW53 1432 aa12.64□□□□□ -0.39
POLR1A-208ENST00000486964 OVOS2Q6IE36 1432 aa12.64□□□□□ -0.39
POLR1A-208ENST00000486964 DCCP43146 1447 aa12.63□□□□□ -0.39
POLR1A-208ENST00000486964 FBLN1P23142 703 aa12.62□□□□□ -0.39
POLR1A-208ENST00000486964 STRCP1A6NGW2 1772 aa12.62□□□□□ -0.39
POLR1A-208ENST00000486964 B4GALNT3Q6L9W6 998 aa12.62□□□□□ -0.39
POLR1A-208ENST00000486964 POTEHQ6S545 545 aa12.62□□□□□ -0.39
POLR1A-208ENST00000486964 NGEFQ8N5V2 710 aa12.62□□□□□ -0.39
POLR1A-208ENST00000486964 C1orf167Q5SNV9 1468 aa12.61□□□□□ -0.39
POLR1A-208ENST00000486964 KIF20BQ96Q89 1820 aa12.61□□□□□ -0.39
POLR1A-208ENST00000486964 ZNF521Q96K83 1311 aa12.61□□□□□ -0.39
POLR1A-208ENST00000486964 ITSN1Q15811 1721 aa12.61□□□□□ -0.39
POLR1A-208ENST00000486964 HSPA1LP34931 641 aa12.61□□□□□ -0.39
POLR1A-208ENST00000486964 CCDC136Q96JN2 1154 aa12.61□□□□□ -0.39
POLR1A-208ENST00000486964 ORAI2Q96SN7 254 aa12.61□□□□□ -0.39
POLR1A-208ENST00000486964 SHPRHQ149N8 1683 aa12.6□□□□□ -0.39
POLR1A-208ENST00000486964 ZBTB22O15209 634 aa12.6□□□□□ -0.39
POLR1A-208ENST00000486964 ESCO1Q5FWF5 840 aa12.6□□□□□ -0.39
POLR1A-208ENST00000486964 MST1RQ04912 1400 aa12.59□□□□□ -0.39
POLR1A-208ENST00000486964 RGPD8O14715 1765 aaPredicted RBP12.59□□□□□ -0.39
POLR1A-208ENST00000486964 LRRC7Q96NW7 1537 aa12.59□□□□□ -0.39
POLR1A-208ENST00000486964 IL13P35225 146 aa12.59□□□□□ -0.39
POLR1A-208ENST00000486964 C14orf37Q86TY3 774 aa12.59□□□□□ -0.39
POLR1A-208ENST00000486964 PLEKHF1Q96S99 279 aa12.59□□□□□ -0.39
POLR1A-208ENST00000486964 EMILIN1Q9Y6C2 1016 aa12.59□□□□□ -0.39
POLR1A-208ENST00000486964 DIAPH1O60610 1272 aaKnown RBP12.58□□□□□ -0.4
POLR1A-208ENST00000486964 CADPS2Q86UW7 1296 aa12.58□□□□□ -0.4
POLR1A-208ENST00000486964 RUNDC1Q96C34 613 aa12.58□□□□□ -0.4
POLR1A-208ENST00000486964 APAF1O14727 1248 aa12.57□□□□□ -0.4
POLR1A-208ENST00000486964 TOM1O60784 492 aa12.57□□□□□ -0.4
POLR1A-208ENST00000486964 ATF3P18847 181 aa12.57□□□□□ -0.4
POLR1A-208ENST00000486964 ANP32AP39687 249 aaKnown RBP12.57□□□□□ -0.4
POLR1A-208ENST00000486964 CDK12Q9NYV4 1490 aaPredicted RBP12.57□□□□□ -0.4
POLR1A-208ENST00000486964 PSME1Q06323 249 aa12.56□□□□□ -0.4
POLR1A-208ENST00000486964 CCDC146Q8IYE0 955 aa12.56□□□□□ -0.4
POLR1A-208ENST00000486964 TRMT2AQ8IZ69 625 aaKnown RBP12.56□□□□□ -0.4
POLR1A-208ENST00000486964 FCHSD2O94868 740 aa12.55□□□□□ -0.4
POLR1A-208ENST00000486964 RRP1P56182 461 aaKnown RBP12.55□□□□□ -0.4
POLR1A-208ENST00000486964 NLRP6P59044 892 aa12.55□□□□□ -0.4
POLR1A-208ENST00000486964 RRS1Q15050 365 aaKnown RBP12.55□□□□□ -0.4
POLR1A-208ENST00000486964 USP54Q70EL1 1684 aa12.55□□□□□ -0.4
POLR1A-208ENST00000486964 SENP3-EIF4A1A0A087X0R7 540 aa12.54□□□□□ -0.4
POLR1A-208ENST00000486964 FOXO3O43524 673 aa12.54□□□□□ -0.4
POLR1A-208ENST00000486964 U2AF1L5P0DN76 240 aaPredicted RBP12.54□□□□□ -0.4
POLR1A-208ENST00000486964 PIP4K2BP78356 416 aa12.54□□□□□ -0.4
POLR1A-208ENST00000486964 U2AF1Q01081 240 aaKnown RBP eCLIP12.54□□□□□ -0.44e-6■■■□□ 19.2
POLR1A-208ENST00000486964 CCDC27Q2M243 656 aa12.54□□□□□ -0.4
POLR1A-208ENST00000486964 ABTB2Q8N961 1025 aa12.54□□□□□ -0.4
POLR1A-208ENST00000486964 NOP58Q9Y2X3 529 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms