RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 RGPD8O14715 1765 aaPredicted RBP18.32■□□□□ 0.52
SSR4-210ENST00000485612 SPATA31A1Q5TZJ5 1347 aa18.31■□□□□ 0.52
SSR4-210ENST00000485612 RGL3Q3MIN7 710 aa18.3■□□□□ 0.52
SSR4-210ENST00000485612 YTHDC2Q9H6S0 1430 aaKnown RBP18.3■□□□□ 0.52
SSR4-210ENST00000485612 PRDM11Q9NQV5 511 aa18.29■□□□□ 0.52
SSR4-210ENST00000485612 KNDC1Q76NI1 1749 aa18.29■□□□□ 0.52
SSR4-210ENST00000485612 PDE3BQ13370 1112 aa18.28■□□□□ 0.52
SSR4-210ENST00000485612 SLC4A1APQ9BWU0 796 aaKnown RBP18.28■□□□□ 0.52
SSR4-210ENST00000485612 RREB1Q92766 1687 aa18.27■□□□□ 0.52
SSR4-210ENST00000485612 SAFB2Q14151 953 aaKnown RBP eCLIP18.26■□□□□ 0.51
SSR4-210ENST00000485612 ANKRD30BQ9BXX2 1392 aa18.26■□□□□ 0.51
SSR4-210ENST00000485612 NUP188Q5SRE5 1749 aa18.26■□□□□ 0.51
SSR4-210ENST00000485612 STRN4Q9NRL3 753 aa18.25■□□□□ 0.51
SSR4-210ENST00000485612 GPRASP1Q5JY77 1395 aa18.25■□□□□ 0.51
SSR4-210ENST00000485612 CAMTA1Q9Y6Y1 1673 aa18.25■□□□□ 0.51
SSR4-210ENST00000485612 C1QTNF8P60827 252 aa18.24■□□□□ 0.51
SSR4-210ENST00000485612 USP35Q9P2H5 1018 aa18.24■□□□□ 0.51
SSR4-210ENST00000485612 PRAM1Q96QH2 718 aa18.23■□□□□ 0.51
SSR4-210ENST00000485612 BARGINQ6ZT62 677 aa18.22■□□□□ 0.51
SSR4-210ENST00000485612 PIK3C2GO75747 1445 aa18.22■□□□□ 0.51
SSR4-210ENST00000485612 ANKARQ7Z5J8 1434 aa18.22■□□□□ 0.51
SSR4-210ENST00000485612 TRPM3Q9HCF6 1732 aaPredicted RBP18.21■□□□□ 0.51
SSR4-210ENST00000485612 PAK3O75914 559 aaPredicted RBP18.21■□□□□ 0.51
SSR4-210ENST00000485612 CHRNA2Q15822 529 aa18.21■□□□□ 0.51
SSR4-210ENST00000485612 C14orf93Q9H972 538 aaKnown RBP18.21■□□□□ 0.51
SSR4-210ENST00000485612 ACIN1Q9UKV3 1341 aaKnown RBP18.21■□□□□ 0.51
SSR4-210ENST00000485612 DHX57Q6P158 1386 aaKnown RBP18.2■□□□□ 0.5
SSR4-210ENST00000485612 EVA1CP58658 441 aa18.2■□□□□ 0.5
SSR4-210ENST00000485612 POGKQ9P215 609 aa18.2■□□□□ 0.5
SSR4-210ENST00000485612 KIAA0232Q92628 1395 aa18.19■□□□□ 0.5
SSR4-210ENST00000485612 ALS2Q96Q42 1657 aa18.19■□□□□ 0.5
SSR4-210ENST00000485612 SPATA31E1Q6ZUB1 1445 aa18.18■□□□□ 0.5
SSR4-210ENST00000485612 NGDNQ8NEJ9 315 aaKnown RBP18.17■□□□□ 0.5
SSR4-210ENST00000485612 UTRNP46939 3433 aa18.17■□□□□ 0.5
SSR4-210ENST00000485612 ZC3H6P61129 1189 aaKnown RBP18.16■□□□□ 0.5
SSR4-210ENST00000485612 CFAP70Q5T0N1 1121 aa18.16■□□□□ 0.5
SSR4-210ENST00000485612 ZBTB7AO95365 584 aa18.15■□□□□ 0.5
SSR4-210ENST00000485612 TCP11L2Q8N4U5 519 aa18.15■□□□□ 0.5
SSR4-210ENST00000485612 C11orf95C9JLR9 678 aaPredicted RBP18.14■□□□□ 0.49
SSR4-210ENST00000485612 HIRIP3Q9BW71 556 aaPredicted RBP18.14■□□□□ 0.49
SSR4-210ENST00000485612 PDGFDQ9GZP0 370 aaPredicted RBP18.14■□□□□ 0.49
SSR4-210ENST00000485612 PRR36Q9H6K5 1346 aa18.14■□□□□ 0.49
SSR4-210ENST00000485612 NRKQ7Z2Y5 1582 aa18.13■□□□□ 0.49
SSR4-210ENST00000485612 CRYBG1Q9Y4K1 1723 aa18.13■□□□□ 0.49
SSR4-210ENST00000485612 PLSCR1O15162 318 aa18.13■□□□□ 0.49
SSR4-210ENST00000485612 PTGER2P43116 358 aa18.13■□□□□ 0.49
SSR4-210ENST00000485612 LARP1Q6PKG0 1096 aaKnown RBP18.13■□□□□ 0.49
SSR4-210ENST00000485612 SYT17Q9BSW7 474 aa18.13■□□□□ 0.49
SSR4-210ENST00000485612 ANO8Q9HCE9 1232 aaPredicted RBP18.13■□□□□ 0.49
SSR4-210ENST00000485612 ATF5Q9Y2D1 282 aaPredicted RBP18.13■□□□□ 0.49
SSR4-210ENST00000485612 SSH2Q76I76 1423 aa18.13■□□□□ 0.49
SSR4-210ENST00000485612 FHDC1Q9C0D6 1143 aaPredicted RBP18.12■□□□□ 0.49
SSR4-210ENST00000485612 MPHOSPH9Q99550 1183 aa18.11■□□□□ 0.49
SSR4-210ENST00000485612 THRAP3Q9Y2W1 955 aaKnown RBP18.11■□□□□ 0.49
SSR4-210ENST00000485612 EIF3AQ14152 1382 aaKnown RBP18.11■□□□□ 0.49
SSR4-210ENST00000485612 NUTM2GQ5VZR2 741 aa18.1■□□□□ 0.49
SSR4-210ENST00000485612 BCL11BQ9C0K0 894 aaPredicted RBP18.1■□□□□ 0.49
SSR4-210ENST00000485612 MINK1Q8N4C8 1332 aaPredicted RBP18.09■□□□□ 0.49
SSR4-210ENST00000485612 WASLO00401 505 aaPredicted RBP18.08■□□□□ 0.48
SSR4-210ENST00000485612 CASZ1Q86V15 1759 aa18.08■□□□□ 0.48
SSR4-210ENST00000485612 DLC1Q96QB1 1528 aa18.08■□□□□ 0.48
SSR4-210ENST00000485612 MYOM1P52179 1685 aa18.07■□□□□ 0.48
SSR4-210ENST00000485612 GIGYF1O75420 1035 aaPredicted RBP18.06■□□□□ 0.48
SSR4-210ENST00000485612 PROM2Q8N271 834 aa18.06■□□□□ 0.48
SSR4-210ENST00000485612 TRAK1Q9UPV9 953 aa18.06■□□□□ 0.48
SSR4-210ENST00000485612 TULP4Q9NRJ4 1543 aa18.06■□□□□ 0.48
SSR4-210ENST00000485612 OVOS2A0A0G2JMS6 1433 aa18.05■□□□□ 0.48
SSR4-210ENST00000485612 OVOS2A0A0J9YW53 1432 aa18.05■□□□□ 0.48
SSR4-210ENST00000485612 OVOS2Q6IE36 1432 aa18.05■□□□□ 0.48
SSR4-210ENST00000485612 STK32BQ9NY57 414 aa18.04■□□□□ 0.48
SSR4-210ENST00000485612 PHRF1Q9P1Y6 1649 aaKnown RBP18.03■□□□□ 0.48
SSR4-210ENST00000485612 PTF1AQ7RTS3 328 aa18.03■□□□□ 0.48
SSR4-210ENST00000485612 MTFR1LQ9H019 292 aa18.03■□□□□ 0.48
SSR4-210ENST00000485612 CHD4Q14839 1912 aa18.03■□□□□ 0.48
SSR4-210ENST00000485612 RGPD3A6NKT7 1758 aaPredicted RBP18.02■□□□□ 0.48
SSR4-210ENST00000485612 RGPD4Q7Z3J3 1758 aa18.02■□□□□ 0.48
SSR4-210ENST00000485612 ATP7BP35670 1465 aa18.01■□□□□ 0.47
SSR4-210ENST00000485612 SLC15A2Q16348 729 aa18.01■□□□□ 0.47
SSR4-210ENST00000485612 DDB1Q16531 1140 aa18.01■□□□□ 0.47
SSR4-210ENST00000485612 NUDT16Q96DE0 195 aaKnown RBP18.01■□□□□ 0.47
SSR4-210ENST00000485612 GPR162Q16538 588 aa18■□□□□ 0.47
SSR4-210ENST00000485612 SGIP1Q9BQI5 828 aa18■□□□□ 0.47
SSR4-210ENST00000485612 CPDO75976 1380 aa18■□□□□ 0.47
SSR4-210ENST00000485612 PARP4Q9UKK3 1724 aaKnown RBP18■□□□□ 0.47
SSR4-210ENST00000485612 TXNRD1Q16881 649 aa17.99■□□□□ 0.47
SSR4-210ENST00000485612 ABTB2Q8N961 1025 aa17.99■□□□□ 0.47
SSR4-210ENST00000485612 ARXQ96QS3 562 aa17.99■□□□□ 0.47
SSR4-210ENST00000485612 PEAK1Q9H792 1746 aa17.98■□□□□ 0.47
SSR4-210ENST00000485612 RAB3GAP2Q9H2M9 1393 aa17.97■□□□□ 0.47
SSR4-210ENST00000485612 CRB1P82279 1406 aa17.97■□□□□ 0.47
SSR4-210ENST00000485612 CEP350Q5VT06 3117 aa17.96■□□□□ 0.47
SSR4-210ENST00000485612 LMO7Q8WWI1 1683 aa17.96■□□□□ 0.47
SSR4-210ENST00000485612 ACEP12821 1306 aa17.96■□□□□ 0.46
SSR4-210ENST00000485612 ADGRB1O14514 1584 aa17.96■□□□□ 0.46
SSR4-210ENST00000485612 COL5A2P05997 1499 aaPredicted RBP17.95■□□□□ 0.46
SSR4-210ENST00000485612 GCP02774 474 aa17.95■□□□□ 0.46
SSR4-210ENST00000485612 MARCH10Q8NA82 808 aaPredicted RBP17.95■□□□□ 0.46
SSR4-210ENST00000485612 SBF2Q86WG5 1849 aa17.95■□□□□ 0.46
SSR4-210ENST00000485612 NLRP13Q86W25 1043 aa17.94■□□□□ 0.46
SSR4-210ENST00000485612 ARHGEF28Q8N1W1 1705 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms