RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 PRR36Q9H6K5 1346 aa22.65■■□□□ 1.22
HLA-DQB1-208ENST00000484729 ACIN1Q9UKV3 1341 aaKnown RBP22.65■■□□□ 1.22
HLA-DQB1-208ENST00000484729 MINK1Q8N4C8 1332 aaPredicted RBP22.64■■□□□ 1.22
HLA-DQB1-208ENST00000484729 TNS1Q9HBL0 1735 aaKnown RBP22.64■■□□□ 1.21
HLA-DQB1-208ENST00000484729 DLC1Q96QB1 1528 aa22.63■■□□□ 1.21
HLA-DQB1-208ENST00000484729 THSD7AQ9UPZ6 1657 aa22.63■■□□□ 1.21
HLA-DQB1-208ENST00000484729 PAK3O75914 559 aaPredicted RBP22.63■■□□□ 1.21
HLA-DQB1-208ENST00000484729 PRDM11Q9NQV5 511 aa22.63■■□□□ 1.21
HLA-DQB1-208ENST00000484729 TRAK1Q9UPV9 953 aa22.63■■□□□ 1.21
HLA-DQB1-208ENST00000484729 DISP2A7MBM2 1401 aa22.63■■□□□ 1.21
HLA-DQB1-208ENST00000484729 ADGRB2O60241 1585 aa22.63■■□□□ 1.21
HLA-DQB1-208ENST00000484729 TRIM37O94972 964 aa22.62■■□□□ 1.21
HLA-DQB1-208ENST00000484729 CAMKK2Q96RR4 588 aa22.61■■□□□ 1.21
HLA-DQB1-208ENST00000484729 CHRNA2Q15822 529 aa22.6■■□□□ 1.21
HLA-DQB1-208ENST00000484729 NGDNQ8NEJ9 315 aaKnown RBP22.6■■□□□ 1.21
HLA-DQB1-208ENST00000484729 RAB3GAP2Q9H2M9 1393 aa22.6■■□□□ 1.21
HLA-DQB1-208ENST00000484729 CRYBG1Q9Y4K1 1723 aa22.6■■□□□ 1.21
HLA-DQB1-208ENST00000484729 STRN4Q9NRL3 753 aa22.59■■□□□ 1.21
HLA-DQB1-208ENST00000484729 SPATA31A1Q5TZJ5 1347 aa22.58■■□□□ 1.21
HLA-DQB1-208ENST00000484729 ADGRB1O14514 1584 aa22.58■■□□□ 1.2
HLA-DQB1-208ENST00000484729 TULP4Q9NRJ4 1543 aa22.57■■□□□ 1.2
HLA-DQB1-208ENST00000484729 WASLO00401 505 aaPredicted RBP22.57■■□□□ 1.2
HLA-DQB1-208ENST00000484729 APBA3O96018 575 aa22.57■■□□□ 1.2
HLA-DQB1-208ENST00000484729 FAM196AQ6ZSG2 479 aa22.57■■□□□ 1.2
HLA-DQB1-208ENST00000484729 KIAA0232Q92628 1395 aa22.57■■□□□ 1.2
HLA-DQB1-208ENST00000484729 USP35Q9P2H5 1018 aa22.55■■□□□ 1.2
HLA-DQB1-208ENST00000484729 EIF3AQ14152 1382 aaKnown RBP22.54■■□□□ 1.2
HLA-DQB1-208ENST00000484729 ZC3H6P61129 1189 aaKnown RBP22.54■■□□□ 1.2
HLA-DQB1-208ENST00000484729 NUTM2GQ5VZR2 741 aa22.53■■□□□ 1.2
HLA-DQB1-208ENST00000484729 KDM2AQ9Y2K7 1162 aa22.52■■□□□ 1.2
HLA-DQB1-208ENST00000484729 YY1P25490 414 aa22.5■■□□□ 1.19
HLA-DQB1-208ENST00000484729 PARD3Q8TEW0 1356 aa22.49■■□□□ 1.19
HLA-DQB1-208ENST00000484729 EVA1CP58658 441 aa22.48■■□□□ 1.19
HLA-DQB1-208ENST00000484729 PDE3BQ13370 1112 aa22.48■■□□□ 1.19
HLA-DQB1-208ENST00000484729 NUDT16Q96DE0 195 aaKnown RBP22.48■■□□□ 1.19
HLA-DQB1-208ENST00000484729 PHRF1Q9P1Y6 1649 aaKnown RBP22.48■■□□□ 1.19
HLA-DQB1-208ENST00000484729 RREB1Q92766 1687 aa22.46■■□□□ 1.19
HLA-DQB1-208ENST00000484729 DCAF11Q8TEB1 546 aa22.46■■□□□ 1.19
HLA-DQB1-208ENST00000484729 ATP7BP35670 1465 aa22.46■■□□□ 1.19
HLA-DQB1-208ENST00000484729 NUP188Q5SRE5 1749 aa22.45■■□□□ 1.19
HLA-DQB1-208ENST00000484729 NBPF8Q3BBV2 869 aa22.45■■□□□ 1.18
HLA-DQB1-208ENST00000484729 NBPF14Q5TI25 921 aa22.45■■□□□ 1.18
HLA-DQB1-208ENST00000484729 LARP1Q6PKG0 1096 aaKnown RBP22.45■■□□□ 1.18
HLA-DQB1-208ENST00000484729 BARGINQ6ZT62 677 aa22.45■■□□□ 1.18
HLA-DQB1-208ENST00000484729 SSH2Q76I76 1423 aa22.45■■□□□ 1.18
HLA-DQB1-208ENST00000484729 PPP1R1BQ9UD71 204 aaPredicted RBP22.42■■□□□ 1.18
HLA-DQB1-208ENST00000484729 ITSN1Q15811 1721 aa22.42■■□□□ 1.18
HLA-DQB1-208ENST00000484729 CAMTA1Q9Y6Y1 1673 aa22.42■■□□□ 1.18
HLA-DQB1-208ENST00000484729 TCP11L2Q8N4U5 519 aa22.41■■□□□ 1.18
HLA-DQB1-208ENST00000484729 CDK19Q9BWU1 502 aa22.41■■□□□ 1.18
HLA-DQB1-208ENST00000484729 ACEP12821 1306 aa22.4■■□□□ 1.18
HLA-DQB1-208ENST00000484729 SPON1Q9HCB6 807 aa22.4■■□□□ 1.18
HLA-DQB1-208ENST00000484729 ARHGEF28Q8N1W1 1705 aaKnown RBP22.39■■□□□ 1.17
HLA-DQB1-208ENST00000484729 KCNQ2O43526 872 aa22.38■■□□□ 1.17
HLA-DQB1-208ENST00000484729 NRKQ7Z2Y5 1582 aa22.38■■□□□ 1.17
HLA-DQB1-208ENST00000484729 ABTB2Q8N961 1025 aa22.37■■□□□ 1.17
HLA-DQB1-208ENST00000484729 POLR3AO14802 1390 aaPredicted RBP22.37■■□□□ 1.17
HLA-DQB1-208ENST00000484729 LMO7Q8WWI1 1683 aa22.35■■□□□ 1.17
HLA-DQB1-208ENST00000484729 CCDC61Q9Y6R9 512 aa22.34■■□□□ 1.17
HLA-DQB1-208ENST00000484729 CPDO75976 1380 aa22.34■■□□□ 1.17
HLA-DQB1-208ENST00000484729 TOPAZ1Q8N9V7 1692 aa22.33■■□□□ 1.17
HLA-DQB1-208ENST00000484729 THRAP3Q9Y2W1 955 aaKnown RBP22.33■■□□□ 1.17
HLA-DQB1-208ENST00000484729 USP19O94966 1318 aa22.32■■□□□ 1.16
HLA-DQB1-208ENST00000484729 PLEKHG3A1L390 1219 aa22.32■■□□□ 1.16
HLA-DQB1-208ENST00000484729 DCAF8L1A6NGE4 600 aa22.32■■□□□ 1.16
HLA-DQB1-208ENST00000484729 NINLQ9Y2I6 1382 aa22.31■■□□□ 1.16
HLA-DQB1-208ENST00000484729 ZBTB7CA1YPR0 619 aa22.31■■□□□ 1.16
HLA-DQB1-208ENST00000484729 GCP02774 474 aa22.31■■□□□ 1.16
HLA-DQB1-208ENST00000484729 COL5A2P05997 1499 aaPredicted RBP22.3■■□□□ 1.16
HLA-DQB1-208ENST00000484729 PTF1AQ7RTS3 328 aa22.3■■□□□ 1.16
HLA-DQB1-208ENST00000484729 STAC3Q96MF2 364 aa22.3■■□□□ 1.16
HLA-DQB1-208ENST00000484729 ANO8Q9HCE9 1232 aaPredicted RBP22.3■■□□□ 1.16
HLA-DQB1-208ENST00000484729 PARP4Q9UKK3 1724 aaKnown RBP22.3■■□□□ 1.16
HLA-DQB1-208ENST00000484729 NLRP13Q86W25 1043 aa22.28■■□□□ 1.16
HLA-DQB1-208ENST00000484729 PDGFDQ9GZP0 370 aaPredicted RBP22.28■■□□□ 1.16
HLA-DQB1-208ENST00000484729 OVOS2A0A0G2JMS6 1433 aa22.27■■□□□ 1.16
HLA-DQB1-208ENST00000484729 OVOS2A0A0J9YW53 1432 aa22.27■■□□□ 1.16
HLA-DQB1-208ENST00000484729 OVOS2Q6IE36 1432 aa22.27■■□□□ 1.16
HLA-DQB1-208ENST00000484729 PEAK1Q9H792 1746 aa22.27■■□□□ 1.16
HLA-DQB1-208ENST00000484729 CRB1P82279 1406 aa22.26■■□□□ 1.15
HLA-DQB1-208ENST00000484729 PLSCR1O15162 318 aa22.25■■□□□ 1.15
HLA-DQB1-208ENST00000484729 C11orf95C9JLR9 678 aaPredicted RBP22.24■■□□□ 1.15
HLA-DQB1-208ENST00000484729 PPIP5K1Q6PFW1 1433 aa22.23■■□□□ 1.15
HLA-DQB1-208ENST00000484729 ZBTB7AO95365 584 aa22.23■■□□□ 1.15
HLA-DQB1-208ENST00000484729 SRPK2P78362 688 aaKnown RBP22.23■■□□□ 1.15
HLA-DQB1-208ENST00000484729 DDB1Q16531 1140 aa22.23■■□□□ 1.15
HLA-DQB1-208ENST00000484729 LRRC37A3O60309 1634 aa22.23■■□□□ 1.15
HLA-DQB1-208ENST00000484729 SBF2Q86WG5 1849 aa22.22■■□□□ 1.15
HLA-DQB1-208ENST00000484729 PROM2Q8N271 834 aa22.22■■□□□ 1.15
HLA-DQB1-208ENST00000484729 BCL11BQ9C0K0 894 aaPredicted RBP22.22■■□□□ 1.15
HLA-DQB1-208ENST00000484729 CABP2Q9NPB3 220 aa22.22■■□□□ 1.15
HLA-DQB1-208ENST00000484729 CASZ1Q86V15 1759 aa22.22■■□□□ 1.15
HLA-DQB1-208ENST00000484729 NBPF1Q3BBV0 1214 aa22.21■■□□□ 1.15
HLA-DQB1-208ENST00000484729 TOM1L2Q6ZVM7 507 aa22.21■■□□□ 1.15
HLA-DQB1-208ENST00000484729 RGPD3A6NKT7 1758 aaPredicted RBP22.2■■□□□ 1.14
HLA-DQB1-208ENST00000484729 RGPD4Q7Z3J3 1758 aa22.2■■□□□ 1.14
HLA-DQB1-208ENST00000484729 NLRP6P59044 892 aa22.2■■□□□ 1.14
HLA-DQB1-208ENST00000484729 MARCH10Q8NA82 808 aaPredicted RBP22.2■■□□□ 1.14
HLA-DQB1-208ENST00000484729 ATF5Q9Y2D1 282 aaPredicted RBP22.2■■□□□ 1.14
HLA-DQB1-208ENST00000484729 AATKQ6ZMQ8 1374 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms