RNA–Protein interactions for RNA: ENST00000484979.5

PCDH17-202, Transcript of protocadherin 17, humanhuman

TSL 1 (best)

Gene PCDH17, Length 4,471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-202ENST00000484979 VPS37CA5D8V6 355 aaPredicted RBP19.29■□□□□ 0.68
PCDH17-202ENST00000484979 ANO8Q9HCE9 1232 aaPredicted RBP19.29■□□□□ 0.68
PCDH17-202ENST00000484979 SART3Q15020 963 aaKnown RBP19.29■□□□□ 0.68
PCDH17-202ENST00000484979 KCNH5Q8NCM2 988 aa19.29■□□□□ 0.68
PCDH17-202ENST00000484979 BICD2Q8TD16 824 aa19.29■□□□□ 0.68
PCDH17-202ENST00000484979 CDC45O75419 566 aa19.28■□□□□ 0.68
PCDH17-202ENST00000484979 IPO7O95373 1038 aaKnown RBP19.28■□□□□ 0.68
PCDH17-202ENST00000484979 SLC4A2P04920 1241 aa19.28■□□□□ 0.68
PCDH17-202ENST00000484979 NUCB2P80303 420 aa19.28■□□□□ 0.68
PCDH17-202ENST00000484979 CHMP5Q9NZZ3 219 aa19.28■□□□□ 0.68
PCDH17-202ENST00000484979 NINLQ9Y2I6 1382 aa19.28■□□□□ 0.68
PCDH17-202ENST00000484979 GNAI2P04899 355 aa19.28■□□□□ 0.68
PCDH17-202ENST00000484979 CT47B1P0C2W7 299 aaPredicted RBP19.28■□□□□ 0.68
PCDH17-202ENST00000484979 PDE3AQ14432 1141 aa19.27■□□□□ 0.68
PCDH17-202ENST00000484979 PSMA5P28066 241 aa19.27■□□□□ 0.68
PCDH17-202ENST00000484979 HECW1Q76N89 1606 aa19.27■□□□□ 0.68
PCDH17-202ENST00000484979 XBP1P17861 261 aa19.27■□□□□ 0.68
PCDH17-202ENST00000484979 NUDT16Q96DE0 195 aaKnown RBP19.27■□□□□ 0.68
PCDH17-202ENST00000484979 GNL3LQ9NVN8 582 aaKnown RBP19.27■□□□□ 0.68
PCDH17-202ENST00000484979 DAPK1P53355 1430 aa19.26■□□□□ 0.67
PCDH17-202ENST00000484979 HIP1O00291 1037 aa19.26■□□□□ 0.67
PCDH17-202ENST00000484979 SRCIN1Q9C0H9 1055 aa19.26■□□□□ 0.67
PCDH17-202ENST00000484979 CNNM1Q9NRU3 951 aa19.25■□□□□ 0.67
PCDH17-202ENST00000484979 CCT4P50991 539 aaKnown RBP19.25■□□□□ 0.67
PCDH17-202ENST00000484979 PDE4CQ08493 712 aa19.25■□□□□ 0.67
PCDH17-202ENST00000484979 SAMD1Q6SPF0 538 aaPredicted RBP19.25■□□□□ 0.67
PCDH17-202ENST00000484979 FYB1O15117 783 aa19.25■□□□□ 0.67
PCDH17-202ENST00000484979 SLC4A3P48751 1232 aa19.25■□□□□ 0.67
PCDH17-202ENST00000484979 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.25■□□□□ 0.67
PCDH17-202ENST00000484979 C22orf23Q9BZE7 217 aa19.25■□□□□ 0.67
PCDH17-202ENST00000484979 ZC3H6P61129 1189 aaKnown RBP19.24■□□□□ 0.67
PCDH17-202ENST00000484979 WDR63Q8IWG1 891 aa19.24■□□□□ 0.67
PCDH17-202ENST00000484979 PRM3Q9NNZ6 103 aa19.24■□□□□ 0.67
PCDH17-202ENST00000484979 FCHSD2O94868 740 aa19.24■□□□□ 0.67
PCDH17-202ENST00000484979 CDCA7LQ96GN5 454 aa19.24■□□□□ 0.67
PCDH17-202ENST00000484979 BRMS1Q9HCU9 246 aa19.24■□□□□ 0.67
PCDH17-202ENST00000484979 ABCA10Q8WWZ4 1543 aa19.24■□□□□ 0.67
PCDH17-202ENST00000484979 CCDC73Q6ZRK6 1079 aa19.23■□□□□ 0.67
PCDH17-202ENST00000484979 ZNF428Q96B54 188 aa19.23■□□□□ 0.67
PCDH17-202ENST00000484979 A0A0U1RQG5 324 aaPredicted RBP19.23■□□□□ 0.67
PCDH17-202ENST00000484979 CCDC158Q5M9N0 1113 aa19.23■□□□□ 0.67
PCDH17-202ENST00000484979 EPRSP07814 1512 aaKnown RBP19.23■□□□□ 0.67
PCDH17-202ENST00000484979 SLC3A2P08195 630 aaKnown RBP19.22■□□□□ 0.67
PCDH17-202ENST00000484979 PIP4K2BP78356 416 aa19.22■□□□□ 0.67
PCDH17-202ENST00000484979 GCC1Q96CN9 775 aa19.22■□□□□ 0.67
PCDH17-202ENST00000484979 IKQ13123 557 aaPredicted RBP19.21■□□□□ 0.67
PCDH17-202ENST00000484979 CCDC141Q6ZP82 1450 aa19.21■□□□□ 0.67
PCDH17-202ENST00000484979 MPHOSPH8Q99549 860 aa19.21■□□□□ 0.67
PCDH17-202ENST00000484979 MAGI1Q96QZ7 1491 aaPredicted RBP19.21■□□□□ 0.67
PCDH17-202ENST00000484979 GOLGA6L1Q8N7Z2 621 aa19.21■□□□□ 0.67
PCDH17-202ENST00000484979 TSR2Q969E8 191 aaKnown RBP19.21■□□□□ 0.67
PCDH17-202ENST00000484979 DNAJC5BQ9UF47 199 aa19.21■□□□□ 0.67
PCDH17-202ENST00000484979 DNAJC2Q99543 621 aaKnown RBP19.2■□□□□ 0.66
PCDH17-202ENST00000484979 XPCQ01831 940 aaPredicted RBP19.19■□□□□ 0.66
PCDH17-202ENST00000484979 RRS1Q15050 365 aaKnown RBP19.19■□□□□ 0.66
PCDH17-202ENST00000484979 PCMTD1Q96MG8 357 aaPredicted RBP19.19■□□□□ 0.66
PCDH17-202ENST00000484979 LAMC3Q9Y6N6 1575 aa19.19■□□□□ 0.66
PCDH17-202ENST00000484979 CCDC57Q2TAC2 916 aa19.19■□□□□ 0.66
PCDH17-202ENST00000484979 PPP6R1Q9UPN7 881 aa19.18■□□□□ 0.66
PCDH17-202ENST00000484979 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.18■□□□□ 0.66
PCDH17-202ENST00000484979 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.18■□□□□ 0.66
PCDH17-202ENST00000484979 PPP1R1BQ9UD71 204 aaPredicted RBP19.18■□□□□ 0.66
PCDH17-202ENST00000484979 PDCP20941 246 aa19.17■□□□□ 0.66
PCDH17-202ENST00000484979 CEP126Q9P2H0 1117 aa19.17■□□□□ 0.66
PCDH17-202ENST00000484979 MCM2P49736 904 aa19.16■□□□□ 0.66
PCDH17-202ENST00000484979 ATF7IPQ6VMQ6 1270 aa19.16■□□□□ 0.66
PCDH17-202ENST00000484979 R3HCC1Q9Y3T6 440 aaKnown RBP19.16■□□□□ 0.66
PCDH17-202ENST00000484979 TIAM1Q13009 1591 aa19.16■□□□□ 0.66
PCDH17-202ENST00000484979 ARHGEF11O15085 1522 aa19.16■□□□□ 0.66
PCDH17-202ENST00000484979 NACAP1Q9BZK3 213 aa19.15■□□□□ 0.66
PCDH17-202ENST00000484979 STARD3NLO95772 234 aa19.15■□□□□ 0.66
PCDH17-202ENST00000484979 NOB1Q9ULX3 412 aaKnown RBP19.15■□□□□ 0.66
PCDH17-202ENST00000484979 IQGAP2Q13576 1575 aa19.15■□□□□ 0.66
PCDH17-202ENST00000484979 BTBD11A6QL63 1104 aa19.15■□□□□ 0.66
PCDH17-202ENST00000484979 MYL6BP14649 208 aa19.15■□□□□ 0.66
PCDH17-202ENST00000484979 IDI1Q13907 227 aa19.14■□□□□ 0.66
PCDH17-202ENST00000484979 SASS6Q6UVJ0 657 aa19.14■□□□□ 0.66
PCDH17-202ENST00000484979 WAPLQ7Z5K2 1190 aa19.14■□□□□ 0.66
PCDH17-202ENST00000484979 PHF8Q9UPP1 1060 aa19.14■□□□□ 0.66
PCDH17-202ENST00000484979 TTC39AQ5SRH9 613 aa19.14■□□□□ 0.65
PCDH17-202ENST00000484979 MTMR7Q9Y216 660 aa19.14■□□□□ 0.65
PCDH17-202ENST00000484979 ADGRL1O94910 1474 aa19.14■□□□□ 0.65
PCDH17-202ENST00000484979 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.14■□□□□ 0.65
PCDH17-202ENST00000484979 NFE2L2Q16236 605 aa19.14■□□□□ 0.65
PCDH17-202ENST00000484979 DMRT2Q9Y5R5 561 aa19.13■□□□□ 0.65
PCDH17-202ENST00000484979 CCAR1Q8IX12 1150 aaKnown RBP19.13■□□□□ 0.65
PCDH17-202ENST00000484979 SDF4Q9BRK5 362 aa19.13■□□□□ 0.65
PCDH17-202ENST00000484979 AMOTL2Q9Y2J4 779 aa19.13■□□□□ 0.65
PCDH17-202ENST00000484979 CDK13Q14004 1512 aaKnown RBP19.13■□□□□ 0.65
PCDH17-202ENST00000484979 FOXO3O43524 673 aa19.13■□□□□ 0.65
PCDH17-202ENST00000484979 CCDC70Q6NSX1 233 aa19.13■□□□□ 0.65
PCDH17-202ENST00000484979 NEK4P51957 841 aa19.12■□□□□ 0.65
PCDH17-202ENST00000484979 LRRCC1Q9C099 1032 aa19.12■□□□□ 0.65
PCDH17-202ENST00000484979 NAIPQ13075 1403 aa19.12■□□□□ 0.65
PCDH17-202ENST00000484979 GNAT3A8MTJ3 354 aa19.12■□□□□ 0.65
PCDH17-202ENST00000484979 PDZRN3Q9UPQ7 1066 aa19.12■□□□□ 0.65
PCDH17-202ENST00000484979 PLB1Q6P1J6 1458 aa19.11■□□□□ 0.65
PCDH17-202ENST00000484979 RRP12Q5JTH9 1297 aaKnown RBP19.11■□□□□ 0.65
PCDH17-202ENST00000484979 ZSCAN25Q6NSZ9 544 aa19.11■□□□□ 0.65
PCDH17-202ENST00000484979 SUPT6HQ7KZ85 1726 aaKnown RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms