RNA–Protein interactions for RNA: ENST00000486560.1

GSDMB-210, Transcript of gasdermin B, humanhuman

TSL 3

Gene GSDMB, Length 318 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-210ENST00000486560 USP47Q96K76 1375 aa16.86■□□□□ 0.29
GSDMB-210ENST00000486560 PLCH1Q4KWH8 1693 aa16.85■□□□□ 0.29
GSDMB-210ENST00000486560 ATAD2Q6PL18 1390 aa16.83■□□□□ 0.28
GSDMB-210ENST00000486560 PHRF1Q9P1Y6 1649 aaKnown RBP16.82■□□□□ 0.28
GSDMB-210ENST00000486560 PLEKHG3A1L390 1219 aa16.82■□□□□ 0.28
GSDMB-210ENST00000486560 USP21Q9UK80 565 aa16.82■□□□□ 0.28
GSDMB-210ENST00000486560 POLR3AO14802 1390 aaPredicted RBP16.81■□□□□ 0.28
GSDMB-210ENST00000486560 ZBTB7CA1YPR0 619 aa16.81■□□□□ 0.28
GSDMB-210ENST00000486560 ABTB2Q8N961 1025 aa16.81■□□□□ 0.28
GSDMB-210ENST00000486560 POLR3GLQ9BT43 218 aa16.81■□□□□ 0.28
GSDMB-210ENST00000486560 CRYBG1Q9Y4K1 1723 aa16.81■□□□□ 0.28
GSDMB-210ENST00000486560 SBNO2Q9Y2G9 1366 aa16.8■□□□□ 0.28
GSDMB-210ENST00000486560 MON2Q7Z3U7 1717 aa16.79■□□□□ 0.28
GSDMB-210ENST00000486560 QTRT2Q9H974 415 aaKnown RBP16.79■□□□□ 0.28
GSDMB-210ENST00000486560 CCDC9Q9Y3X0 531 aaKnown RBP16.79■□□□□ 0.28
GSDMB-210ENST00000486560 KTN1Q86UP2 1357 aaKnown RBP16.78■□□□□ 0.28
GSDMB-210ENST00000486560 RXRBP28702 533 aa16.78■□□□□ 0.28
GSDMB-210ENST00000486560 USP6P35125 1406 aa16.78■□□□□ 0.28
GSDMB-210ENST00000486560 TMF1P82094 1093 aa16.77■□□□□ 0.28
GSDMB-210ENST00000486560 SOX12O15370 315 aa16.76■□□□□ 0.27
GSDMB-210ENST00000486560 HDGFL2Q7Z4V5 671 aaPredicted RBP16.76■□□□□ 0.27
GSDMB-210ENST00000486560 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.76■□□□□ 0.27
GSDMB-210ENST00000486560 COL14A1Q05707 1796 aaKnown RBP16.76■□□□□ 0.27
GSDMB-210ENST00000486560 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.76■□□□□ 0.27
GSDMB-210ENST00000486560 NWD2Q9ULI1 1742 aa16.76■□□□□ 0.27
GSDMB-210ENST00000486560 PIK3C2AO00443 1686 aa16.75■□□□□ 0.27
GSDMB-210ENST00000486560 NLRP6P59044 892 aa16.75■□□□□ 0.27
GSDMB-210ENST00000486560 ZC3H6P61129 1189 aaKnown RBP16.75■□□□□ 0.27
GSDMB-210ENST00000486560 PRDM11Q9NQV5 511 aa16.75■□□□□ 0.27
GSDMB-210ENST00000486560 NRKQ7Z2Y5 1582 aa16.74■□□□□ 0.27
GSDMB-210ENST00000486560 NLRP13Q86W25 1043 aa16.74■□□□□ 0.27
GSDMB-210ENST00000486560 TESK2Q96S53 571 aa16.74■□□□□ 0.27
GSDMB-210ENST00000486560 SLC12A5Q9H2X9 1139 aa16.74■□□□□ 0.27
GSDMB-210ENST00000486560 TRPC5Q9UL62 973 aaPredicted RBP16.74■□□□□ 0.27
GSDMB-210ENST00000486560 SOCS7O14512 581 aa16.73■□□□□ 0.27
GSDMB-210ENST00000486560 CHRNA2Q15822 529 aa16.73■□□□□ 0.27
GSDMB-210ENST00000486560 ZNF692Q9BU19 519 aaPredicted RBP16.73■□□□□ 0.27
GSDMB-210ENST00000486560 A0A0G2JS52 829 aa16.72■□□□□ 0.27
GSDMB-210ENST00000486560 SLC24A1O60721 1099 aa16.72■□□□□ 0.27
GSDMB-210ENST00000486560 EIF4G2P78344 907 aaKnown RBP eCLIP16.72■□□□□ 0.27
GSDMB-210ENST00000486560 MYT1Q01538 1121 aa16.72■□□□□ 0.27
GSDMB-210ENST00000486560 TERF2IPQ9NYB0 399 aa16.72■□□□□ 0.27
GSDMB-210ENST00000486560 FAM83GA6ND36 823 aa16.71■□□□□ 0.27
GSDMB-210ENST00000486560 RBM6P78332 1123 aaKnown RBP16.71■□□□□ 0.27
GSDMB-210ENST00000486560 BTG4Q9NY30 223 aa16.71■□□□□ 0.27
GSDMB-210ENST00000486560 KIAA0232Q92628 1395 aa16.71■□□□□ 0.27
GSDMB-210ENST00000486560 TTC21BQ7Z4L5 1316 aa16.7■□□□□ 0.26
GSDMB-210ENST00000486560 HSPA5P11021 654 aaKnown RBP16.7■□□□□ 0.26
GSDMB-210ENST00000486560 CDCA8Q53HL2 280 aa16.7■□□□□ 0.26
GSDMB-210ENST00000486560 UNC5CLQ8IV45 518 aa16.7■□□□□ 0.26
GSDMB-210ENST00000486560 FNBP4Q8N3X1 1017 aaPredicted RBP16.7■□□□□ 0.26
GSDMB-210ENST00000486560 STRN4Q9NRL3 753 aa16.7■□□□□ 0.26
GSDMB-210ENST00000486560 NRAPQ86VF7 1730 aa16.7■□□□□ 0.26
GSDMB-210ENST00000486560 BCL9LQ86UU0 1499 aa16.69■□□□□ 0.26
GSDMB-210ENST00000486560 BRD4O60885 1362 aaPredicted RBP16.69■□□□□ 0.26
GSDMB-210ENST00000486560 SLIT2O94813 1529 aa16.69■□□□□ 0.26
GSDMB-210ENST00000486560 RGPD5Q99666 1765 aa16.69■□□□□ 0.26
GSDMB-210ENST00000486560 MYOM1P52179 1685 aa16.69■□□□□ 0.26
GSDMB-210ENST00000486560 A0A1W2PP64 1363 aa16.68■□□□□ 0.26
GSDMB-210ENST00000486560 ATRNO75882 1429 aa16.68■□□□□ 0.26
GSDMB-210ENST00000486560 CPSF1Q10570 1443 aaKnown RBP16.68■□□□□ 0.26
GSDMB-210ENST00000486560 KIF20BQ96Q89 1820 aa16.68■□□□□ 0.26
GSDMB-210ENST00000486560 TTC21AQ8NDW8 1320 aa16.68■□□□□ 0.26
GSDMB-210ENST00000486560 LTN1O94822 1766 aa16.67■□□□□ 0.26
GSDMB-210ENST00000486560 NME9Q86XW9 330 aa16.67■□□□□ 0.26
GSDMB-210ENST00000486560 CD163L1Q9NR16 1453 aa16.67■□□□□ 0.26
GSDMB-210ENST00000486560 RGS12O14924 1447 aa16.66■□□□□ 0.26
GSDMB-210ENST00000486560 GCP02774 474 aa16.66■□□□□ 0.26
GSDMB-210ENST00000486560 EVA1CP58658 441 aa16.66■□□□□ 0.26
GSDMB-210ENST00000486560 ZRANB1Q9UGI0 708 aa16.66■□□□□ 0.26
GSDMB-210ENST00000486560 BRWD3Q6RI45 1802 aa16.66■□□□□ 0.26
GSDMB-210ENST00000486560 NINLQ9Y2I6 1382 aa16.65■□□□□ 0.26
GSDMB-210ENST00000486560 EDC4Q6P2E9 1401 aaKnown RBP16.65■□□□□ 0.26
GSDMB-210ENST00000486560 GJD4Q96KN9 370 aaPredicted RBP16.65■□□□□ 0.26
GSDMB-210ENST00000486560 USP19O94966 1318 aa16.65■□□□□ 0.26
GSDMB-210ENST00000486560 GLI3P10071 1580 aa16.64■□□□□ 0.25
GSDMB-210ENST00000486560 PUS7Q96PZ0 661 aaKnown RBP16.64■□□□□ 0.25
GSDMB-210ENST00000486560 USP35Q9P2H5 1018 aa16.64■□□□□ 0.25
GSDMB-210ENST00000486560 SSH2Q76I76 1423 aa16.63■□□□□ 0.25
GSDMB-210ENST00000486560 SLIT3O75094 1523 aa16.63■□□□□ 0.25
GSDMB-210ENST00000486560 CDK12Q9NYV4 1490 aaPredicted RBP16.62■□□□□ 0.25
GSDMB-210ENST00000486560 ANKRD36BQ8N2N9 1353 aa16.62■□□□□ 0.25
GSDMB-210ENST00000486560 VPS72Q15906 364 aa16.61■□□□□ 0.25
GSDMB-210ENST00000486560 KCNH5Q8NCM2 988 aa16.61■□□□□ 0.25
GSDMB-210ENST00000486560 LMO7Q8WWI1 1683 aa16.6■□□□□ 0.25
GSDMB-210ENST00000486560 USP54Q70EL1 1684 aa16.59■□□□□ 0.25
GSDMB-210ENST00000486560 CSB-PGBD3P0DP91 1061 aa16.59■□□□□ 0.25
GSDMB-210ENST00000486560 FAM98CQ17RN3 349 aaKnown RBP16.59■□□□□ 0.25
GSDMB-210ENST00000486560 COG3Q96JB2 828 aa16.59■□□□□ 0.25
GSDMB-210ENST00000486560 CAMTA1Q9Y6Y1 1673 aa16.59■□□□□ 0.25
GSDMB-210ENST00000486560 GGNBP2Q9H3C7 697 aa16.58■□□□□ 0.24
GSDMB-210ENST00000486560 NSD3Q9BZ95 1437 aa16.57■□□□□ 0.24
GSDMB-210ENST00000486560 CPDO75976 1380 aa16.57■□□□□ 0.24
GSDMB-210ENST00000486560 COL18A1P39060 1754 aa16.56■□□□□ 0.24
GSDMB-210ENST00000486560 NFAT5O94916 1531 aa16.56■□□□□ 0.24
GSDMB-210ENST00000486560 SEPT12Q8IYM1 358 aa16.56■□□□□ 0.24
GSDMB-210ENST00000486560 LARP1Q6PKG0 1096 aaKnown RBP16.55■□□□□ 0.24
GSDMB-210ENST00000486560 TOM1L2Q6ZVM7 507 aa16.55■□□□□ 0.24
GSDMB-210ENST00000486560 COL5A2P05997 1499 aaPredicted RBP16.54■□□□□ 0.24
GSDMB-210ENST00000486560 USP31Q70CQ4 1352 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms