RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 KIF2CQ99661 725 aa14.74□□□□□ -0.05
VTI1A-205ENST00000483122 ATP10AO60312 1499 aa14.73□□□□□ -0.05
VTI1A-205ENST00000483122 CARD14Q9BXL6 1004 aa14.73□□□□□ -0.05
VTI1A-205ENST00000483122 PRDM10Q9NQV6 1147 aa14.73□□□□□ -0.05
VTI1A-205ENST00000483122 MADDQ8WXG6 1647 aa14.73□□□□□ -0.05
VTI1A-205ENST00000483122 KLHL40Q2TBA0 621 aa14.73□□□□□ -0.05
VTI1A-205ENST00000483122 FTSJ3Q8IY81 847 aaKnown RBP14.73□□□□□ -0.05
VTI1A-205ENST00000483122 DZIP1LQ8IYY4 767 aaKnown RBP14.73□□□□□ -0.05
VTI1A-205ENST00000483122 NOL7Q9UMY1 257 aaKnown RBP14.73□□□□□ -0.05
VTI1A-205ENST00000483122 ZNF500O60304 480 aaPredicted RBP14.72□□□□□ -0.05
VTI1A-205ENST00000483122 ZKSCAN2Q63HK3 967 aa14.72□□□□□ -0.05
VTI1A-205ENST00000483122 IBTKQ9P2D0 1353 aaPredicted RBP14.72□□□□□ -0.05
VTI1A-205ENST00000483122 HDAC1Q13547 482 aaPredicted RBP14.72□□□□□ -0.05
VTI1A-205ENST00000483122 RUNDC1Q96C34 613 aa14.72□□□□□ -0.05
VTI1A-205ENST00000483122 PHF23Q9BUL5 403 aaPredicted RBP14.72□□□□□ -0.05
VTI1A-205ENST00000483122 SHPRHQ149N8 1683 aa14.72□□□□□ -0.05
VTI1A-205ENST00000483122 SCAF11Q99590 1463 aaKnown RBP14.71□□□□□ -0.05
VTI1A-205ENST00000483122 BAG4O95429 457 aaKnown RBP14.71□□□□□ -0.05
VTI1A-205ENST00000483122 RBM42Q9BTD8 480 aaKnown RBP14.71□□□□□ -0.05
VTI1A-205ENST00000483122 AK9Q5TCS8 1911 aa14.71□□□□□ -0.05
VTI1A-205ENST00000483122 CEP152O94986 1710 aa14.71□□□□□ -0.05
VTI1A-205ENST00000483122 POLR3AO14802 1390 aaPredicted RBP14.71□□□□□ -0.05
VTI1A-205ENST00000483122 IQSEC2Q5JU85 1478 aa14.71□□□□□ -0.06
VTI1A-205ENST00000483122 WDR63Q8IWG1 891 aa14.71□□□□□ -0.06
VTI1A-205ENST00000483122 GAS2L2Q8NHY3 880 aa14.71□□□□□ -0.06
VTI1A-205ENST00000483122 ZHX1Q9UKY1 873 aaPredicted RBP14.71□□□□□ -0.06
VTI1A-205ENST00000483122 KDM5AP29375 1690 aaKnown RBP14.7□□□□□ -0.06
VTI1A-205ENST00000483122 HS1BP3Q53T59 392 aa14.7□□□□□ -0.06
VTI1A-205ENST00000483122 RBSNQ9H1K0 784 aa14.7□□□□□ -0.06
VTI1A-205ENST00000483122 GOLGA6L22H0YM25 854 aa14.7□□□□□ -0.06
VTI1A-205ENST00000483122 K7ELQ4 463 aaPredicted RBP14.7□□□□□ -0.06
VTI1A-205ENST00000483122 ZNF445P59923 1031 aa14.7□□□□□ -0.06
VTI1A-205ENST00000483122 IQGAP3Q86VI3 1631 aa14.69□□□□□ -0.06
VTI1A-205ENST00000483122 NCLP19338 710 aaKnown RBP14.68□□□□□ -0.06
VTI1A-205ENST00000483122 CAVIN1Q6NZI2 390 aaKnown RBP14.68□□□□□ -0.06
VTI1A-205ENST00000483122 PDLIM2Q96JY6 352 aa14.68□□□□□ -0.06
VTI1A-205ENST00000483122 AGLP35573 1532 aa14.68□□□□□ -0.06
VTI1A-205ENST00000483122 DYNC1I1O14576 645 aa14.68□□□□□ -0.06
VTI1A-205ENST00000483122 TNNT2P45379 298 aaPredicted RBP14.68□□□□□ -0.06
VTI1A-205ENST00000483122 CLEC17AQ6ZS10 378 aa14.68□□□□□ -0.06
VTI1A-205ENST00000483122 ITPRIPQ8IWB1 547 aa14.68□□□□□ -0.06
VTI1A-205ENST00000483122 ZSCAN23Q3MJ62 389 aa14.67□□□□□ -0.06
VTI1A-205ENST00000483122 LNPKQ9C0E8 428 aa14.67□□□□□ -0.06
VTI1A-205ENST00000483122 TRIM27P14373 513 aa14.67□□□□□ -0.06
VTI1A-205ENST00000483122 MCTP1Q6DN14 999 aa14.67□□□□□ -0.06
VTI1A-205ENST00000483122 ZKSCAN5Q9Y2L8 839 aa14.66□□□□□ -0.06
VTI1A-205ENST00000483122 SIGLEC1Q9BZZ2 1709 aa14.66□□□□□ -0.06
VTI1A-205ENST00000483122 PRIM1P49642 420 aaKnown RBP14.65□□□□□ -0.06
VTI1A-205ENST00000483122 MTERF4Q7Z6M4 381 aaKnown RBP14.65□□□□□ -0.06
VTI1A-205ENST00000483122 SMC4Q9NTJ3 1288 aa14.65□□□□□ -0.06
VTI1A-205ENST00000483122 KANK1Q14678 1352 aa14.65□□□□□ -0.06
VTI1A-205ENST00000483122 NUCB1Q02818 461 aa14.65□□□□□ -0.06
VTI1A-205ENST00000483122 TSR2Q969E8 191 aaKnown RBP14.65□□□□□ -0.06
VTI1A-205ENST00000483122 DDX19BQ9UMR2 479 aa14.65□□□□□ -0.06
VTI1A-205ENST00000483122 LMBRD1Q9NUN5 540 aa14.64□□□□□ -0.07
VTI1A-205ENST00000483122 DEPDC5O75140 1603 aa14.64□□□□□ -0.07
VTI1A-205ENST00000483122 ERVK-7P63135 1459 aa14.64□□□□□ -0.07
VTI1A-205ENST00000483122 SASS6Q6UVJ0 657 aa14.64□□□□□ -0.07
VTI1A-205ENST00000483122 RBM27Q9P2N5 1060 aaKnown RBP14.64□□□□□ -0.07
VTI1A-205ENST00000483122 ARHGAP31Q2M1Z3 1444 aa14.64□□□□□ -0.07
VTI1A-205ENST00000483122 CSPP1Q1MSJ5 1256 aa14.63□□□□□ -0.07
VTI1A-205ENST00000483122 CCDC27Q2M243 656 aa14.63□□□□□ -0.07
VTI1A-205ENST00000483122 DMTNQ08495 405 aa14.63□□□□□ -0.07
VTI1A-205ENST00000483122 TMEM57Q8N5G2 664 aa14.63□□□□□ -0.07
VTI1A-205ENST00000483122 MORC1Q86VD1 984 aa14.62□□□□□ -0.07
VTI1A-205ENST00000483122 CHD1LQ86WJ1 897 aa14.62□□□□□ -0.07
VTI1A-205ENST00000483122 SSH1Q8WYL5 1049 aa14.62□□□□□ -0.07
VTI1A-205ENST00000483122 JARID2Q92833 1246 aaPredicted RBP14.62□□□□□ -0.07
VTI1A-205ENST00000483122 SPHKAPQ2M3C7 1700 aa14.62□□□□□ -0.07
VTI1A-205ENST00000483122 EXOSC9Q06265 439 aaKnown RBP14.62□□□□□ -0.07
VTI1A-205ENST00000483122 BMP2KLQ5H9B9 411 aa14.62□□□□□ -0.07
VTI1A-205ENST00000483122 CCDC94Q9BW85 323 aaPredicted RBP14.62□□□□□ -0.07
VTI1A-205ENST00000483122 ZBTB40Q9NUA8 1239 aa14.62□□□□□ -0.07
VTI1A-205ENST00000483122 ATF7IPQ6VMQ6 1270 aa14.61□□□□□ -0.07
VTI1A-205ENST00000483122 TBC1D9Q6ZT07 1266 aa14.61□□□□□ -0.07
VTI1A-205ENST00000483122 NOB1Q9ULX3 412 aaKnown RBP14.61□□□□□ -0.07
VTI1A-205ENST00000483122 KIF3BO15066 747 aa14.61□□□□□ -0.07
VTI1A-205ENST00000483122 PKP1Q13835 747 aa14.61□□□□□ -0.07
VTI1A-205ENST00000483122 ZSCAN20P17040 1043 aaPredicted RBP14.6□□□□□ -0.07
VTI1A-205ENST00000483122 UTP14CQ5TAP6 766 aaKnown RBP14.6□□□□□ -0.07
VTI1A-205ENST00000483122 MROH1Q8NDA8 1641 aa14.6□□□□□ -0.07
VTI1A-205ENST00000483122 ZBTB7CA1YPR0 619 aa14.6□□□□□ -0.07
VTI1A-205ENST00000483122 FGD1P98174 961 aa14.6□□□□□ -0.07
VTI1A-205ENST00000483122 MCM5P33992 734 aa14.59□□□□□ -0.07
VTI1A-205ENST00000483122 GPT2Q8TD30 523 aa14.59□□□□□ -0.07
VTI1A-205ENST00000483122 TSC1Q92574 1164 aa14.58□□□□□ -0.07
VTI1A-205ENST00000483122 CCDC39Q9UFE4 941 aa14.58□□□□□ -0.07
VTI1A-205ENST00000483122 KIF16BQ96L93 1317 aa14.58□□□□□ -0.08
VTI1A-205ENST00000483122 CYP2E1P05181 493 aaPredicted RBP14.58□□□□□ -0.08
VTI1A-205ENST00000483122 MTHFSP49914 203 aa14.58□□□□□ -0.08
VTI1A-205ENST00000483122 NSD3Q9BZ95 1437 aa14.58□□□□□ -0.08
VTI1A-205ENST00000483122 ZC3H13Q5T200 1668 aaKnown RBP14.58□□□□□ -0.08
VTI1A-205ENST00000483122 PRPF40AO75400 957 aaKnown RBP14.57□□□□□ -0.08
VTI1A-205ENST00000483122 ANKRD45Q5TZF3 282 aa14.57□□□□□ -0.08
VTI1A-205ENST00000483122 CHAMP1Q96JM3 812 aa14.57□□□□□ -0.08
VTI1A-205ENST00000483122 VWDEQ8N2E2 1590 aa14.56□□□□□ -0.08
VTI1A-205ENST00000483122 SYCE3A1L190 88 aa14.56□□□□□ -0.08
VTI1A-205ENST00000483122 CT47B1P0C2W7 299 aaPredicted RBP14.56□□□□□ -0.08
VTI1A-205ENST00000483122 NUCB2P80303 420 aa14.56□□□□□ -0.08
VTI1A-205ENST00000483122 CFAP70Q5T0N1 1121 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms