RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 LAMC3Q9Y6N6 1575 aa6.41□□□□□ -1.38
SMARCC1-206ENST00000485737 KDM6BO15054 1643 aa6.41□□□□□ -1.38
SMARCC1-206ENST00000485737 NESP48681 1621 aa6.41□□□□□ -1.38
SMARCC1-206ENST00000485737 HSPA5P11021 654 aaKnown RBP6.41□□□□□ -1.38
SMARCC1-206ENST00000485737 HIRIP3Q9BW71 556 aaPredicted RBP6.41□□□□□ -1.38
SMARCC1-206ENST00000485737 SMG6Q86US8 1419 aaKnown RBP6.41□□□□□ -1.38
SMARCC1-206ENST00000485737 WDR62O43379 1518 aa6.4□□□□□ -1.38
SMARCC1-206ENST00000485737 NRG2O14511 850 aaPredicted RBP6.4□□□□□ -1.38
SMARCC1-206ENST00000485737 ACTN4O43707 911 aaKnown RBP6.4□□□□□ -1.38
SMARCC1-206ENST00000485737 EIF4G2P78344 907 aaKnown RBP eCLIP6.4□□□□□ -1.38
SMARCC1-206ENST00000485737 MDM2Q00987 491 aaPredicted RBP6.4□□□□□ -1.38
SMARCC1-206ENST00000485737 ERICH6Q7L0X2 663 aa6.4□□□□□ -1.38
SMARCC1-206ENST00000485737 SULF1Q8IWU6 871 aa6.4□□□□□ -1.38
SMARCC1-206ENST00000485737 NKX2-3Q8TAU0 364 aa6.4□□□□□ -1.38
SMARCC1-206ENST00000485737 V9GY48 417 aaPredicted RBP6.4□□□□□ -1.38
SMARCC1-206ENST00000485737 RNF123Q5XPI4 1314 aa6.4□□□□□ -1.39
SMARCC1-206ENST00000485737 URB2Q14146 1524 aaKnown RBP6.4□□□□□ -1.39
SMARCC1-206ENST00000485737 DNMT1P26358 1616 aaKnown RBP6.39□□□□□ -1.39
SMARCC1-206ENST00000485737 PUS10Q3MIT2 529 aaKnown RBP6.39□□□□□ -1.39
SMARCC1-206ENST00000485737 ZC3H15Q8WU90 426 aaKnown RBP6.39□□□□□ -1.39
SMARCC1-206ENST00000485737 PRKRIP1Q9H875 184 aaPredicted RBP6.39□□□□□ -1.39
SMARCC1-206ENST00000485737 GAPVD1Q14C86 1478 aa6.39□□□□□ -1.39
SMARCC1-206ENST00000485737 EPRSP07814 1512 aaKnown RBP6.39□□□□□ -1.39
SMARCC1-206ENST00000485737 ZPR1O75312 459 aa6.38□□□□□ -1.39
SMARCC1-206ENST00000485737 GGCXP38435 758 aa6.38□□□□□ -1.39
SMARCC1-206ENST00000485737 TRAF7Q6Q0C0 670 aa6.38□□□□□ -1.39
SMARCC1-206ENST00000485737 ANKRD30BQ9BXX2 1392 aa6.38□□□□□ -1.39
SMARCC1-206ENST00000485737 KIF14Q15058 1648 aa6.38□□□□□ -1.39
SMARCC1-206ENST00000485737 IQGAP2Q13576 1575 aa6.37□□□□□ -1.39
SMARCC1-206ENST00000485737 TLL1O43897 1013 aa6.37□□□□□ -1.39
SMARCC1-206ENST00000485737 PPP1R18Q6NYC8 613 aa6.37□□□□□ -1.39
SMARCC1-206ENST00000485737 TARBP1Q13395 1621 aaKnown RBP6.36□□□□□ -1.39
SMARCC1-206ENST00000485737 ADAMTS12P58397 1594 aa6.36□□□□□ -1.39
SMARCC1-206ENST00000485737 DAPK1P53355 1430 aa6.36□□□□□ -1.39
SMARCC1-206ENST00000485737 DHX29Q7Z478 1369 aaKnown RBP6.36□□□□□ -1.39
SMARCC1-206ENST00000485737 NR1I2O75469 434 aa6.36□□□□□ -1.39
SMARCC1-206ENST00000485737 ZMYND10O75800 440 aa6.36□□□□□ -1.39
SMARCC1-206ENST00000485737 FUT2Q10981 343 aa6.36□□□□□ -1.39
SMARCC1-206ENST00000485737 BARGINQ6ZT62 677 aa6.36□□□□□ -1.39
SMARCC1-206ENST00000485737 KIF7Q2M1P5 1343 aa6.35□□□□□ -1.39
SMARCC1-206ENST00000485737 ARID4BQ4LE39 1312 aaPredicted RBP6.35□□□□□ -1.39
SMARCC1-206ENST00000485737 CLCN1P35523 988 aa6.35□□□□□ -1.39
SMARCC1-206ENST00000485737 IRX6P78412 446 aaPredicted RBP6.35□□□□□ -1.39
SMARCC1-206ENST00000485737 TTLL12Q14166 644 aaPredicted RBP6.35□□□□□ -1.39
SMARCC1-206ENST00000485737 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.35□□□□□ -1.39
SMARCC1-206ENST00000485737 NOP58Q9Y2X3 529 aaKnown RBP6.35□□□□□ -1.39
SMARCC1-206ENST00000485737 ADGBQ8N7X0 1667 aa6.35□□□□□ -1.39
SMARCC1-206ENST00000485737 KDM5CP41229 1560 aa6.35□□□□□ -1.39
SMARCC1-206ENST00000485737 ARHGEF12Q9NZN5 1544 aa6.35□□□□□ -1.39
SMARCC1-206ENST00000485737 ADGRL2O95490 1459 aa6.34□□□□□ -1.39
SMARCC1-206ENST00000485737 PZPP20742 1482 aa6.34□□□□□ -1.39
SMARCC1-206ENST00000485737 UHRF1BP1Q6BDS2 1440 aa6.34□□□□□ -1.39
SMARCC1-206ENST00000485737 PBRM1Q86U86 1689 aa6.34□□□□□ -1.39
SMARCC1-206ENST00000485737 GFRA3O60609 400 aa6.34□□□□□ -1.39
SMARCC1-206ENST00000485737 GCGRP47871 477 aa6.34□□□□□ -1.39
SMARCC1-206ENST00000485737 CCDC184Q52MB2 194 aa6.34□□□□□ -1.39
SMARCC1-206ENST00000485737 SCUBE3Q8IX30 993 aa6.34□□□□□ -1.39
SMARCC1-206ENST00000485737 L3MBTL2Q969R5 705 aa6.34□□□□□ -1.39
SMARCC1-206ENST00000485737 MPHOSPH9Q99550 1183 aa6.34□□□□□ -1.39
SMARCC1-206ENST00000485737 MRS2Q9HD23 443 aa6.34□□□□□ -1.39
SMARCC1-206ENST00000485737 GPCPD1Q9NPB8 672 aa6.34□□□□□ -1.39
SMARCC1-206ENST00000485737 ATP1B4Q9UN42 357 aaPredicted RBP6.34□□□□□ -1.39
SMARCC1-206ENST00000485737 CDK13Q14004 1512 aaKnown RBP6.34□□□□□ -1.39
SMARCC1-206ENST00000485737 RALGAPBQ86X10 1494 aa6.34□□□□□ -1.4
SMARCC1-206ENST00000485737 ABCC5O15440 1437 aa6.33□□□□□ -1.4
SMARCC1-206ENST00000485737 ROCK2O75116 1388 aaKnown RBP6.33□□□□□ -1.4
SMARCC1-206ENST00000485737 KTN1Q86UP2 1357 aaKnown RBP6.33□□□□□ -1.4
SMARCC1-206ENST00000485737 E9PCH4 1651 aa6.33□□□□□ -1.4
SMARCC1-206ENST00000485737 CROCC2H7BZ55 1655 aa6.33□□□□□ -1.4
SMARCC1-206ENST00000485737 C11orf95C9JLR9 678 aaPredicted RBP6.33□□□□□ -1.4
SMARCC1-206ENST00000485737 CD46P15529 392 aa6.33□□□□□ -1.4
SMARCC1-206ENST00000485737 DEKP35659 375 aaKnown RBP6.33□□□□□ -1.4
SMARCC1-206ENST00000485737 ATP6V1AP38606 617 aa6.33□□□□□ -1.4
SMARCC1-206ENST00000485737 NUDCQ9Y266 331 aa6.33□□□□□ -1.4
SMARCC1-206ENST00000485737 ZMYM4Q5VZL5 1548 aa6.33□□□□□ -1.4
SMARCC1-206ENST00000485737 ADCY10Q96PN6 1610 aa6.32□□□□□ -1.4
SMARCC1-206ENST00000485737 KDM5DQ9BY66 1539 aa6.32□□□□□ -1.4
SMARCC1-206ENST00000485737 S1PR4O95977 384 aa6.32□□□□□ -1.4
SMARCC1-206ENST00000485737 B4GALNT3Q6L9W6 998 aa6.32□□□□□ -1.4
SMARCC1-206ENST00000485737 BCORL1Q5H9F3 1711 aa6.32□□□□□ -1.4
SMARCC1-206ENST00000485737 ITSN2Q9NZM3 1697 aa6.32□□□□□ -1.4
SMARCC1-206ENST00000485737 KIAA0556O60303 1618 aa6.32□□□□□ -1.4
SMARCC1-206ENST00000485737 INSRP06213 1382 aa6.31□□□□□ -1.4
SMARCC1-206ENST00000485737 LRPPRCP42704 1394 aaKnown RBP6.31□□□□□ -1.4
SMARCC1-206ENST00000485737 SHANK2Q9UPX8 1470 aa6.31□□□□□ -1.4
SMARCC1-206ENST00000485737 ADH1BP00325 375 aa6.31□□□□□ -1.4
SMARCC1-206ENST00000485737 NBPF8Q3BBV2 869 aa6.31□□□□□ -1.4
SMARCC1-206ENST00000485737 GRIPAP1Q4V328 841 aa6.31□□□□□ -1.4
SMARCC1-206ENST00000485737 MORN1Q5T089 497 aa6.31□□□□□ -1.4
SMARCC1-206ENST00000485737 SPSB2Q99619 263 aa6.31□□□□□ -1.4
SMARCC1-206ENST00000485737 TMUB1Q9BVT8 246 aa6.31□□□□□ -1.4
SMARCC1-206ENST00000485737 PRKD2Q9BZL6 878 aa6.31□□□□□ -1.4
SMARCC1-206ENST00000485737 RRP7BPQ9NSQ0 103 aa6.31□□□□□ -1.4
SMARCC1-206ENST00000485737 KIAA1107Q9UPP5 1409 aa6.31□□□□□ -1.4
SMARCC1-206ENST00000485737 TDRD9Q8NDG6 1382 aaKnown RBP6.31□□□□□ -1.4
SMARCC1-206ENST00000485737 USP47Q96K76 1375 aa6.31□□□□□ -1.4
SMARCC1-206ENST00000485737 NUP153P49790 1475 aaKnown RBP6.3□□□□□ -1.4
SMARCC1-206ENST00000485737 PPEF1O14829 653 aaPredicted RBP6.3□□□□□ -1.4
SMARCC1-206ENST00000485737 KDM4AO75164 1064 aa6.3□□□□□ -1.4
SMARCC1-206ENST00000485737 REPIN1Q9BWE0 567 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms