RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 TRAK1Q9UPV9 953 aa18.51■□□□□ 0.55
SSR4-211ENST00000486204 PRAM1Q96QH2 718 aa18.5■□□□□ 0.55
SSR4-211ENST00000486204 NWD2Q9ULI1 1742 aa18.49■□□□□ 0.55
SSR4-211ENST00000486204 LMOD2Q6P5Q4 547 aa18.49■□□□□ 0.55
SSR4-211ENST00000486204 ITSN1Q15811 1721 aa18.49■□□□□ 0.55
SSR4-211ENST00000486204 DISP2A7MBM2 1401 aa18.49■□□□□ 0.55
SSR4-211ENST00000486204 PLCH1Q4KWH8 1693 aa18.48■□□□□ 0.55
SSR4-211ENST00000486204 DCAF8L1A6NGE4 600 aa18.48■□□□□ 0.55
SSR4-211ENST00000486204 RGPD1P0DJD0 1748 aa18.48■□□□□ 0.55
SSR4-211ENST00000486204 TNS3Q68CZ2 1445 aa18.48■□□□□ 0.55
SSR4-211ENST00000486204 TOPAZ1Q8N9V7 1692 aa18.47■□□□□ 0.55
SSR4-211ENST00000486204 ROCK2O75116 1388 aaKnown RBP18.47■□□□□ 0.55
SSR4-211ENST00000486204 CAMKK2Q96RR4 588 aa18.47■□□□□ 0.55
SSR4-211ENST00000486204 KIF1AQ12756 1690 aa18.47■□□□□ 0.55
SSR4-211ENST00000486204 BTG4Q9NY30 223 aa18.46■□□□□ 0.55
SSR4-211ENST00000486204 TIMELESSQ9UNS1 1208 aa18.46■□□□□ 0.55
SSR4-211ENST00000486204 PHF8Q9UPP1 1060 aa18.45■□□□□ 0.54
SSR4-211ENST00000486204 SAFB2Q14151 953 aaKnown RBP eCLIP18.44■□□□□ 0.54
SSR4-211ENST00000486204 TULP4Q9NRJ4 1543 aa18.44■□□□□ 0.54
SSR4-211ENST00000486204 SBNO1A3KN83 1393 aa18.43■□□□□ 0.54
SSR4-211ENST00000486204 TRIM37O94972 964 aa18.43■□□□□ 0.54
SSR4-211ENST00000486204 POGKQ9P215 609 aa18.43■□□□□ 0.54
SSR4-211ENST00000486204 ARHGEF10O15013 1369 aa18.42■□□□□ 0.54
SSR4-211ENST00000486204 PPP1R1BQ9UD71 204 aaPredicted RBP18.42■□□□□ 0.54
SSR4-211ENST00000486204 APBA3O96018 575 aa18.41■□□□□ 0.54
SSR4-211ENST00000486204 SPATA31A5Q5VU36 1347 aa18.41■□□□□ 0.54
SSR4-211ENST00000486204 SPATA31A7Q8IWB4 1347 aa18.41■□□□□ 0.54
SSR4-211ENST00000486204 MINK1Q8N4C8 1332 aaPredicted RBP18.41■□□□□ 0.54
SSR4-211ENST00000486204 NBPF14Q5TI25 921 aa18.4■□□□□ 0.54
SSR4-211ENST00000486204 FAM196AQ6ZSG2 479 aa18.4■□□□□ 0.54
SSR4-211ENST00000486204 ANKARQ7Z5J8 1434 aa18.4■□□□□ 0.54
SSR4-211ENST00000486204 ATP7BP35670 1465 aa18.39■□□□□ 0.54
SSR4-211ENST00000486204 SPON1Q9HCB6 807 aa18.39■□□□□ 0.53
SSR4-211ENST00000486204 CENPJQ9HC77 1338 aaPredicted RBP18.39■□□□□ 0.53
SSR4-211ENST00000486204 PARD3Q8TEW0 1356 aa18.39■□□□□ 0.53
SSR4-211ENST00000486204 NRAPQ86VF7 1730 aa18.38■□□□□ 0.53
SSR4-211ENST00000486204 TNS1Q9HBL0 1735 aaKnown RBP18.38■□□□□ 0.53
SSR4-211ENST00000486204 HIRIP3Q9BW71 556 aaPredicted RBP18.38■□□□□ 0.53
SSR4-211ENST00000486204 EIF3AQ14152 1382 aaKnown RBP18.37■□□□□ 0.53
SSR4-211ENST00000486204 KCNQ2O43526 872 aa18.36■□□□□ 0.53
SSR4-211ENST00000486204 ABCA3Q99758 1704 aa18.36■□□□□ 0.53
SSR4-211ENST00000486204 CARD11Q9BXL7 1154 aa18.36■□□□□ 0.53
SSR4-211ENST00000486204 TRPM3Q9HCF6 1732 aaPredicted RBP18.35■□□□□ 0.53
SSR4-211ENST00000486204 SBNO2Q9Y2G9 1366 aa18.35■□□□□ 0.53
SSR4-211ENST00000486204 NINLQ9Y2I6 1382 aa18.35■□□□□ 0.53
SSR4-211ENST00000486204 PRR36Q9H6K5 1346 aa18.35■□□□□ 0.53
SSR4-211ENST00000486204 WASLO00401 505 aaPredicted RBP18.35■□□□□ 0.53
SSR4-211ENST00000486204 IFFO2Q5TF58 517 aa18.35■□□□□ 0.53
SSR4-211ENST00000486204 PMFBP1Q8TBY8 1022 aa18.34■□□□□ 0.53
SSR4-211ENST00000486204 SENP3-EIF4A1A0A087X0R7 540 aa18.33■□□□□ 0.52
SSR4-211ENST00000486204 THSD7AQ9UPZ6 1657 aa18.33■□□□□ 0.52
SSR4-211ENST00000486204 COL14A1Q05707 1796 aaKnown RBP18.32■□□□□ 0.52
SSR4-211ENST00000486204 ZNF784Q8NCA9 323 aaPredicted RBP18.32■□□□□ 0.52
SSR4-211ENST00000486204 AKAP12Q02952 1782 aa18.32■□□□□ 0.52
SSR4-211ENST00000486204 SPATA31A1Q5TZJ5 1347 aa18.31■□□□□ 0.52
SSR4-211ENST00000486204 ALS2Q96Q42 1657 aa18.3■□□□□ 0.52
SSR4-211ENST00000486204 PRDM11Q9NQV5 511 aa18.29■□□□□ 0.52
SSR4-211ENST00000486204 USP47Q96K76 1375 aa18.29■□□□□ 0.52
SSR4-211ENST00000486204 PDE3BQ13370 1112 aa18.28■□□□□ 0.52
SSR4-211ENST00000486204 CDK19Q9BWU1 502 aa18.28■□□□□ 0.52
SSR4-211ENST00000486204 CRYBG1Q9Y4K1 1723 aa18.27■□□□□ 0.52
SSR4-211ENST00000486204 RREB1Q92766 1687 aa18.27■□□□□ 0.52
SSR4-211ENST00000486204 MON2Q7Z3U7 1717 aa18.26■□□□□ 0.51
SSR4-211ENST00000486204 NUP188Q5SRE5 1749 aa18.26■□□□□ 0.51
SSR4-211ENST00000486204 NUDT16Q96DE0 195 aaKnown RBP18.25■□□□□ 0.51
SSR4-211ENST00000486204 STRN4Q9NRL3 753 aa18.25■□□□□ 0.51
SSR4-211ENST00000486204 CAMTA1Q9Y6Y1 1673 aa18.25■□□□□ 0.51
SSR4-211ENST00000486204 C1QTNF8P60827 252 aa18.24■□□□□ 0.51
SSR4-211ENST00000486204 TESK2Q96S53 571 aa18.24■□□□□ 0.51
SSR4-211ENST00000486204 USP35Q9P2H5 1018 aa18.24■□□□□ 0.51
SSR4-211ENST00000486204 NRKQ7Z2Y5 1582 aa18.24■□□□□ 0.51
SSR4-211ENST00000486204 MYOM1P52179 1685 aa18.24■□□□□ 0.51
SSR4-211ENST00000486204 EVC2Q86UK5 1308 aa18.23■□□□□ 0.51
SSR4-211ENST00000486204 ST20-MTHFSA0A0A6YYL1 179 aa18.23■□□□□ 0.51
SSR4-211ENST00000486204 CABP2Q9NPB3 220 aa18.23■□□□□ 0.51
SSR4-211ENST00000486204 PPIP5K1Q6PFW1 1433 aa18.23■□□□□ 0.51
SSR4-211ENST00000486204 BARGINQ6ZT62 677 aa18.22■□□□□ 0.51
SSR4-211ENST00000486204 POLR3AO14802 1390 aaPredicted RBP18.21■□□□□ 0.51
SSR4-211ENST00000486204 PAK3O75914 559 aaPredicted RBP18.21■□□□□ 0.51
SSR4-211ENST00000486204 SRPK2P78362 688 aaKnown RBP18.21■□□□□ 0.51
SSR4-211ENST00000486204 CHRNA2Q15822 529 aa18.21■□□□□ 0.51
SSR4-211ENST00000486204 EVA1CP58658 441 aa18.2■□□□□ 0.5
SSR4-211ENST00000486204 CCDC61Q9Y6R9 512 aa18.2■□□□□ 0.5
SSR4-211ENST00000486204 KIAA0232Q92628 1395 aa18.19■□□□□ 0.5
SSR4-211ENST00000486204 PHRF1Q9P1Y6 1649 aaKnown RBP18.19■□□□□ 0.5
SSR4-211ENST00000486204 PLEKHG3A1L390 1219 aa18.18■□□□□ 0.5
SSR4-211ENST00000486204 NGDNQ8NEJ9 315 aaKnown RBP18.17■□□□□ 0.5
SSR4-211ENST00000486204 UTRNP46939 3433 aa18.17■□□□□ 0.5
SSR4-211ENST00000486204 PIK3C2AO00443 1686 aa18.16■□□□□ 0.5
SSR4-211ENST00000486204 CD163L1Q9NR16 1453 aa18.16■□□□□ 0.5
SSR4-211ENST00000486204 ZC3H6P61129 1189 aaKnown RBP18.16■□□□□ 0.5
SSR4-211ENST00000486204 ZBTB7AO95365 584 aa18.15■□□□□ 0.5
SSR4-211ENST00000486204 TCP11L2Q8N4U5 519 aa18.15■□□□□ 0.5
SSR4-211ENST00000486204 ACEP12821 1306 aa18.15■□□□□ 0.5
SSR4-211ENST00000486204 USP54Q70EL1 1684 aa18.15■□□□□ 0.5
SSR4-211ENST00000486204 C11orf95C9JLR9 678 aaPredicted RBP18.14■□□□□ 0.49
SSR4-211ENST00000486204 PDGFDQ9GZP0 370 aaPredicted RBP18.14■□□□□ 0.49
SSR4-211ENST00000486204 USP6P35125 1406 aa18.14■□□□□ 0.49
SSR4-211ENST00000486204 CPSF1Q10570 1443 aaKnown RBP18.14■□□□□ 0.49
SSR4-211ENST00000486204 PLSCR1O15162 318 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms