RNA–Protein interactions for RNA: ENST00000485883.5

CHRD-215, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-215ENST00000485883 NUDT16Q96DE0 195 aaKnown RBP29.64■■■□□ 2.34
CHRD-215ENST00000485883 ATP7BP35670 1465 aa29.63■■■□□ 2.33
CHRD-215ENST00000485883 KRT27Q7Z3Y8 459 aa29.63■■■□□ 2.33
CHRD-215ENST00000485883 NRAPQ86VF7 1730 aa29.62■■■□□ 2.33
CHRD-215ENST00000485883 FAM98CQ17RN3 349 aaKnown RBP29.61■■■□□ 2.33
CHRD-215ENST00000485883 CDK19Q9BWU1 502 aa29.61■■■□□ 2.33
CHRD-215ENST00000485883 A0A0G2JS52 829 aa29.6■■■□□ 2.33
CHRD-215ENST00000485883 MYT1Q01538 1121 aa29.6■■■□□ 2.33
CHRD-215ENST00000485883 NBPF1Q3BBV0 1214 aa29.58■■■□□ 2.33
CHRD-215ENST00000485883 COL14A1Q05707 1796 aaKnown RBP29.57■■■□□ 2.32
CHRD-215ENST00000485883 CRYBG1Q9Y4K1 1723 aa29.56■■■□□ 2.32
CHRD-215ENST00000485883 SF3B2Q13435 895 aaKnown RBP29.55■■■□□ 2.32
CHRD-215ENST00000485883 PRDM11Q9NQV5 511 aa29.55■■■□□ 2.32
CHRD-215ENST00000485883 NUTM2GQ5VZR2 741 aa29.54■■■□□ 2.32
CHRD-215ENST00000485883 SPATA31A5Q5VU36 1347 aa29.53■■■□□ 2.32
CHRD-215ENST00000485883 SPATA31A7Q8IWB4 1347 aa29.53■■■□□ 2.32
CHRD-215ENST00000485883 ITSN1Q15811 1721 aa29.52■■■□□ 2.32
CHRD-215ENST00000485883 CHRNA2Q15822 529 aa29.52■■■□□ 2.32
CHRD-215ENST00000485883 KIAA0232Q92628 1395 aa29.52■■■□□ 2.32
CHRD-215ENST00000485883 ACEP12821 1306 aa29.51■■■□□ 2.32
CHRD-215ENST00000485883 NBPF8Q3BBV2 869 aa29.51■■■□□ 2.31
CHRD-215ENST00000485883 CCDC61Q9Y6R9 512 aa29.51■■■□□ 2.31
CHRD-215ENST00000485883 FAM182BQ5T319 152 aa29.5■■■□□ 2.31
CHRD-215ENST00000485883 POLR3AO14802 1390 aaPredicted RBP29.5■■■□□ 2.31
CHRD-215ENST00000485883 KIAA1210Q9ULL0 1709 aa29.48■■■□□ 2.31
CHRD-215ENST00000485883 ZC3H6P61129 1189 aaKnown RBP29.48■■■□□ 2.31
CHRD-215ENST00000485883 PLEKHG3A1L390 1219 aa29.47■■■□□ 2.31
CHRD-215ENST00000485883 TOPAZ1Q8N9V7 1692 aa29.46■■■□□ 2.31
CHRD-215ENST00000485883 STRN4Q9NRL3 753 aa29.45■■■□□ 2.31
CHRD-215ENST00000485883 PHRF1Q9P1Y6 1649 aaKnown RBP29.44■■■□□ 2.3
CHRD-215ENST00000485883 SPATA31A1Q5TZJ5 1347 aa29.43■■■□□ 2.3
CHRD-215ENST00000485883 CABP2Q9NPB3 220 aa29.42■■■□□ 2.3
CHRD-215ENST00000485883 BAG6P46379 1132 aa29.41■■■□□ 2.3
CHRD-215ENST00000485883 SRPK2P78362 688 aaKnown RBP29.41■■■□□ 2.3
CHRD-215ENST00000485883 ABTB2Q8N961 1025 aa29.41■■■□□ 2.3
CHRD-215ENST00000485883 CENPJQ9HC77 1338 aaPredicted RBP29.41■■■□□ 2.3
CHRD-215ENST00000485883 THSD7AQ9UPZ6 1657 aa29.4■■■□□ 2.3
CHRD-215ENST00000485883 EN1Q05925 392 aaPredicted RBP29.38■■■□□ 2.29
CHRD-215ENST00000485883 PPIP5K1Q6PFW1 1433 aa29.37■■■□□ 2.29
CHRD-215ENST00000485883 L3MBTL2Q969R5 705 aa29.37■■■□□ 2.29
CHRD-215ENST00000485883 USP35Q9P2H5 1018 aa29.37■■■□□ 2.29
CHRD-215ENST00000485883 NRKQ7Z2Y5 1582 aa29.35■■■□□ 2.29
CHRD-215ENST00000485883 PSDA5PKW4 1024 aaPredicted RBP29.35■■■□□ 2.29
CHRD-215ENST00000485883 USP19O94966 1318 aa29.35■■■□□ 2.29
CHRD-215ENST00000485883 EVA1CP58658 441 aa29.34■■■□□ 2.29
CHRD-215ENST00000485883 SIN3AQ96ST3 1273 aa29.34■■■□□ 2.29
CHRD-215ENST00000485883 SSH2Q76I76 1423 aa29.33■■■□□ 2.29
CHRD-215ENST00000485883 CAMTA1Q9Y6Y1 1673 aa29.33■■■□□ 2.29
CHRD-215ENST00000485883 LARP1Q6PKG0 1096 aaKnown RBP29.32■■■□□ 2.28
CHRD-215ENST00000485883 CABP1Q9NZU7 370 aa29.31■■■□□ 2.28
CHRD-215ENST00000485883 CPDO75976 1380 aa29.3■■■□□ 2.28
CHRD-215ENST00000485883 GCP02774 474 aa29.3■■■□□ 2.28
CHRD-215ENST00000485883 NLRP13Q86W25 1043 aa29.3■■■□□ 2.28
CHRD-215ENST00000485883 RGPD1P0DJD0 1748 aa29.29■■■□□ 2.28
CHRD-215ENST00000485883 QRICH2Q9H0J4 1663 aa29.29■■■□□ 2.28
CHRD-215ENST00000485883 TRIM37O94972 964 aa29.28■■■□□ 2.28
CHRD-215ENST00000485883 BARGINQ6ZT62 677 aa29.28■■■□□ 2.28
CHRD-215ENST00000485883 EZH2Q15910 746 aaKnown RBP29.27■■■□□ 2.28
CHRD-215ENST00000485883 LMO7Q8WWI1 1683 aa29.27■■■□□ 2.28
CHRD-215ENST00000485883 FAM196AQ6ZSG2 479 aa29.26■■■□□ 2.27
CHRD-215ENST00000485883 DISP2A7MBM2 1401 aa29.26■■■□□ 2.27
CHRD-215ENST00000485883 TNS1Q9HBL0 1735 aaKnown RBP29.25■■■□□ 2.27
CHRD-215ENST00000485883 USP6P35125 1406 aa29.24■■■□□ 2.27
CHRD-215ENST00000485883 NEUROD1Q13562 356 aa29.24■■■□□ 2.27
CHRD-215ENST00000485883 TCP11L2Q8N4U5 519 aa29.24■■■□□ 2.27
CHRD-215ENST00000485883 ZBTB7CA1YPR0 619 aa29.22■■■□□ 2.27
CHRD-215ENST00000485883 NLRP6P59044 892 aa29.22■■■□□ 2.27
CHRD-215ENST00000485883 PDE3BQ13370 1112 aa29.21■■■□□ 2.27
CHRD-215ENST00000485883 R3HDM1Q15032 1099 aaKnown RBP29.21■■■□□ 2.27
CHRD-215ENST00000485883 CAMKK2Q96RR4 588 aa29.21■■■□□ 2.27
CHRD-215ENST00000485883 BRD4O60885 1362 aaPredicted RBP29.21■■■□□ 2.27
CHRD-215ENST00000485883 COL5A2P05997 1499 aaPredicted RBP29.2■■■□□ 2.26
CHRD-215ENST00000485883 TRPM1Q7Z4N2 1603 aa29.2■■■□□ 2.26
CHRD-215ENST00000485883 EVC2Q86UK5 1308 aa29.2■■■□□ 2.26
CHRD-215ENST00000485883 LRP5O75197 1615 aa29.19■■■□□ 2.26
CHRD-215ENST00000485883 APBA3O96018 575 aa29.18■■■□□ 2.26
CHRD-215ENST00000485883 ROCK2O75116 1388 aaKnown RBP29.17■■■□□ 2.26
CHRD-215ENST00000485883 THRAP3Q9Y2W1 955 aaKnown RBP29.16■■■□□ 2.26
CHRD-215ENST00000485883 SLIT3O75094 1523 aa29.15■■■□□ 2.26
CHRD-215ENST00000485883 AATKQ6ZMQ8 1374 aa29.13■■■□□ 2.25
CHRD-215ENST00000485883 PIK3C2AO00443 1686 aa29.12■■■□□ 2.25
CHRD-215ENST00000485883 CRB1P82279 1406 aa29.11■■■□□ 2.25
CHRD-215ENST00000485883 AXIN2Q9Y2T1 843 aa29.11■■■□□ 2.25
CHRD-215ENST00000485883 TTC21BQ7Z4L5 1316 aa29.11■■■□□ 2.25
CHRD-215ENST00000485883 ZNF692Q9BU19 519 aaPredicted RBP29.08■■■□□ 2.25
CHRD-215ENST00000485883 SOX12O15370 315 aa29.07■■■□□ 2.24
CHRD-215ENST00000485883 TOM1L2Q6ZVM7 507 aa29.07■■■□□ 2.24
CHRD-215ENST00000485883 PARD3Q8TEW0 1356 aa29.07■■■□□ 2.24
CHRD-215ENST00000485883 COL18A1P39060 1754 aa29.06■■■□□ 2.24
CHRD-215ENST00000485883 PARP4Q9UKK3 1724 aaKnown RBP29.06■■■□□ 2.24
CHRD-215ENST00000485883 ARHGEF25Q86VW2 580 aa29.05■■■□□ 2.24
CHRD-215ENST00000485883 CPSF1Q10570 1443 aaKnown RBP29.03■■■□□ 2.24
CHRD-215ENST00000485883 WDR17Q8IZU2 1322 aa29.02■■■□□ 2.24
CHRD-215ENST00000485883 AKAP12Q02952 1782 aa29.01■■■□□ 2.23
CHRD-215ENST00000485883 DDB1Q16531 1140 aa29.01■■■□□ 2.23
CHRD-215ENST00000485883 KCNH5Q8NCM2 988 aa29.01■■■□□ 2.23
CHRD-215ENST00000485883 RREB1Q92766 1687 aa29.01■■■□□ 2.23
CHRD-215ENST00000485883 TTC21AQ8NDW8 1320 aa29■■■□□ 2.23
CHRD-215ENST00000485883 KTN1Q86UP2 1357 aaKnown RBP29■■■□□ 2.23
CHRD-215ENST00000485883 LRRC37A3O60309 1634 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms