RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 EZH2Q15910 746 aaKnown RBP7.73□□□□□ -1.17
SF1-217ENST00000486960 CCDC97Q96F63 343 aaPredicted RBP7.73□□□□□ -1.17
SF1-217ENST00000486960 GJD4Q96KN9 370 aaPredicted RBP7.73□□□□□ -1.17
SF1-217ENST00000486960 AK7Q96M32 723 aa7.73□□□□□ -1.17
SF1-217ENST00000486960 KDM4CQ9H3R0 1056 aa7.73□□□□□ -1.17
SF1-217ENST00000486960 WDR90Q96KV7 1748 aa7.72□□□□□ -1.17
SF1-217ENST00000486960 DISP2A7MBM2 1401 aa7.72□□□□□ -1.17
SF1-217ENST00000486960 ZNF316A6NFI3 1004 aaPredicted RBP7.72□□□□□ -1.17
SF1-217ENST00000486960 RETREG2Q8NC44 543 aa7.72□□□□□ -1.17
SF1-217ENST00000486960 SYCP2Q9BX26 1530 aa7.72□□□□□ -1.17
SF1-217ENST00000486960 COL22A1Q8NFW1 1626 aaPredicted RBP7.71□□□□□ -1.17
SF1-217ENST00000486960 TXNDC2Q86VQ3 553 aa7.71□□□□□ -1.18
SF1-217ENST00000486960 LRRIQ1Q96JM4 1722 aa7.71□□□□□ -1.18
SF1-217ENST00000486960 ARHGAP35Q9NRY4 1499 aa7.7□□□□□ -1.18
SF1-217ENST00000486960 KCNQ2O43526 872 aa7.7□□□□□ -1.18
SF1-217ENST00000486960 CCDC27Q2M243 656 aa7.7□□□□□ -1.18
SF1-217ENST00000486960 FAM161AQ3B820 660 aa7.7□□□□□ -1.18
SF1-217ENST00000486960 REM2Q8IYK8 340 aaPredicted RBP7.7□□□□□ -1.18
SF1-217ENST00000486960 SLC26A8Q96RN1 970 aa7.7□□□□□ -1.18
SF1-217ENST00000486960 SPON1Q9HCB6 807 aa7.7□□□□□ -1.18
SF1-217ENST00000486960 RYDENQ9NUL5 291 aaKnown RBP7.7□□□□□ -1.18
SF1-217ENST00000486960 CLEC11AQ9Y240 323 aa7.7□□□□□ -1.18
SF1-217ENST00000486960 SSUH2Q9Y2M2 353 aa7.7□□□□□ -1.18
SF1-217ENST00000486960 IRF5Q13568 498 aa7.69□□□□□ -1.18
SF1-217ENST00000486960 CLUAP1Q96AJ1 413 aa7.69□□□□□ -1.18
SF1-217ENST00000486960 WWC3Q9ULE0 1092 aa7.69□□□□□ -1.18
SF1-217ENST00000486960 PIK3C2BO00750 1634 aa7.69□□□□□ -1.18
SF1-217ENST00000486960 PTCH1Q13635 1447 aa7.69□□□□□ -1.18
SF1-217ENST00000486960 ERVK-7P63135 1459 aa7.68□□□□□ -1.18
SF1-217ENST00000486960 LAMC1P11047 1609 aa7.68□□□□□ -1.18
SF1-217ENST00000486960 NCLP19338 710 aaKnown RBP7.68□□□□□ -1.18
SF1-217ENST00000486960 SEPT12Q8IYM1 358 aa7.68□□□□□ -1.18
SF1-217ENST00000486960 PDE4DIPQ5VU43 2346 aa7.67□□□□□ -1.18
SF1-217ENST00000486960 ANKRD13AQ8IZ07 590 aa7.67□□□□□ -1.18
SF1-217ENST00000486960 ZNF526Q8TF50 670 aaPredicted RBP7.67□□□□□ -1.18
SF1-217ENST00000486960 CAMKK2Q96RR4 588 aa7.67□□□□□ -1.18
SF1-217ENST00000486960 SETQ01105 290 aaPredicted RBP7.66□□□□□ -1.18
SF1-217ENST00000486960 TMED8Q6PL24 325 aaPredicted RBP7.66□□□□□ -1.18
SF1-217ENST00000486960 SPDYE1Q8NFV5 336 aaPredicted RBP7.66□□□□□ -1.18
SF1-217ENST00000486960 LRRC59Q96AG4 307 aaKnown RBP7.66□□□□□ -1.18
SF1-217ENST00000486960 ZNF777Q9ULD5 760 aaPredicted RBP7.66□□□□□ -1.18
SF1-217ENST00000486960 SPAG9O60271 1321 aaKnown RBP7.66□□□□□ -1.18
SF1-217ENST00000486960 MYOM2P54296 1465 aa7.66□□□□□ -1.18
SF1-217ENST00000486960 MST1RQ04912 1400 aa7.65□□□□□ -1.18
SF1-217ENST00000486960 FAM182BQ5T319 152 aa7.65□□□□□ -1.18
SF1-217ENST00000486960 KRT27Q7Z3Y8 459 aa7.65□□□□□ -1.18
SF1-217ENST00000486960 PLCD3Q8N3E9 789 aa7.65□□□□□ -1.18
SF1-217ENST00000486960 NAP1L5Q96NT1 182 aaPredicted RBP7.65□□□□□ -1.18
SF1-217ENST00000486960 DLC1Q96QB1 1528 aa7.65□□□□□ -1.18
SF1-217ENST00000486960 PDGFDQ9GZP0 370 aaPredicted RBP7.65□□□□□ -1.18
SF1-217ENST00000486960 CEP152O94986 1710 aa7.64□□□□□ -1.19
SF1-217ENST00000486960 ATP10DQ9P241 1426 aa7.64□□□□□ -1.19
SF1-217ENST00000486960 TESPA1A2RU30 521 aaPredicted RBP7.64□□□□□ -1.19
SF1-217ENST00000486960 KDM4AO75164 1064 aa7.64□□□□□ -1.19
SF1-217ENST00000486960 PTGER2P43116 358 aa7.64□□□□□ -1.19
SF1-217ENST00000486960 IRX6P78412 446 aaPredicted RBP7.64□□□□□ -1.19
SF1-217ENST00000486960 ARHGEF1Q92888 912 aaKnown RBP7.64□□□□□ -1.19
SF1-217ENST00000486960 PRDM16Q9HAZ2 1276 aa7.64□□□□□ -1.19
SF1-217ENST00000486960 SLIT2O94813 1529 aa7.63□□□□□ -1.19
SF1-217ENST00000486960 JMYQ8N9B5 988 aa7.63□□□□□ -1.19
SF1-217ENST00000486960 SYT17Q9BSW7 474 aa7.63□□□□□ -1.19
SF1-217ENST00000486960 FHDC1Q9C0D6 1143 aaPredicted RBP7.63□□□□□ -1.19
SF1-217ENST00000486960 CROCC2H7BZ55 1655 aa7.63□□□□□ -1.19
SF1-217ENST00000486960 TMEM131LA2VDJ0 1609 aa7.63□□□□□ -1.19
SF1-217ENST00000486960 ADGRB2O60241 1585 aa7.63□□□□□ -1.19
SF1-217ENST00000486960 TMEM2Q9UHN6 1383 aa7.62□□□□□ -1.19
SF1-217ENST00000486960 A0A0U1RQG5 324 aaPredicted RBP7.62□□□□□ -1.19
SF1-217ENST00000486960 ZEB1P37275 1124 aaPredicted RBP7.62□□□□□ -1.19
SF1-217ENST00000486960 HTRA3P83110 453 aa7.62□□□□□ -1.19
SF1-217ENST00000486960 SMYD5Q6GMV2 418 aa7.62□□□□□ -1.19
SF1-217ENST00000486960 TEX2Q8IWB9 1127 aa7.62□□□□□ -1.19
SF1-217ENST00000486960 KRI1Q8N9T8 703 aaKnown RBP7.62□□□□□ -1.19
SF1-217ENST00000486960 STAG3Q9UJ98 1225 aa7.62□□□□□ -1.19
SF1-217ENST00000486960 PLCH1Q4KWH8 1693 aa7.62□□□□□ -1.19
SF1-217ENST00000486960 FAM83GA6ND36 823 aa7.61□□□□□ -1.19
SF1-217ENST00000486960 SMARCA5O60264 1052 aaPredicted RBP7.61□□□□□ -1.19
SF1-217ENST00000486960 CADPS2Q86UW7 1296 aa7.61□□□□□ -1.19
SF1-217ENST00000486960 CCDC136Q96JN2 1154 aa7.61□□□□□ -1.19
SF1-217ENST00000486960 SPATA32Q96LK8 384 aa7.61□□□□□ -1.19
SF1-217ENST00000486960 EFCAB6Q5THR3 1501 aa7.61□□□□□ -1.19
SF1-217ENST00000486960 MYO5BQ9ULV0 1848 aa7.61□□□□□ -1.19
SF1-217ENST00000486960 TROQ12816 1431 aaPredicted RBP7.61□□□□□ -1.19
SF1-217ENST00000486960 FMN1Q68DA7 1419 aa7.61□□□□□ -1.19
SF1-217ENST00000486960 NCOA3Q9Y6Q9 1424 aa7.61□□□□□ -1.19
SF1-217ENST00000486960 A0A0C4DFX4 3053 aa7.6□□□□□ -1.19
SF1-217ENST00000486960 PITPNM1O00562 1244 aa7.6□□□□□ -1.19
SF1-217ENST00000486960 ONECUT3O60422 494 aaPredicted RBP7.6□□□□□ -1.19
SF1-217ENST00000486960 PRR29P0C7W0 189 aa7.6□□□□□ -1.19
SF1-217ENST00000486960 PTMSP20962 102 aa7.6□□□□□ -1.19
SF1-217ENST00000486960 KCNA1Q09470 495 aa7.6□□□□□ -1.19
SF1-217ENST00000486960 CHRDL2Q6WN34 429 aa7.6□□□□□ -1.19
SF1-217ENST00000486960 NOL8Q76FK4 1167 aaKnown RBP7.6□□□□□ -1.19
SF1-217ENST00000486960 PRXQ9BXM0 1461 aa7.6□□□□□ -1.19
SF1-217ENST00000486960 ADGRB3O60242 1522 aa7.59□□□□□ -1.19
SF1-217ENST00000486960 NALCNQ8IZF0 1738 aa7.59□□□□□ -1.19
SF1-217ENST00000486960 SEMA3EO15041 775 aa7.59□□□□□ -1.19
SF1-217ENST00000486960 APLP1P51693 650 aa7.59□□□□□ -1.19
SF1-217ENST00000486960 HNRNPMP52272 730 aaKnown RBP eCLIP7.59□□□□□ -1.19
SF1-217ENST00000486960 ACIN1Q9UKV3 1341 aaKnown RBP7.58□□□□□ -1.2
SF1-217ENST00000486960 WASHC2CQ9Y4E1 1318 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms