RNA–Protein interactions for RNA: ENST00000483904.5

NCOA1-208, Transcript of nuclear receptor coactivator 1, humanhuman

TSL 3

Gene NCOA1, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-208ENST00000483904 TFIP11Q9UBB9 837 aaKnown RBP8.34□□□□□ -1.07
NCOA1-208ENST00000483904 UNCXA6NJT0 531 aa8.33□□□□□ -1.08
NCOA1-208ENST00000483904 BCAMP50895 628 aa8.33□□□□□ -1.08
NCOA1-208ENST00000483904 USP46P62068 366 aa8.33□□□□□ -1.08
NCOA1-208ENST00000483904 VAC14Q08AM6 782 aa8.33□□□□□ -1.08
NCOA1-208ENST00000483904 ELOAQ14241 798 aaKnown RBP8.33□□□□□ -1.08
NCOA1-208ENST00000483904 CCER1Q8TC90 406 aaPredicted RBP8.33□□□□□ -1.08
NCOA1-208ENST00000483904 ZFRQ96KR1 1074 aaKnown RBP8.33□□□□□ -1.08
NCOA1-208ENST00000483904 MAFBQ9Y5Q3 323 aaPredicted RBP8.33□□□□□ -1.08
NCOA1-208ENST00000483904 FDX1P10109 184 aa8.32□□□□□ -1.08
NCOA1-208ENST00000483904 HDGFP51858 240 aaKnown RBP8.32□□□□□ -1.08
NCOA1-208ENST00000483904 CFHP08603 1231 aa8.31□□□□□ -1.08
NCOA1-208ENST00000483904 FUT2Q10981 343 aa8.31□□□□□ -1.08
NCOA1-208ENST00000483904 SLF2Q8IX21 1173 aa8.31□□□□□ -1.08
NCOA1-208ENST00000483904 HELBQ8NG08 1087 aaPredicted RBP8.31□□□□□ -1.08
NCOA1-208ENST00000483904 TRAF7Q6Q0C0 670 aa8.3□□□□□ -1.08
NCOA1-208ENST00000483904 TXNDC2Q86VQ3 553 aa8.3□□□□□ -1.08
NCOA1-208ENST00000483904 HMX1Q9NP08 348 aaPredicted RBP8.3□□□□□ -1.08
NCOA1-208ENST00000483904 PRR7Q8TB68 274 aa8.29□□□□□ -1.08
NCOA1-208ENST00000483904 WBP1LQ9NX94 342 aa8.29□□□□□ -1.08
NCOA1-208ENST00000483904 ATP9BO43861 1147 aa8.28□□□□□ -1.08
NCOA1-208ENST00000483904 RNF40O75150 1001 aa8.28□□□□□ -1.08
NCOA1-208ENST00000483904 CTDSPL2Q05D32 466 aa8.28□□□□□ -1.08
NCOA1-208ENST00000483904 SEMA3FQ13275 785 aa8.28□□□□□ -1.08
NCOA1-208ENST00000483904 LCE2BO14633 110 aa8.27□□□□□ -1.09
NCOA1-208ENST00000483904 GFRA3O60609 400 aa8.27□□□□□ -1.09
NCOA1-208ENST00000483904 SLC4A3P48751 1232 aa8.27□□□□□ -1.09
NCOA1-208ENST00000483904 PNMA1Q8ND90 353 aa8.27□□□□□ -1.09
NCOA1-208ENST00000483904 CDK11BP21127 795 aaKnown RBP8.26□□□□□ -1.09
NCOA1-208ENST00000483904 ATP6V1AP38606 617 aa8.26□□□□□ -1.09
NCOA1-208ENST00000483904 CDK11AQ9UQ88 783 aaPredicted RBP8.26□□□□□ -1.09
NCOA1-208ENST00000483904 MTMR2Q13614 643 aa8.25□□□□□ -1.09
NCOA1-208ENST00000483904 CDCA8Q53HL2 280 aa8.25□□□□□ -1.09
NCOA1-208ENST00000483904 DNAJC14Q6Y2X3 702 aaPredicted RBP8.25□□□□□ -1.09
NCOA1-208ENST00000483904 SYMPKQ92797 1274 aaKnown RBP8.25□□□□□ -1.09
NCOA1-208ENST00000483904 SIRT1Q96EB6 747 aa8.25□□□□□ -1.09
NCOA1-208ENST00000483904 LRCH3Q96II8 777 aa8.25□□□□□ -1.09
NCOA1-208ENST00000483904 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.25□□□□□ -1.09
NCOA1-208ENST00000483904 CFAP99D6REC4 459 aa8.24□□□□□ -1.09
NCOA1-208ENST00000483904 ARID4AP29374 1257 aaPredicted RBP8.24□□□□□ -1.09
NCOA1-208ENST00000483904 EIF4G2P78344 907 aaKnown RBP eCLIP8.24□□□□□ -1.091e-6■■■□□ 18
NCOA1-208ENST00000483904 TBC1D9Q6ZT07 1266 aa8.24□□□□□ -1.09
NCOA1-208ENST00000483904 ACTN4O43707 911 aaKnown RBP8.23□□□□□ -1.09
NCOA1-208ENST00000483904 PUS10Q3MIT2 529 aaKnown RBP8.23□□□□□ -1.09
NCOA1-208ENST00000483904 KMT5BQ4FZB7 885 aa8.23□□□□□ -1.09
NCOA1-208ENST00000483904 GRIPAP1Q4V328 841 aa8.23□□□□□ -1.09
NCOA1-208ENST00000483904 MORN1Q5T089 497 aa8.23□□□□□ -1.09
NCOA1-208ENST00000483904 KANK4Q5T7N3 995 aaPredicted RBP8.23□□□□□ -1.09
NCOA1-208ENST00000483904 NFATC2IPQ8NCF5 419 aa8.23□□□□□ -1.09
NCOA1-208ENST00000483904 MRRFQ96E11 262 aaKnown RBP8.23□□□□□ -1.09
NCOA1-208ENST00000483904 KIAA1522Q9P206 1035 aaPredicted RBP8.23□□□□□ -1.09
NCOA1-208ENST00000483904 TSR3Q9UJK0 312 aaKnown RBP8.23□□□□□ -1.09
NCOA1-208ENST00000483904 C6orf229H3BNL8 230 aa8.22□□□□□ -1.09
NCOA1-208ENST00000483904 TMEM164Q5U3C3 297 aa8.22□□□□□ -1.09
NCOA1-208ENST00000483904 LRRN4Q8WUT4 740 aa8.22□□□□□ -1.09
NCOA1-208ENST00000483904 ZMIZ1Q9ULJ6 1067 aa8.22□□□□□ -1.09
NCOA1-208ENST00000483904 SLC27A5Q9Y2P5 690 aa8.22□□□□□ -1.09
NCOA1-208ENST00000483904 PHLDB3Q6NSJ2 640 aa8.21□□□□□ -1.1
NCOA1-208ENST00000483904 NRG2O14511 850 aaPredicted RBP8.2□□□□□ -1.1
NCOA1-208ENST00000483904 ZNF16P17020 682 aaPredicted RBP8.2□□□□□ -1.1
NCOA1-208ENST00000483904 APLP1P51693 650 aa8.2□□□□□ -1.1
NCOA1-208ENST00000483904 HPS5Q9UPZ3 1129 aa8.2□□□□□ -1.1
NCOA1-208ENST00000483904 FAM196BA6NMK8 535 aa8.19□□□□□ -1.1
NCOA1-208ENST00000483904 SSFA2P28290 1259 aa8.19□□□□□ -1.1
NCOA1-208ENST00000483904 PLEKHM2Q8IWE5 1019 aa8.19□□□□□ -1.1
NCOA1-208ENST00000483904 NOVA2Q9UNW9 492 aaKnown RBP8.19□□□□□ -1.1
NCOA1-208ENST00000483904 SOWAHDA6NJG2 315 aa8.18□□□□□ -1.1
NCOA1-208ENST00000483904 TCF3P15923 654 aa8.18□□□□□ -1.1
NCOA1-208ENST00000483904 PPP4CP60510 307 aa8.18□□□□□ -1.1
NCOA1-208ENST00000483904 BLOC1S3Q6QNY0 202 aa8.18□□□□□ -1.1
NCOA1-208ENST00000483904 EPS8L1Q8TE68 723 aa8.18□□□□□ -1.1
NCOA1-208ENST00000483904 STK32AQ8WU08 396 aa8.18□□□□□ -1.1
NCOA1-208ENST00000483904 TSC1Q92574 1164 aa8.18□□□□□ -1.1
NCOA1-208ENST00000483904 C8orf37Q96NL8 207 aa8.18□□□□□ -1.1
NCOA1-208ENST00000483904 PRKD2Q9BZL6 878 aa8.18□□□□□ -1.1
NCOA1-208ENST00000483904 PER1O15534 1290 aaPredicted RBP8.17□□□□□ -1.1
NCOA1-208ENST00000483904 VAMP1P23763 118 aa8.17□□□□□ -1.1
NCOA1-208ENST00000483904 NR1H3Q13133 447 aa8.17□□□□□ -1.1
NCOA1-208ENST00000483904 RNF19BQ6ZMZ0 732 aa8.17□□□□□ -1.1
NCOA1-208ENST00000483904 BCL2L13Q9BXK5 485 aa8.17□□□□□ -1.1
NCOA1-208ENST00000483904 CANXP27824 592 aaKnown RBP8.16□□□□□ -1.1
NCOA1-208ENST00000483904 RETREG3Q86VR2 466 aa8.16□□□□□ -1.1
NCOA1-208ENST00000483904 CLP1Q92989 425 aaKnown RBP8.16□□□□□ -1.1
NCOA1-208ENST00000483904 USP17L3A6NCW0 530 aa8.15□□□□□ -1.1
NCOA1-208ENST00000483904 USP17L4A6NCW7 530 aa8.15□□□□□ -1.1
NCOA1-208ENST00000483904 NR6A1Q15406 480 aa8.15□□□□□ -1.1
NCOA1-208ENST00000483904 BRICD5Q6PL45 260 aa8.15□□□□□ -1.1
NCOA1-208ENST00000483904 USP17L2Q6R6M4 530 aa8.15□□□□□ -1.1
NCOA1-208ENST00000483904 USP17L1Q7RTZ2 530 aa8.15□□□□□ -1.1
NCOA1-208ENST00000483904 CCDC125Q86Z20 511 aa8.15□□□□□ -1.1
NCOA1-208ENST00000483904 FAM177A1Q8N128 213 aaPredicted RBP8.15□□□□□ -1.1
NCOA1-208ENST00000483904 PRR14Q9BWN1 585 aa8.15□□□□□ -1.1
NCOA1-208ENST00000483904 V9GY48 417 aaPredicted RBP8.15□□□□□ -1.1
NCOA1-208ENST00000483904 MARSP56192 900 aaKnown RBP8.14□□□□□ -1.11
NCOA1-208ENST00000483904 Q3C1V9 767 aa8.14□□□□□ -1.11
NCOA1-208ENST00000483904 TJAP1Q5JTD0 557 aa8.14□□□□□ -1.11
NCOA1-208ENST00000483904 ZNF787Q6DD87 383 aa8.14□□□□□ -1.11
NCOA1-208ENST00000483904 SCUBE3Q8IX30 993 aa8.14□□□□□ -1.11
NCOA1-208ENST00000483904 THAP11Q96EK4 314 aa8.14□□□□□ -1.11
NCOA1-208ENST00000483904 USP17L15C9J2P7 530 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms