RNA–Protein interactions for RNA: ENST00000482173.5

CHPF2-203, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 4

Gene CHPF2, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-203ENST00000482173 ATP7BP35670 1465 aa28.08■■■□□ 2.09
CHPF2-203ENST00000482173 ITSN1Q15811 1721 aa28.06■■■□□ 2.08
CHPF2-203ENST00000482173 KRT27Q7Z3Y8 459 aa28.06■■■□□ 2.08
CHPF2-203ENST00000482173 A0A0G2JS52 829 aa28.05■■■□□ 2.08
CHPF2-203ENST00000482173 MYT1Q01538 1121 aa28.05■■■□□ 2.08
CHPF2-203ENST00000482173 NBPF1Q3BBV0 1214 aa28.05■■■□□ 2.08
CHPF2-203ENST00000482173 COL14A1Q05707 1796 aaKnown RBP28.04■■■□□ 2.08
CHPF2-203ENST00000482173 NRAPQ86VF7 1730 aa28.04■■■□□ 2.08
CHPF2-203ENST00000482173 KIAA1210Q9ULL0 1709 aa28.04■■■□□ 2.08
CHPF2-203ENST00000482173 FAM98CQ17RN3 349 aaKnown RBP28.03■■■□□ 2.08
CHPF2-203ENST00000482173 SF3B2Q13435 895 aaKnown RBP28.02■■■□□ 2.08
CHPF2-203ENST00000482173 PRDM11Q9NQV5 511 aa28.02■■■□□ 2.08
CHPF2-203ENST00000482173 CCDC61Q9Y6R9 512 aa28.02■■■□□ 2.08
CHPF2-203ENST00000482173 DEFB132Q7Z7B7 95 aa28■■■□□ 2.07
CHPF2-203ENST00000482173 ACEP12821 1306 aa27.99■■■□□ 2.07
CHPF2-203ENST00000482173 CRYBG1Q9Y4K1 1723 aa27.99■■■□□ 2.07
CHPF2-203ENST00000482173 NBPF8Q3BBV2 869 aa27.99■■■□□ 2.07
CHPF2-203ENST00000482173 NUTM2GQ5VZR2 741 aa27.98■■■□□ 2.07
CHPF2-203ENST00000482173 PLEKHG3A1L390 1219 aa27.97■■■□□ 2.07
CHPF2-203ENST00000482173 POLR3AO14802 1390 aaPredicted RBP27.97■■■□□ 2.07
CHPF2-203ENST00000482173 SPATA31A5Q5VU36 1347 aa27.96■■■□□ 2.07
CHPF2-203ENST00000482173 SPATA31A7Q8IWB4 1347 aa27.96■■■□□ 2.07
CHPF2-203ENST00000482173 KIAA0232Q92628 1395 aa27.96■■■□□ 2.07
CHPF2-203ENST00000482173 ZC3H6P61129 1189 aaKnown RBP27.94■■■□□ 2.06
CHPF2-203ENST00000482173 CHRNA2Q15822 529 aa27.94■■■□□ 2.06
CHPF2-203ENST00000482173 TOPAZ1Q8N9V7 1692 aa27.94■■■□□ 2.06
CHPF2-203ENST00000482173 CENPJQ9HC77 1338 aaPredicted RBP27.93■■■□□ 2.06
CHPF2-203ENST00000482173 SRPK2P78362 688 aaKnown RBP27.93■■■□□ 2.06
CHPF2-203ENST00000482173 ABTB2Q8N961 1025 aa27.91■■■□□ 2.06
CHPF2-203ENST00000482173 PHRF1Q9P1Y6 1649 aaKnown RBP27.9■■■□□ 2.06
CHPF2-203ENST00000482173 L3MBTL2Q969R5 705 aa27.9■■■□□ 2.06
CHPF2-203ENST00000482173 STRN4Q9NRL3 753 aa27.9■■■□□ 2.06
CHPF2-203ENST00000482173 CABP2Q9NPB3 220 aa27.89■■■□□ 2.06
CHPF2-203ENST00000482173 FAM182BQ5T319 152 aa27.88■■■□□ 2.05
CHPF2-203ENST00000482173 PPIP5K1Q6PFW1 1433 aa27.87■■■□□ 2.05
CHPF2-203ENST00000482173 BAG6P46379 1132 aa27.87■■■□□ 2.05
CHPF2-203ENST00000482173 SPATA31A1Q5TZJ5 1347 aa27.87■■■□□ 2.05
CHPF2-203ENST00000482173 SIN3AQ96ST3 1273 aa27.86■■■□□ 2.05
CHPF2-203ENST00000482173 SRCAPQ6ZRS2 3230 aa27.86■■■□□ 2.05
CHPF2-203ENST00000482173 EVA1CP58658 441 aa27.85■■■□□ 2.05
CHPF2-203ENST00000482173 NLRP13Q86W25 1043 aa27.83■■■□□ 2.05
CHPF2-203ENST00000482173 THSD7AQ9UPZ6 1657 aa27.83■■■□□ 2.05
CHPF2-203ENST00000482173 QRICH2Q9H0J4 1663 aa27.81■■■□□ 2.04
CHPF2-203ENST00000482173 NEUROD1Q13562 356 aa27.81■■■□□ 2.04
CHPF2-203ENST00000482173 CABP1Q9NZU7 370 aa27.81■■■□□ 2.04
CHPF2-203ENST00000482173 USP35Q9P2H5 1018 aa27.81■■■□□ 2.04
CHPF2-203ENST00000482173 USP19O94966 1318 aa27.8■■■□□ 2.04
CHPF2-203ENST00000482173 NRKQ7Z2Y5 1582 aa27.79■■■□□ 2.04
CHPF2-203ENST00000482173 CPDO75976 1380 aa27.78■■■□□ 2.04
CHPF2-203ENST00000482173 GCP02774 474 aa27.78■■■□□ 2.04
CHPF2-203ENST00000482173 EN1Q05925 392 aaPredicted RBP27.78■■■□□ 2.04
CHPF2-203ENST00000482173 SSH2Q76I76 1423 aa27.77■■■□□ 2.04
CHPF2-203ENST00000482173 BRD4O60885 1362 aaPredicted RBP27.77■■■□□ 2.04
CHPF2-203ENST00000482173 LARP1Q6PKG0 1096 aaKnown RBP27.77■■■□□ 2.04
CHPF2-203ENST00000482173 CAMTA1Q9Y6Y1 1673 aa27.77■■■□□ 2.04
CHPF2-203ENST00000482173 RGPD1P0DJD0 1748 aa27.76■■■□□ 2.03
CHPF2-203ENST00000482173 EVC2Q86UK5 1308 aa27.75■■■□□ 2.03
CHPF2-203ENST00000482173 BARGINQ6ZT62 677 aa27.75■■■□□ 2.03
CHPF2-203ENST00000482173 NLRP6P59044 892 aa27.74■■■□□ 2.03
CHPF2-203ENST00000482173 FAM196AQ6ZSG2 479 aa27.74■■■□□ 2.03
CHPF2-203ENST00000482173 TRPM1Q7Z4N2 1603 aa27.74■■■□□ 2.03
CHPF2-203ENST00000482173 USP6P35125 1406 aa27.73■■■□□ 2.03
CHPF2-203ENST00000482173 PSDA5PKW4 1024 aaPredicted RBP27.72■■■□□ 2.03
CHPF2-203ENST00000482173 TCP11L2Q8N4U5 519 aa27.72■■■□□ 2.03
CHPF2-203ENST00000482173 ROCK2O75116 1388 aaKnown RBP27.72■■■□□ 2.03
CHPF2-203ENST00000482173 LMO7Q8WWI1 1683 aa27.72■■■□□ 2.03
CHPF2-203ENST00000482173 ZBTB7CA1YPR0 619 aa27.71■■■□□ 2.03
CHPF2-203ENST00000482173 TRIM37O94972 964 aa27.71■■■□□ 2.03
CHPF2-203ENST00000482173 PDE3BQ13370 1112 aa27.71■■■□□ 2.03
CHPF2-203ENST00000482173 DISP2A7MBM2 1401 aa27.67■■■□□ 2.02
CHPF2-203ENST00000482173 TNS1Q9HBL0 1735 aaKnown RBP27.67■■■□□ 2.02
CHPF2-203ENST00000482173 EZH2Q15910 746 aaKnown RBP27.67■■■□□ 2.02
CHPF2-203ENST00000482173 THRAP3Q9Y2W1 955 aaKnown RBP27.67■■■□□ 2.02
CHPF2-203ENST00000482173 COL5A2P05997 1499 aaPredicted RBP27.65■■■□□ 2.02
CHPF2-203ENST00000482173 ZNF692Q9BU19 519 aaPredicted RBP27.65■■■□□ 2.02
CHPF2-203ENST00000482173 APBA3O96018 575 aa27.64■■■□□ 2.02
CHPF2-203ENST00000482173 CAMKK2Q96RR4 588 aa27.63■■■□□ 2.01
CHPF2-203ENST00000482173 SLIT3O75094 1523 aa27.62■■■□□ 2.01
CHPF2-203ENST00000482173 AATKQ6ZMQ8 1374 aa27.62■■■□□ 2.01
CHPF2-203ENST00000482173 R3HDM1Q15032 1099 aaKnown RBP27.62■■■□□ 2.01
CHPF2-203ENST00000482173 TTC21BQ7Z4L5 1316 aa27.62■■■□□ 2.01
CHPF2-203ENST00000482173 PIK3C2AO00443 1686 aa27.61■■■□□ 2.01
CHPF2-203ENST00000482173 CRB1P82279 1406 aa27.6■■■□□ 2.01
CHPF2-203ENST00000482173 LRP5O75197 1615 aa27.59■■■□□ 2.01
CHPF2-203ENST00000482173 TOM1L2Q6ZVM7 507 aa27.57■■■□□ 2
CHPF2-203ENST00000482173 KCNH5Q8NCM2 988 aa27.56■■■□□ 2
CHPF2-203ENST00000482173 AXIN2Q9Y2T1 843 aa27.56■■■□□ 2
CHPF2-203ENST00000482173 TTC21AQ8NDW8 1320 aa27.56■■■□□ 2
CHPF2-203ENST00000482173 PARD3Q8TEW0 1356 aa27.56■■■□□ 2
CHPF2-203ENST00000482173 AKAP12Q02952 1782 aa27.55■■■□□ 2
CHPF2-203ENST00000482173 SOX12O15370 315 aa27.55■■■□□ 2
CHPF2-203ENST00000482173 ARHGEF25Q86VW2 580 aa27.55■■■□□ 2
CHPF2-203ENST00000482173 PARP4Q9UKK3 1724 aaKnown RBP27.55■■■□□ 2
CHPF2-203ENST00000482173 COL18A1P39060 1754 aa27.54■■■□□ 2
CHPF2-203ENST00000482173 CPSF1Q10570 1443 aaKnown RBP27.54■■■□□ 2
CHPF2-203ENST00000482173 KTN1Q86UP2 1357 aaKnown RBP27.54■■■□□ 2
CHPF2-203ENST00000482173 CARD11Q9BXL7 1154 aa27.54■■■□□ 2
CHPF2-203ENST00000482173 C11orf95C9JLR9 678 aaPredicted RBP27.52■■■□□ 2
CHPF2-203ENST00000482173 WDR17Q8IZU2 1322 aa27.51■■□□□ 1.99
CHPF2-203ENST00000482173 DDB1Q16531 1140 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms