RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 RIMS2Q9UQ26 1411 aa8.99□□□□□ -0.97
CSDE1-207ENST00000483407 IER5LQ5T953 404 aa8.99□□□□□ -0.97
CSDE1-207ENST00000483407 GPHNQ9NQX3 736 aaPredicted RBP8.99□□□□□ -0.97
CSDE1-207ENST00000483407 SLAIN2Q9P270 581 aa8.99□□□□□ -0.97
CSDE1-207ENST00000483407 TBX22Q9Y458 520 aa8.99□□□□□ -0.97
CSDE1-207ENST00000483407 ZFYVE9O95405 1425 aa8.98□□□□□ -0.97
CSDE1-207ENST00000483407 C14orf37Q86TY3 774 aa8.98□□□□□ -0.97
CSDE1-207ENST00000483407 SLAIN1Q8ND83 568 aa8.98□□□□□ -0.97
CSDE1-207ENST00000483407 ZC3H15Q8WU90 426 aaKnown RBP8.98□□□□□ -0.97
CSDE1-207ENST00000483407 COLQQ9Y215 455 aaPredicted RBP8.98□□□□□ -0.97
CSDE1-207ENST00000483407 SRCAPQ6ZRS2 3230 aa8.98□□□□□ -0.97
CSDE1-207ENST00000483407 NWD1Q149M9 1564 aa8.98□□□□□ -0.97
CSDE1-207ENST00000483407 NCOA3Q9Y6Q9 1424 aa8.97□□□□□ -0.97
CSDE1-207ENST00000483407 SMYD5Q6GMV2 418 aa8.97□□□□□ -0.97
CSDE1-207ENST00000483407 ROCK1Q13464 1354 aa8.97□□□□□ -0.97
CSDE1-207ENST00000483407 JCADQ9P266 1359 aa8.97□□□□□ -0.97
CSDE1-207ENST00000483407 POTEAQ6S8J7 498 aa8.96□□□□□ -0.98
CSDE1-207ENST00000483407 ROBO1Q9Y6N7 1651 aa8.96□□□□□ -0.98
CSDE1-207ENST00000483407 XIRP1Q702N8 1843 aaKnown RBP8.96□□□□□ -0.98
CSDE1-207ENST00000483407 ATF3P18847 181 aa8.95□□□□□ -0.98
CSDE1-207ENST00000483407 PPP1R15BQ5SWA1 713 aa8.95□□□□□ -0.98
CSDE1-207ENST00000483407 NUTM2DQ5VT03 806 aaPredicted RBP8.95□□□□□ -0.98
CSDE1-207ENST00000483407 C19orf44Q9H6X5 657 aa8.95□□□□□ -0.98
CSDE1-207ENST00000483407 NUP155O75694 1391 aa8.95□□□□□ -0.98
CSDE1-207ENST00000483407 PIK3R4Q99570 1358 aa8.95□□□□□ -0.98
CSDE1-207ENST00000483407 TMEM132AQ24JP5 1023 aa8.94□□□□□ -0.98
CSDE1-207ENST00000483407 DPY19L2Q6NUT2 758 aa8.94□□□□□ -0.98
CSDE1-207ENST00000483407 PDCD7Q8N8D1 485 aaKnown RBP8.94□□□□□ -0.98
CSDE1-207ENST00000483407 TMEM131LA2VDJ0 1609 aa8.94□□□□□ -0.98
CSDE1-207ENST00000483407 ITGAEP38570 1179 aa8.93□□□□□ -0.98
CSDE1-207ENST00000483407 MEX3CQ5U5Q3 659 aaKnown RBP8.93□□□□□ -0.98
CSDE1-207ENST00000483407 AMOTL2Q9Y2J4 779 aa8.93□□□□□ -0.98
CSDE1-207ENST00000483407 SPATA31A6Q5VVP1 1343 aa8.93□□□□□ -0.98
CSDE1-207ENST00000483407 ADAMTS13Q76LX8 1427 aa8.93□□□□□ -0.98
CSDE1-207ENST00000483407 UNC13BO14795 1591 aa8.93□□□□□ -0.98
CSDE1-207ENST00000483407 DIP2AQ14689 1571 aa8.92□□□□□ -0.98
CSDE1-207ENST00000483407 SNPHO15079 494 aa8.92□□□□□ -0.98
CSDE1-207ENST00000483407 MICALL2Q8IY33 904 aa8.92□□□□□ -0.98
CSDE1-207ENST00000483407 GCC2Q8IWJ2 1684 aa8.91□□□□□ -0.98
CSDE1-207ENST00000483407 IRX5P78411 483 aaPredicted RBP8.91□□□□□ -0.98
CSDE1-207ENST00000483407 ZNF326Q5BKZ1 582 aaKnown RBP8.91□□□□□ -0.98
CSDE1-207ENST00000483407 ZNF772Q68DY9 489 aaPredicted RBP8.91□□□□□ -0.98
CSDE1-207ENST00000483407 ZMYND10O75800 440 aa8.9□□□□□ -0.98
CSDE1-207ENST00000483407 FOXK1P85037 733 aa8.9□□□□□ -0.98
CSDE1-207ENST00000483407 DSG2Q14126 1118 aa8.9□□□□□ -0.98
CSDE1-207ENST00000483407 PHLPP1O60346 1717 aa8.9□□□□□ -0.98
CSDE1-207ENST00000483407 TRPM2O94759 1503 aa8.9□□□□□ -0.99
CSDE1-207ENST00000483407 CHD2O14647 1828 aaKnown RBP8.89□□□□□ -0.99
CSDE1-207ENST00000483407 BRINP3Q76B58 766 aa8.89□□□□□ -0.99
CSDE1-207ENST00000483407 OCEL1Q9H607 264 aa8.89□□□□□ -0.99
CSDE1-207ENST00000483407 IQGAP3Q86VI3 1631 aa8.89□□□□□ -0.99
CSDE1-207ENST00000483407 DCCP43146 1447 aa8.88□□□□□ -0.99
CSDE1-207ENST00000483407 E9PCH4 1651 aa8.88□□□□□ -0.99
CSDE1-207ENST00000483407 COL16A1Q07092 1604 aaPredicted RBP8.88□□□□□ -0.99
CSDE1-207ENST00000483407 EMILIN3Q9NT22 766 aa8.88□□□□□ -0.99
CSDE1-207ENST00000483407 PTPRUQ92729 1446 aa8.88□□□□□ -0.99
CSDE1-207ENST00000483407 AHDC1Q5TGY3 1603 aaPredicted RBP8.87□□□□□ -0.99
CSDE1-207ENST00000483407 NUTM2BA6NNL0 878 aaPredicted RBP8.87□□□□□ -0.99
CSDE1-207ENST00000483407 NUTM2EB1AL46 878 aaPredicted RBP8.87□□□□□ -0.99
CSDE1-207ENST00000483407 BRPF1P55201 1214 aaPredicted RBP8.87□□□□□ -0.99
CSDE1-207ENST00000483407 NUTM2AQ8IVF1 878 aaPredicted RBP8.87□□□□□ -0.99
CSDE1-207ENST00000483407 TMC2Q8TDI7 906 aa8.87□□□□□ -0.99
CSDE1-207ENST00000483407 SLC24A3Q9HC58 644 aa8.87□□□□□ -0.99
CSDE1-207ENST00000483407 LRP6O75581 1613 aa8.87□□□□□ -0.99
CSDE1-207ENST00000483407 MYO5BQ9ULV0 1848 aa8.87□□□□□ -0.99
CSDE1-207ENST00000483407 SPDYE16A6NNV3 312 aaPredicted RBP8.86□□□□□ -0.99
CSDE1-207ENST00000483407 RXRBP28702 533 aa8.86□□□□□ -0.99
CSDE1-207ENST00000483407 MLLT3P42568 568 aaPredicted RBP8.86□□□□□ -0.99
CSDE1-207ENST00000483407 PPARGC1BQ86YN6 1023 aaKnown RBP8.86□□□□□ -0.99
CSDE1-207ENST00000483407 TRIM52Q96A61 297 aa8.86□□□□□ -0.99
CSDE1-207ENST00000483407 LRRC59Q96AG4 307 aaKnown RBP8.86□□□□□ -0.99
CSDE1-207ENST00000483407 BOLA1Q9Y3E2 137 aa8.86□□□□□ -0.99
CSDE1-207ENST00000483407 GTF3C3Q9Y5Q9 886 aa8.86□□□□□ -0.99
CSDE1-207ENST00000483407 METP08581 1390 aa8.86□□□□□ -0.99
CSDE1-207ENST00000483407 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.85□□□□□ -0.99
CSDE1-207ENST00000483407 DPYSL4O14531 572 aa8.85□□□□□ -0.99
CSDE1-207ENST00000483407 KIF3CO14782 793 aa8.85□□□□□ -0.99
CSDE1-207ENST00000483407 PDIA6Q15084 440 aa8.85□□□□□ -0.99
CSDE1-207ENST00000483407 SETBP1Q9Y6X0 1596 aa8.85□□□□□ -0.99
CSDE1-207ENST00000483407 MST1RQ04912 1400 aa8.84□□□□□ -0.99
CSDE1-207ENST00000483407 BARGINQ6ZT62 677 aa8.84□□□□□ -0.99
CSDE1-207ENST00000483407 SETD5Q9C0A6 1442 aa8.84□□□□□ -0.99
CSDE1-207ENST00000483407 ASXL1Q8IXJ9 1541 aa8.84□□□□□ -0.99
CSDE1-207ENST00000483407 ADGRL3Q9HAR2 1447 aa8.83□□□□□ -1
CSDE1-207ENST00000483407 RBM26Q5T8P6 1007 aaKnown RBP8.83□□□□□ -1
CSDE1-207ENST00000483407 UPF1Q92900 1129 aaKnown RBP eCLIP8.83□□□□□ -12e-6■■□□□ 14.2
CSDE1-207ENST00000483407 AFF2P51816 1311 aa8.82□□□□□ -1
CSDE1-207ENST00000483407 SHPRHQ149N8 1683 aa8.82□□□□□ -1
CSDE1-207ENST00000483407 C2orf72A6NCS6 295 aa8.82□□□□□ -1
CSDE1-207ENST00000483407 PLPP6Q8IY26 295 aa8.82□□□□□ -1
CSDE1-207ENST00000483407 C8orf37Q96NL8 207 aa8.82□□□□□ -1
CSDE1-207ENST00000483407 XRN1Q8IZH2 1706 aaKnown RBP8.81□□□□□ -1
CSDE1-207ENST00000483407 CDK12Q9NYV4 1490 aaPredicted RBP8.81□□□□□ -1
CSDE1-207ENST00000483407 RPGRIP1LQ68CZ1 1315 aa8.8□□□□□ -1
CSDE1-207ENST00000483407 RRBP1Q9P2E9 1410 aaKnown RBP8.8□□□□□ -1
CSDE1-207ENST00000483407 NRXN3Q9Y4C0 1643 aa8.8□□□□□ -1
CSDE1-207ENST00000483407 SPHKAPQ2M3C7 1700 aa8.8□□□□□ -1
CSDE1-207ENST00000483407 G3V3G9 751 aa8.8□□□□□ -1
CSDE1-207ENST00000483407 PLCG2P16885 1265 aa8.8□□□□□ -1
CSDE1-207ENST00000483407 RBM6P78332 1123 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms