RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 CHD2O14647 1828 aaKnown RBP16.98■□□□□ 0.31
TSPAN1-208ENST00000482928 BAG6P46379 1132 aa16.98■□□□□ 0.31
TSPAN1-208ENST00000482928 BRINP3Q76B58 766 aa16.98■□□□□ 0.31
TSPAN1-208ENST00000482928 CADPS2Q86UW7 1296 aa16.98■□□□□ 0.31
TSPAN1-208ENST00000482928 PCDH10Q9P2E7 1040 aa16.98■□□□□ 0.31
TSPAN1-208ENST00000482928 CCER2I3L3R5 266 aa16.97■□□□□ 0.31
TSPAN1-208ENST00000482928 WASLO00401 505 aaPredicted RBP16.97■□□□□ 0.31
TSPAN1-208ENST00000482928 LRRC59Q96AG4 307 aaKnown RBP16.97■□□□□ 0.31
TSPAN1-208ENST00000482928 PRKRIP1Q9H875 184 aaPredicted RBP16.97■□□□□ 0.31
TSPAN1-208ENST00000482928 CAPN15O75808 1086 aa16.96■□□□□ 0.31
TSPAN1-208ENST00000482928 ATF3P18847 181 aa16.95■□□□□ 0.3
TSPAN1-208ENST00000482928 TERF2IPQ9NYB0 399 aa16.95■□□□□ 0.3
TSPAN1-208ENST00000482928 PPP1R1BQ9UD71 204 aaPredicted RBP16.95■□□□□ 0.3
TSPAN1-208ENST00000482928 ADGRB2O60241 1585 aa16.94■□□□□ 0.3
TSPAN1-208ENST00000482928 GIGYF1O75420 1035 aaPredicted RBP16.94■□□□□ 0.3
TSPAN1-208ENST00000482928 RALBP1Q15311 655 aa16.94■□□□□ 0.3
TSPAN1-208ENST00000482928 HDGFL2Q7Z4V5 671 aaPredicted RBP16.94■□□□□ 0.3
TSPAN1-208ENST00000482928 CC2D1BQ5T0F9 858 aaKnown RBP16.93■□□□□ 0.3
TSPAN1-208ENST00000482928 FNBP4Q8N3X1 1017 aaPredicted RBP16.93■□□□□ 0.3
TSPAN1-208ENST00000482928 SLC12A5Q9H2X9 1139 aa16.93■□□□□ 0.3
TSPAN1-208ENST00000482928 ANKRD36BQ8N2N9 1353 aa16.92■□□□□ 0.3
TSPAN1-208ENST00000482928 NCOA3Q9Y6Q9 1424 aa16.92■□□□□ 0.3
TSPAN1-208ENST00000482928 NSD3Q9BZ95 1437 aa16.9■□□□□ 0.3
TSPAN1-208ENST00000482928 PER1O15534 1290 aaPredicted RBP16.9■□□□□ 0.3
TSPAN1-208ENST00000482928 NUDT16Q96DE0 195 aaKnown RBP16.9■□□□□ 0.3
TSPAN1-208ENST00000482928 GJD4Q96KN9 370 aaPredicted RBP16.89■□□□□ 0.29
TSPAN1-208ENST00000482928 RGPD1P0DJD0 1748 aa16.89■□□□□ 0.29
TSPAN1-208ENST00000482928 PPIP5K1Q6PFW1 1433 aa16.88■□□□□ 0.29
TSPAN1-208ENST00000482928 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.88■□□□□ 0.29
TSPAN1-208ENST00000482928 MARF1Q9Y4F3 1742 aaKnown RBP16.88■□□□□ 0.29
TSPAN1-208ENST00000482928 YTHDC1Q96MU7 727 aaKnown RBP16.88■□□□□ 0.29
TSPAN1-208ENST00000482928 CABP1Q9NZU7 370 aa16.88■□□□□ 0.29
TSPAN1-208ENST00000482928 CCDC61Q9Y6R9 512 aa16.88■□□□□ 0.29
TSPAN1-208ENST00000482928 GLI3P10071 1580 aa16.88■□□□□ 0.29
TSPAN1-208ENST00000482928 CGNL1Q0VF96 1302 aa16.88■□□□□ 0.29
TSPAN1-208ENST00000482928 MYBBP1AQ9BQG0 1328 aaKnown RBP16.88■□□□□ 0.29
TSPAN1-208ENST00000482928 ATP7BP35670 1465 aa16.87■□□□□ 0.29
TSPAN1-208ENST00000482928 MRS2Q9HD23 443 aa16.87■□□□□ 0.29
TSPAN1-208ENST00000482928 C19orf44Q9H6X5 657 aa16.86■□□□□ 0.29
TSPAN1-208ENST00000482928 A0A1W2PP64 1363 aa16.86■□□□□ 0.29
TSPAN1-208ENST00000482928 NPC1L1Q9UHC9 1359 aa16.86■□□□□ 0.29
TSPAN1-208ENST00000482928 NUTM2FA1L443 756 aa16.85■□□□□ 0.29
TSPAN1-208ENST00000482928 PARD3Q8TEW0 1356 aa16.85■□□□□ 0.29
TSPAN1-208ENST00000482928 ITSN1Q15811 1721 aa16.84■□□□□ 0.29
TSPAN1-208ENST00000482928 EN1Q05925 392 aaPredicted RBP16.84■□□□□ 0.29
TSPAN1-208ENST00000482928 AMER1Q5JTC6 1135 aaPredicted RBP16.84■□□□□ 0.29
TSPAN1-208ENST00000482928 CARD14Q9BXL6 1004 aa16.84■□□□□ 0.29
TSPAN1-208ENST00000482928 ADGRL3Q9HAR2 1447 aa16.84■□□□□ 0.29
TSPAN1-208ENST00000482928 CDC42BPGQ6DT37 1551 aa16.84■□□□□ 0.29
TSPAN1-208ENST00000482928 USP32Q8NFA0 1604 aa16.84■□□□□ 0.29
TSPAN1-208ENST00000482928 NSD2O96028 1365 aa16.83■□□□□ 0.28
TSPAN1-208ENST00000482928 ANKARQ7Z5J8 1434 aa16.83■□□□□ 0.28
TSPAN1-208ENST00000482928 NALCNQ8IZF0 1738 aa16.83■□□□□ 0.28
TSPAN1-208ENST00000482928 MORC1Q86VD1 984 aa16.82■□□□□ 0.28
TSPAN1-208ENST00000482928 NLRP13Q86W25 1043 aa16.82■□□□□ 0.28
TSPAN1-208ENST00000482928 ZNF692Q9BU19 519 aaPredicted RBP16.81■□□□□ 0.28
TSPAN1-208ENST00000482928 FMN2Q9NZ56 1722 aa16.81■□□□□ 0.28
TSPAN1-208ENST00000482928 UTRNP46939 3433 aa16.81■□□□□ 0.28
TSPAN1-208ENST00000482928 BRD4O60885 1362 aaPredicted RBP16.8■□□□□ 0.28
TSPAN1-208ENST00000482928 PRR36Q9H6K5 1346 aa16.8■□□□□ 0.28
TSPAN1-208ENST00000482928 DDX17Q92841 729 aaKnown RBP16.8■□□□□ 0.28
TSPAN1-208ENST00000482928 TOPAZ1Q8N9V7 1692 aa16.8■□□□□ 0.28
TSPAN1-208ENST00000482928 NGDNQ8NEJ9 315 aaKnown RBP16.79■□□□□ 0.28
TSPAN1-208ENST00000482928 CD163L1Q9NR16 1453 aa16.78■□□□□ 0.28
TSPAN1-208ENST00000482928 EDC4Q6P2E9 1401 aaKnown RBP16.78■□□□□ 0.28
TSPAN1-208ENST00000482928 TNS1Q9HBL0 1735 aaKnown RBP16.77■□□□□ 0.28
TSPAN1-208ENST00000482928 PLEKHG3A1L390 1219 aa16.77■□□□□ 0.28
TSPAN1-208ENST00000482928 CENPBP07199 599 aaPredicted RBP16.77■□□□□ 0.28
TSPAN1-208ENST00000482928 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.77■□□□□ 0.28
TSPAN1-208ENST00000482928 COL22A1Q8NFW1 1626 aaPredicted RBP16.77■□□□□ 0.27
TSPAN1-208ENST00000482928 AKAP12Q02952 1782 aa16.77■□□□□ 0.27
TSPAN1-208ENST00000482928 ACEP12821 1306 aa16.76■□□□□ 0.27
TSPAN1-208ENST00000482928 KIF20BQ96Q89 1820 aa16.76■□□□□ 0.27
TSPAN1-208ENST00000482928 SEPT12Q8IYM1 358 aa16.76■□□□□ 0.27
TSPAN1-208ENST00000482928 FAM9BQ8IZU0 186 aa16.76■□□□□ 0.27
TSPAN1-208ENST00000482928 SPON1Q9HCB6 807 aa16.76■□□□□ 0.27
TSPAN1-208ENST00000482928 DCCP43146 1447 aa16.76■□□□□ 0.27
TSPAN1-208ENST00000482928 CPSF1Q10570 1443 aaKnown RBP16.76■□□□□ 0.27
TSPAN1-208ENST00000482928 PPP2R1AP30153 589 aa16.75■□□□□ 0.27
TSPAN1-208ENST00000482928 PRELPP51888 382 aa16.75■□□□□ 0.27
TSPAN1-208ENST00000482928 KRT27Q7Z3Y8 459 aa16.75■□□□□ 0.27
TSPAN1-208ENST00000482928 PMFBP1Q8TBY8 1022 aa16.75■□□□□ 0.27
TSPAN1-208ENST00000482928 MST1RQ04912 1400 aa16.75■□□□□ 0.27
TSPAN1-208ENST00000482928 MON2Q7Z3U7 1717 aa16.75■□□□□ 0.27
TSPAN1-208ENST00000482928 TNNT2P45379 298 aaPredicted RBP16.73■□□□□ 0.27
TSPAN1-208ENST00000482928 CCDC184Q52MB2 194 aa16.73■□□□□ 0.27
TSPAN1-208ENST00000482928 GGNBP2Q9H3C7 697 aa16.73■□□□□ 0.27
TSPAN1-208ENST00000482928 PHF8Q9UPP1 1060 aa16.73■□□□□ 0.27
TSPAN1-208ENST00000482928 ANKRD26Q9UPS8 1709 aa16.73■□□□□ 0.27
TSPAN1-208ENST00000482928 RGPD8O14715 1765 aaPredicted RBP16.72■□□□□ 0.27
TSPAN1-208ENST00000482928 ESCO1Q5FWF5 840 aa16.72■□□□□ 0.27
TSPAN1-208ENST00000482928 DISP2A7MBM2 1401 aa16.71■□□□□ 0.27
TSPAN1-208ENST00000482928 FYB1O15117 783 aa16.71■□□□□ 0.27
TSPAN1-208ENST00000482928 COG3Q96JB2 828 aa16.71■□□□□ 0.27
TSPAN1-208ENST00000482928 CFAP53Q96M91 514 aa16.71■□□□□ 0.27
TSPAN1-208ENST00000482928 USP6P35125 1406 aa16.7■□□□□ 0.26
TSPAN1-208ENST00000482928 POLR3AO14802 1390 aaPredicted RBP16.7■□□□□ 0.26
TSPAN1-208ENST00000482928 WDR43Q15061 677 aaKnown RBP eCLIP16.7■□□□□ 0.26
TSPAN1-208ENST00000482928 TTC21AQ8NDW8 1320 aa16.7■□□□□ 0.26
TSPAN1-208ENST00000482928 KCNQ2O43526 872 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms