RNA–Protein interactions for RNA: ENST00000484084.5

RTFDC1-208, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-208ENST00000484084 LMOD2Q6P5Q4 547 aa12.95□□□□□ -0.34
RTFDC1-208ENST00000484084 ACIN1Q9UKV3 1341 aaKnown RBP12.94□□□□□ -0.34
RTFDC1-208ENST00000484084 R3HDM1Q15032 1099 aaKnown RBP12.94□□□□□ -0.34
RTFDC1-208ENST00000484084 CAMKK2Q96RR4 588 aa12.94□□□□□ -0.34
RTFDC1-208ENST00000484084 TULP4Q9NRJ4 1543 aa12.93□□□□□ -0.34
RTFDC1-208ENST00000484084 EZH2Q15910 746 aaKnown RBP12.93□□□□□ -0.34
RTFDC1-208ENST00000484084 HIRIP3Q9BW71 556 aaPredicted RBP12.92□□□□□ -0.34
RTFDC1-208ENST00000484084 RREB1Q92766 1687 aa12.92□□□□□ -0.34
RTFDC1-208ENST00000484084 PHRF1Q9P1Y6 1649 aaKnown RBP12.91□□□□□ -0.34
RTFDC1-208ENST00000484084 SPATA31A1Q5TZJ5 1347 aa12.91□□□□□ -0.34
RTFDC1-208ENST00000484084 NUP188Q5SRE5 1749 aa12.9□□□□□ -0.34
RTFDC1-208ENST00000484084 WASLO00401 505 aaPredicted RBP12.89□□□□□ -0.35
RTFDC1-208ENST00000484084 TRAK1Q9UPV9 953 aa12.89□□□□□ -0.35
RTFDC1-208ENST00000484084 KIAA0232Q92628 1395 aa12.89□□□□□ -0.35
RTFDC1-208ENST00000484084 ATP7BP35670 1465 aa12.89□□□□□ -0.35
RTFDC1-208ENST00000484084 MINK1Q8N4C8 1332 aaPredicted RBP12.88□□□□□ -0.35
RTFDC1-208ENST00000484084 A0A0G2JS52 829 aa12.88□□□□□ -0.35
RTFDC1-208ENST00000484084 MYT1Q01538 1121 aa12.88□□□□□ -0.35
RTFDC1-208ENST00000484084 POGKQ9P215 609 aa12.88□□□□□ -0.35
RTFDC1-208ENST00000484084 GPRASP1Q5JY77 1395 aa12.88□□□□□ -0.35
RTFDC1-208ENST00000484084 ARHGEF28Q8N1W1 1705 aaKnown RBP12.88□□□□□ -0.35
RTFDC1-208ENST00000484084 LMO7Q8WWI1 1683 aa12.87□□□□□ -0.35
RTFDC1-208ENST00000484084 CAMTA1Q9Y6Y1 1673 aa12.87□□□□□ -0.35
RTFDC1-208ENST00000484084 TRIM37O94972 964 aa12.87□□□□□ -0.35
RTFDC1-208ENST00000484084 CHRNA2Q15822 529 aa12.87□□□□□ -0.35
RTFDC1-208ENST00000484084 TOPAZ1Q8N9V7 1692 aa12.86□□□□□ -0.35
RTFDC1-208ENST00000484084 NRKQ7Z2Y5 1582 aa12.86□□□□□ -0.35
RTFDC1-208ENST00000484084 FAM196AQ6ZSG2 479 aa12.85□□□□□ -0.35
RTFDC1-208ENST00000484084 PRDM11Q9NQV5 511 aa12.85□□□□□ -0.35
RTFDC1-208ENST00000484084 POLR3AO14802 1390 aaPredicted RBP12.84□□□□□ -0.35
RTFDC1-208ENST00000484084 PARD3Q8TEW0 1356 aa12.84□□□□□ -0.35
RTFDC1-208ENST00000484084 BARGINQ6ZT62 677 aa12.84□□□□□ -0.35
RTFDC1-208ENST00000484084 SSH2Q76I76 1423 aa12.84□□□□□ -0.35
RTFDC1-208ENST00000484084 ITSN1Q15811 1721 aa12.84□□□□□ -0.35
RTFDC1-208ENST00000484084 PEAK1Q9H792 1746 aa12.84□□□□□ -0.35
RTFDC1-208ENST00000484084 EIF3AQ14152 1382 aaKnown RBP12.83□□□□□ -0.36
RTFDC1-208ENST00000484084 APBA3O96018 575 aa12.83□□□□□ -0.36
RTFDC1-208ENST00000484084 NGDNQ8NEJ9 315 aaKnown RBP12.83□□□□□ -0.36
RTFDC1-208ENST00000484084 NUDT16Q96DE0 195 aaKnown RBP12.83□□□□□ -0.36
RTFDC1-208ENST00000484084 UTRNP46939 3433 aa12.82□□□□□ -0.36
RTFDC1-208ENST00000484084 PAK3O75914 559 aaPredicted RBP12.82□□□□□ -0.36
RTFDC1-208ENST00000484084 ZC3H6P61129 1189 aaKnown RBP12.82□□□□□ -0.36
RTFDC1-208ENST00000484084 LARP1Q6PKG0 1096 aaKnown RBP12.82□□□□□ -0.36
RTFDC1-208ENST00000484084 STRN4Q9NRL3 753 aa12.82□□□□□ -0.36
RTFDC1-208ENST00000484084 NUTM2GQ5VZR2 741 aa12.81□□□□□ -0.36
RTFDC1-208ENST00000484084 PARP4Q9UKK3 1724 aaKnown RBP12.81□□□□□ -0.36
RTFDC1-208ENST00000484084 CPDO75976 1380 aa12.81□□□□□ -0.36
RTFDC1-208ENST00000484084 NBPF8Q3BBV2 869 aa12.8□□□□□ -0.36
RTFDC1-208ENST00000484084 DCAF11Q8TEB1 546 aa12.8□□□□□ -0.36
RTFDC1-208ENST00000484084 USP35Q9P2H5 1018 aa12.8□□□□□ -0.36
RTFDC1-208ENST00000484084 USP19O94966 1318 aa12.8□□□□□ -0.36
RTFDC1-208ENST00000484084 RAB3GAP2Q9H2M9 1393 aa12.8□□□□□ -0.36
RTFDC1-208ENST00000484084 KDM2AQ9Y2K7 1162 aa12.79□□□□□ -0.36
RTFDC1-208ENST00000484084 ACEP12821 1306 aa12.79□□□□□ -0.36
RTFDC1-208ENST00000484084 CASZ1Q86V15 1759 aa12.79□□□□□ -0.36
RTFDC1-208ENST00000484084 COL5A2P05997 1499 aaPredicted RBP12.78□□□□□ -0.36
RTFDC1-208ENST00000484084 PLEKHG3A1L390 1219 aa12.78□□□□□ -0.36
RTFDC1-208ENST00000484084 PTF1AQ7RTS3 328 aa12.78□□□□□ -0.36
RTFDC1-208ENST00000484084 CDK19Q9BWU1 502 aa12.78□□□□□ -0.36
RTFDC1-208ENST00000484084 SBF2Q86WG5 1849 aa12.78□□□□□ -0.36
RTFDC1-208ENST00000484084 RGPD3A6NKT7 1758 aaPredicted RBP12.77□□□□□ -0.36
RTFDC1-208ENST00000484084 RGPD4Q7Z3J3 1758 aa12.77□□□□□ -0.36
RTFDC1-208ENST00000484084 TCP11L2Q8N4U5 519 aa12.77□□□□□ -0.37
RTFDC1-208ENST00000484084 PDGFDQ9GZP0 370 aaPredicted RBP12.77□□□□□ -0.37
RTFDC1-208ENST00000484084 LRRC37A3O60309 1634 aa12.77□□□□□ -0.37
RTFDC1-208ENST00000484084 COL18A1P39060 1754 aa12.76□□□□□ -0.37
RTFDC1-208ENST00000484084 YY1P25490 414 aa12.75□□□□□ -0.37
RTFDC1-208ENST00000484084 PDE3BQ13370 1112 aa12.75□□□□□ -0.37
RTFDC1-208ENST00000484084 PROM2Q8N271 834 aa12.75□□□□□ -0.37
RTFDC1-208ENST00000484084 ANO8Q9HCE9 1232 aaPredicted RBP12.75□□□□□ -0.37
RTFDC1-208ENST00000484084 CCDC61Q9Y6R9 512 aa12.75□□□□□ -0.37
RTFDC1-208ENST00000484084 KCNQ2O43526 872 aa12.74□□□□□ -0.37
RTFDC1-208ENST00000484084 GCP02774 474 aa12.74□□□□□ -0.37
RTFDC1-208ENST00000484084 THRAP3Q9Y2W1 955 aaKnown RBP12.74□□□□□ -0.37
RTFDC1-208ENST00000484084 SLIT3O75094 1523 aa12.73□□□□□ -0.37
RTFDC1-208ENST00000484084 EVA1CP58658 441 aa12.73□□□□□ -0.37
RTFDC1-208ENST00000484084 ABTB2Q8N961 1025 aa12.73□□□□□ -0.37
RTFDC1-208ENST00000484084 STAC3Q96MF2 364 aa12.73□□□□□ -0.37
RTFDC1-208ENST00000484084 WNK3Q9BYP7 1800 aa12.73□□□□□ -0.37
RTFDC1-208ENST00000484084 KIAA1210Q9ULL0 1709 aa12.73□□□□□ -0.37
RTFDC1-208ENST00000484084 CRB1P82279 1406 aa12.72□□□□□ -0.37
RTFDC1-208ENST00000484084 NINLQ9Y2I6 1382 aa12.72□□□□□ -0.37
RTFDC1-208ENST00000484084 PLSCR1O15162 318 aa12.72□□□□□ -0.37
RTFDC1-208ENST00000484084 NBPF14Q5TI25 921 aa12.72□□□□□ -0.37
RTFDC1-208ENST00000484084 SPON1Q9HCB6 807 aa12.72□□□□□ -0.37
RTFDC1-208ENST00000484084 MYOM1P52179 1685 aa12.71□□□□□ -0.37
RTFDC1-208ENST00000484084 PTGER2P43116 358 aa12.71□□□□□ -0.37
RTFDC1-208ENST00000484084 NBPF1Q3BBV0 1214 aa12.71□□□□□ -0.37
RTFDC1-208ENST00000484084 AXIN2Q9Y2T1 843 aa12.71□□□□□ -0.37
RTFDC1-208ENST00000484084 PIK3C2AO00443 1686 aa12.7□□□□□ -0.38
RTFDC1-208ENST00000484084 OVOS2A0A0G2JMS6 1433 aa12.7□□□□□ -0.38
RTFDC1-208ENST00000484084 OVOS2A0A0J9YW53 1432 aa12.7□□□□□ -0.38
RTFDC1-208ENST00000484084 BCL9O00512 1426 aa12.7□□□□□ -0.38
RTFDC1-208ENST00000484084 OVOS2Q6IE36 1432 aa12.7□□□□□ -0.38
RTFDC1-208ENST00000484084 PPIP5K1Q6PFW1 1433 aa12.7□□□□□ -0.38
RTFDC1-208ENST00000484084 AATKQ6ZMQ8 1374 aa12.69□□□□□ -0.38
RTFDC1-208ENST00000484084 MARCH10Q8NA82 808 aaPredicted RBP12.69□□□□□ -0.38
RTFDC1-208ENST00000484084 NLRP13Q86W25 1043 aa12.68□□□□□ -0.38
RTFDC1-208ENST00000484084 USP6P35125 1406 aa12.68□□□□□ -0.38
RTFDC1-208ENST00000484084 RGPD5Q99666 1765 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms